Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g1607 ATGAGGCTTCCTTCTTTTTACCTTCAGCTCCTGTCTCTGCTTTCTGCAACGACAATCCACCATTGTTTCTGTCAACAAGAATACCTAAACAACACAGTCTATAACTGCACTTTCAACCTCACAAAGAAAGCTGGATATGTCTGCAATGGCCTCCAGAAGTCATCATCATGCACTTCCTTTGTAACTTTCAGATCAACCCCTCCTTCTTATGACACCCCTCTTACCATTTCCAATCTCCTTGGCTCTGAACCATCTTCCATAGCCTCCATCAACAACAACATCTCAATCAACAGCAACAACAAGAAGATTCCTTCGAATCGAACCGTGATTGTTCCGGTCTATTGTTCATGTTCAGGCAATCTCTACCAGCATGCTACTTCTTATGAAATGAAAAAAGGAGATTACTACTTCAAATTAGCCAACCAGACTTATCAAGGCCTTGTCAATTGCCAGATGTTAGTACGTCAGAATTATTACCTTCCTGAAAATATCAGTATTGGTGCCCAAGTTTCAGTTCCAGTTTTGTGTGCTTGTCCCACGGCGAAACAGATCCAAGATGGAGTCTCCTATTTGCTGGTTCATACACTTGATTATGGGGATTCACTGCAATCAGTTGCAGAGTCCTATGGTGTGGATCAGCACAGTTTGATGGCTGCTAATGAGTTAACTTCAAATGAAACTGTTTCTGCTTTCACTCCTATTTTAGTTCCCCTCAAGCCATCTTCTTGTAAACTCAATCCACATTTGTTCTATTGCACTTGTTCGTTCTCTCAGCTTTATCATTCGAATTCAAGTTTCAATAATCTCAGTTGTGGTCATCTTCAACCTGATGCTCATCGTTTCCCTGTTAAATTGGTTGCTTCCATAGGTGTTGGTACTGGTGCCGGCTTTTTGTGCTTATTTCTTTTGGGTTACAAGCTACATCAATTCATCAAACAAAAACAAGAAAAAGTTCGTAAGGAAAAATTGTTTAGGCAAAATGGTGGCCTTTTGCTGCAAGAAAAGATGTCAAATTATGGAAATAGAGACAGCACAAAACTTTTCACAGCAGAAGAACTGGAACGAGCAACAGATAGCTACAATCAAAGTAGGTTTCTTGGTCAAGGTGGGTATGGAACTGTTTATAAAGGAATGCTACCAGATGGTACCATTGTTGCAGTTAAGAAGTCAAGAGAAATTGCAAGAAACCAGATTGAGACATTTGTTAATGAAGTTGTTATTCTGTCCCAAATAAACCACAGGAACATTGTCAAACTCCTAGGTTGTTGCCTAGAGACTGAAAACCCATTGTTAGTTTATGAGTTTATTCCCAATGGAACACTCTCTCAGCACATCCATAACAAGGAACTCAAATCAAACCTCTCATGGGACAACCGATTTAGAATCGCTTGTGAGGTTGCTGGGGCGGTGGCGTATATGCATTTCGCAGCTTCCATTCCCATCTTCCATAGAGACATCAAAACTTCCAACATACTTCTGGATCATAATTACAATGCCAAAGTTTCTGATTTTGGGTCTTCCAGATCAGTTCCAAATGATAGGACTCACTTAACCACAGTGGTACAAGGCACTTTTGGGTACATTGATCCTGTATACTTTCAAACAAGCCAATTCACAGATAAAAGTGATGTGTATAGTTTCGGGGTTGTACTTGTAGAGCTCATTACTGGAAGAAAACCCTTTTTGGAACAAGCTGAGGGGCAAAATCTTGTTGCAGATTTCATTTCTTTGATGAAGAATGACCGAGTTTTCGAGATTTTAGATGCAAGAGTTGTTCATGAAGGAGGGGAAGATAATATTCGTGGCATTGCAAATCTTGCAATGAGATGTTTGAGACTAAACAGGAAGAAGAGACCCACAATGAGAGAGGTTTCAGCAGAGCTTGAAGCAAAGAGAAAGACACAAAATGCCTTAGAGATCACTGAATGTTCTCATGAGTTTCCAAATGATAAGGACACCAGCTCTTCTTTTGAAACAATCCAAGAATCCACAGAAGAAAGCATGTCATTATTTCTCCAAATGGATTCCACATCCTTCTGA 2040 0.4005 