Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g1591 ATGGGTGAAGAATTTGAAGCTGGGATTTGTGGTGGGAATAATATTAATAATAATTACTGTTGGATCAACAACGACAACAACAACAACAATATGATGATGATGATGAACTCAACAACAACGAGAAGTGTTTTTCCTTTGATGATGAGTTCATCTCCTTGTTCTGTTCTCACAGCTAACAACGATCTCTCTGGAGGAGGTATGATCAGCTACAGCTCATGGCAGACCGATACGGTGGACTTGAAGGCCCCGGCCGCGGCGGGGACGGCCACGGCAACCTCTTGTTCTGATATCTCTCTGGGGTTTCTCGATGCTGCGACGACGACCGCGGCCACGACGAAGCCGCTGCTTCAGAATCATCTTCATCATCATCATCCTGATGAAGCTGACAATAATAATAATCATCATAGTAATGGTTCTATCTTGATGGATTCTTCTTCCTTGGATATGATCATGGCTTGGAATAACTCTCTCTTCGGTAATTCTTCTACACAAAGCCAAGATCAGAAGAGAGAGATGTCCACAAAGAATCAAGATTTATGTGGTGGTGGTAACAATAATTTCTCAATTGGGTCATATGATATTAATAATTGTTCAAGTTCTTCATCAACGTTGATTCAAAGTCTGTATGATATTAATAATAATCCTCAGCCACAACAGCCACTTTTCACCAACCCACCATCTAATTCCATGGCCTATTCTTCAAGTTCACCAAATAATTACGGTGCCATATCTAATTCCACTACTACTGATCAATTTACCACTACCACTTCTTCGTCGTCTTCGACTTCGTCTTCATCTTCTTTATGGTCCAGACCCTCTAATGGTGGTGGCTTGCACTTCTCCAACTGTACTCCTTTCTGGAATGCTTCTGCTGAAACCCCACATCATGTTTTTGCTCCTTCTTTAATCTCTGAGAAACCCAATTTCACCAGCTCTCTCATACCCAAGCCCAAGAGAGAAGAAGCTTCGGACTCGGCAAAGAAATTTTCATGTGAACCTGCAATCAAGAAGCAAAGAATTGAAACCCCATCTCCATTACCTACTTTTAAGGTTCGGAAAGAGAAGCTGGGGGACCGAATCACTGCTCTTCAGCAATTGGTGTCACCTTTTGGAAAGACTGATACTGCATCTGTTCTTCACGAAGCCATTGAGTACATCAAGTTCCTGCATGATCAAGTCAGTGTTTTGAGCACTCCTTATATGAAAAATGGAGTTCCCATCCAACACTGCCAACAGGGTTGTGATGTGAAGGAGTTATCAGAAGGGCCAAAACAAGACTTGAGAAGCAGAGGGCTGTGTTTGGTTCCGATTTCAAGCACATTCCCAGTCACAAACGAAACCCCTGTGGATTTCTGGACACCATCATTTGGAGGCACACTCATCAGATAA 1389 0.4291 MGEEFEAGICGGNNINNNYCWINNDNNNNNMMMMMNSTTTRSVFPLMMSSSPCSVLTANNDLSGGGMISYSSWQTDTVDLKAPAAAGTATATSCSDISLGFLDAATTTAATTKPLLQNHLHHHHPDEADNNNNHHSNGSILMDSSSLDMIMAWNNSLFGNSSTQSQDQKREMSTKNQDLCGGGNNNFSIGSYDINNCSSSSSTLIQSLYDINNNPQPQQPLFTNPPSNSMAYSSSSPNNYGAISNSTTTDQFTTTTSSSSSTSSSSSLWSRPSNGGGLHFSNCTPFWNASAETPHHVFAPSLISEKPNFTSSLIPKPKREEASDSAKKFSCEPAIKKQRIETPSPLPTFKVRKEKLGDRITALQQLVSPFGKTDTASVLHEAIEYIKFLHDQVSVLSTPYMKNGVPIQHCQQGCDVKELSEGPKQDLRSRGLCLVPISSTFPVTNETPVDFWTPSFGGTLIR 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g1591 462 MobiDBLite consensus disorder prediction 309 328 - -
Alju04g1591 462 MobiDBLite consensus disorder prediction 160 180 - -
Alju04g1591 462 CDD bHLH_AtbHLH_like 346 397 IPR045239 -
Alju04g1591 462 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 340 389 IPR011598 GO:0046983
Alju04g1591 462 MobiDBLite consensus disorder prediction 210 271 - -
Alju04g1591 462 MobiDBLite consensus disorder prediction 121 141 - -
Alju04g1591 462 FunFam Transcription factor bHLH123 family 350 412 - -
Alju04g1591 462 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 350 408 IPR036638 GO:0046983
Alju04g1591 462 Gene3D - 350 403 IPR036638 GO:0046983
Alju04g1591 462 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 136 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g1591 Alju-ChrAlju04 38306711 38310284 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g1591 281 462 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G61660 56.915 2.77e-56 190