Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g1608 ATGATGAAGCTTCCTTCATATTACATTCTGCTGCTCCTGTCTGTGCTTTCTCATTCCCTCCATTGTTGCTGCCAGAGTGACCTTGCCACCATTACAAAATGCACTTTCGACGACACAAGAAAACTAGGACAAAACTGCAACAGCCTTCAAAAGTCATGTACCTCCTTTGTAACGTTCAGATCCAATCCTCCCTATAACACCTCTCTAAGCATTGCCAATCTTCTTGGCTCTGAAGCATCTTCCATAGCCTCCATCAACAACATACCAAGCAACACCAACCACATTCCTTCCAATCAAGTTGTTATTGTTCCAATTGATTGTTCCTGTTTGGGTGGTATCTACCAGCATGTCGTTTCTTATACAGTGAAGAAATATGACACCTTCTTTCAGGTGGCCAACGATACTTATCAAGGCCTCTCCATTTGCCAGATGATACTCCGGCAAAATTACGCAGCTTACGCCGTCAGTCTCAATGTTGGTGAAGAGATTTCAGTTCCCATCTTGTGTGCTTGTCCCGCTGCTGACCAAATCTCAGATGGGGTCTCCTCTCTGCTAGTTCACTCAATTTCCTTTGGGGAGTCACCTAACTTAATCGCAAAGGCCTATGGTGTGAATCTACAGACTCTGTTGACTGCTAACCAGTTGAGTTCAAACGCCCCTATCTATCCCTTCACAACTCTCTTAGTTCCCCTCAAGCCCTCCTCTTGTAAACCCAATCAGCATTTATTCTACTGCACCTGTTCATTCTCCCAGAAATACCTTCCAAATTCAAGTTTCAACACTCTTGCTTGTGATCATATTCAAACTGATGCTCATCATTTCCCCGTCAAATTGGTTGCTTCTTTAGGTGTTGGTATCGGTGTTGGCCTTCTGAGCTTATTTCTTTTGGGTCACAAGTTATATCAATACCTAAGACAAAAACAAGAAAGAGTACGAAAGGAAAAATTGTTCAAGCAAAATGGTGGCCACTTGCTACAAGAAAAGATGTCATGTTATGGAAACGGAGACAAAGCAAGACTTTTTACTGCGGAAGAGCTGGAACGAGCAACAGATAACTACAATCAAAGTAGGTTTCTTGGTCAAGGTGGTTTCGGAACTGTTTATAAAGGAATGTTACCAGATGGTACCATTGTTGCAGTTAAGAAGGCGAAAGAAATTGTGAGAAGCCAGATTGAGACTTTCATTAATGAAGTGGTGATTCTATCCCAAATAAACCACAGGAACATCGTCAAACTCTTGGGTTGGTGCCTAGAGACTGAAGCCCCATTATTAGTATATGAATTTATTCCCAATGGAACACTTTCTCACCACATCCATAACCAGGAACTTGAAGGAAAGCTTTCATGGGACACCCGCCTCAGAATTTCTTGTGAGGTTGCTGGGGCAGTGGCCTATATGCATTCTGCAGCTTCCATTCCTGTTTTCCACAGAGACATCAAGACTTCCAACATACTCCTGGATCATAAGTACAGTGCCAAAGTATCTGATTTTGGGACTTCAAGATCAGTTCCAGATGATAGGACTCACTTAACCACAGTGGTACAAGGCACTTTTGGGAACATTGATCCTGAGTACTTCCAATCCAGTCAATTCACAGATAAAAGTGATGTATATAGTTTTGGGGTTGTACTTATAGAACTCATTTCTGGAAGGAAACCCATTACCTTCTCGGACGAAGATCAAGGTCGGAACCTTGTCGCAGAATTTATTGCTTTGATGAAGGAGGACCGAGTTTTTGAGATTTTAGATGCTAGAGTTGTTCATGAAGGAAGGAAAGATGATATTCTTAGTGTCGTGAATCTAGCAAAGAGATGTGTGAGACTCAATGGGAAGAAGAGACCCACAATGCAAGAGGTTTCAGCAGAGTTAGAAGGACTGGGAAAGACACAAAATTCTTTAGAGATCACTGATTGTTCTCTTGAGGTTTCACATAAATCAGCTATGTGTGTCACTCCTTCTGAATCAGACCAAGAATCCACAGAAGAAAGCATGTCATCGATTTTTCAAATAGACTCCACACCCATCTGA 2028 0.4206 