MRLPSFYLQLLSLLSATTIHHCFCQQEYLNNTVYNCTFNLTKKAGYVCNGLQKSSSCTSFVTFRSTPPSYDTPLTISNLLGSEPSSIASINNNISINSNNKKIPSNRTVIVPVYCSCSGNLYQHATSYEMKKGDYYFKLANQTYQGLVNCQMLVRQNYYLPENISIGAQVSVPVLCACPTAKQIQDGVSYLLVHTLDYGDSLQSVAESYGVDQHSLMAANELTSNETVSAFTPILVPLKPSSCKLNPHLFYCTCSFSQLYHSNSSFNNLSCGHLQPDAHRFPVKLVASIGVGTGAGFLCLFLLGYKLHQFIKQKQEKVRKEKLFRQNGGLLLQEKMSNYGNRDSTKLFTAEELERATDSYNQSRFLGQGGYGTVYKGMLPDGTIVAVKKSREIARNQIETFVNEVVILSQINHRNIVKLLGCCLETENPLLVYEFIPNGTLSQHIHNKELKSNLSWDNRFRIACEVAGAVAYMHFAASIPIFHRDIKTSNILLDHNYNAKVSDFGSSRSVPNDRTHLTTVVQGTFGYIDPVYFQTSQFTDKSDVYSFGVVLVELITGRKPFLEQAEGQNLVADFISLMKNDRVFEILDARVVHEGGEDNIRGIANLAMRCLRLNRKKRPTMREVSAELEAKRKTQNALEITECSHEFPNDKDTSSSFETIQESTEESMSLFLQMDSTSF 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g1607 679 SUPERFAMILY Protein kinase-like (PK-like) 341 628 IPR011009 -
Alju04g1607 679 FunFam Wall-associated receptor kinase 2 330 435 - -
Alju04g1607 679 FunFam Wall-associated receptor kinase 2 436 650 - -
Alju04g1607 679 Gene3D Phosphorylase Kinase; domain 1 328 435 - -
Alju04g1607 679 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 128 634 IPR045274 GO:0007166
Alju04g1607 679 Pfam Protein kinase domain 360 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g1607 679 CDD LysM 193 225 IPR018392 -
Alju04g1607 679 SMART serkin_6 360 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g1607 679 Gene3D Transferase(Phosphotransferase) domain 1 436 653 - -
Alju04g1607 679 Pfam LysM domain 194 237 IPR018392 -
Alju04g1607 679 CDD STKc_IRAK 366 629 - -
Alju04g1607 679 ProSitePatterns Serine/Threonine protein kinases active-site signature. 481 493 IPR008271 GO:0004672|GO:0006468
Alju04g1607 679 Gene3D LysM domain 188 245 IPR036779 -
Alju04g1607 679 SMART LysM_2 193 237 IPR018392 -
Alju04g1607 679 ProSitePatterns Protein kinases ATP-binding region signature. 366 389 IPR017441 GO:0005524
Alju04g1607 679 ProSiteProfiles Protein kinase domain profile. 360 648 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g1607 679 ProSiteProfiles LysM domain profile. 192 236 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g1607 Alju-ChrAlju04 38881235 38884077 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g1607 290 635 Receptor kinase-like Gene Family AT1G16130 55.143 9.97e-131 401
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Alju04g1607 Pkinase 1.3e-49 CL0016