MMKLPSYYILLLLSVLSHSLHCCCQSDLATITKCTFDDTRKLGQNCNSLQKSCTSFVTFRSNPPYNTSLSIANLLGSEASSIASINNIPSNTNHIPSNQVVIVPIDCSCLGGIYQHVVSYTVKKYDTFFQVANDTYQGLSICQMILRQNYAAYAVSLNVGEEISVPILCACPAADQISDGVSSLLVHSISFGESPNLIAKAYGVNLQTLLTANQLSSNAPIYPFTTLLVPLKPSSCKPNQHLFYCTCSFSQKYLPNSSFNTLACDHIQTDAHHFPVKLVASLGVGIGVGLLSLFLLGHKLYQYLRQKQERVRKEKLFKQNGGHLLQEKMSCYGNGDKARLFTAEELERATDNYNQSRFLGQGGFGTVYKGMLPDGTIVAVKKAKEIVRSQIETFINEVVILSQINHRNIVKLLGWCLETEAPLLVYEFIPNGTLSHHIHNQELEGKLSWDTRLRISCEVAGAVAYMHSAASIPVFHRDIKTSNILLDHKYSAKVSDFGTSRSVPDDRTHLTTVVQGTFGNIDPEYFQSSQFTDKSDVYSFGVVLIELISGRKPITFSDEDQGRNLVAEFIALMKEDRVFEILDARVVHEGRKDDILSVVNLAKRCVRLNGKKRPTMQEVSAELEGLGKTQNSLEITDCSLEVSHKSAMCVTPSESDQESTEESMSSIFQIDSTPI 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g1608 675 CDD STKc_IRAK 359 626 - -
Alju04g1608 675 Pfam LysM domain 191 230 IPR018392 -
Alju04g1608 675 CDD LysM 192 229 IPR018392 -
Alju04g1608 675 MobiDBLite consensus disorder prediction 652 675 - -
Alju04g1608 675 ProSitePatterns Serine/Threonine protein kinases active-site signature. 474 486 IPR008271 GO:0004672|GO:0006468
Alju04g1608 675 Pfam Protein tyrosine and serine/threonine kinase 356 623 IPR001245 GO:0004672|GO:0006468
Alju04g1608 675 FunFam Wall-associated receptor kinase 2 324 428 - -
Alju04g1608 675 SMART LysM_2 119 166 IPR018392 -
Alju04g1608 675 SMART LysM_2 186 230 IPR018392 -
Alju04g1608 675 Gene3D LysM domain 178 240 IPR036779 -
Alju04g1608 675 ProSiteProfiles LysM domain profile. 185 229 IPR018392 -
Alju04g1608 675 ProSiteProfiles Protein kinase domain profile. 353 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g1608 675 SUPERFAMILY Protein kinase-like (PK-like) 337 623 IPR011009 -
Alju04g1608 675 SMART serkin_6 353 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g1608 675 Gene3D Phosphorylase Kinase; domain 1 326 428 - -
Alju04g1608 675 Gene3D Transferase(Phosphotransferase) domain 1 429 646 - -
Alju04g1608 675 ProSitePatterns Protein kinases ATP-binding region signature. 359 382 IPR017441 GO:0005524
Alju04g1608 675 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 99 629 IPR045274 GO:0007166
Alju04g1608 675 FunFam Wall-associated receptor kinase 2 429 646 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g1608 Alju-ChrAlju04 38887445 38890687 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g1608 283 624 Receptor kinase-like Gene Family AT1G16130 56.977 5.12e-134 410
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Alju04g1608 PK_Tyr_Ser-Thr 2.9e-48 CL0016