Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g1579 ATGAGGTATAAGATCGAACCGAGAGGCTATCCTCAGTTCTTTGTCTATAGAAACGAGGACCCAATCTATCGGGTTGGATCTTGGACGGGTCAAAGATGGGGCGGTATACCCGAGATGATTCCCAACTACTTCATCTTCAACGTTAGCTTCATTGACAATGCAAGTGAAATTTGCTATACTTTCACCCTCACGGACCCTTCAGCCTTATCAAGATTGGCGCTTGACAGCACTGGTCACTTGAGCCGATCCACGTGGCAGCCTGATGACCGCAGATGGCAAGAAATATTGCACATTCCAAGACAGATTTGTGATCACTATCGACGGTGCGGGTCAAATAGTTACTGTTACGAGGACTATGGTGTTGACAAGTTTCAATGTGTGTGCTTGCCTGGATTCGAAACCAAAAACCCACAAATGAGAAGTGGGTCGGGTGGTGGTGGGTGTGTGAGGAAGAAGAATGTGTCCACATGTCAAAGTGGGGAGGGGTTTGTGAAAGTGGAACGTATGAAGCTACCAGATACATCAGAGGTACACTTGGATCAGAGCATGAGCATGAACTTGAAAGAGTGTAAAGAGAAATGTCTGAAGGATTGTTCATGTGAAGCATATGCGAGTGCAAATGAGGTCACCCTGAGAGGCTGCTTGACCTGGCATACTGATATGGAAGACATAAGAATATTCAATAGTACGGGTCAAGATTTATATGTTCGTGTGGATGCAATTGAATTAGCTAAATATGAAATCAAGCATTATGGTTCTCTTGGAAAGAAGGGGATGGTCACACTCTTAGTCATTTTTATTTGCCTCTTAATGTTGTTGATCACTTTCGTGTATTGGTTTGCAAAGAAAAAGAAACAAGTGAGAAGAAGAAGGCATGATGAATATTTAGTCGACAGAACAAAAGGCTCAGATTTATCATTATTCAATCTAAGTGACATAATTGCAGCAACAAATAATTTATCTGATGCTAACAAGCTTGGACAAGGTGGTTTTGGTTCAGTTTATAAGGACCAGATCGAAGCAAGCACAATTAATGTTGTAGGAACCTATGGTTACATGTCACCTGAATATGCAATGGAAGGATTGTTCTCAACAAAATCAGATGTCTATAGCTTCGGAGTCTTACTTCTTGAGATTGTTACCGGCAGAAAGTGTAGCAATCGTTATGATGACATTGCCTACACTTTTGTTGGACATATTTGGGAATTATGGAGAGAAGGCAGAGCTACAGACATTGTTGATCCATCATTAAGAGGTGAGACATGTATTGAACAAGTTATAAAATGCATAAATATTGGGCTTCTATGTGTACAAGACTATGCAACAGACAGACCAACTATGTTAGAAGTAATTTCCATGTTAGATAATGACATAGTTCTTCCATCTCCAAAACAACCAGGATTTTTGTTCAAGAAGACTACATGTGATCAATCAAATCCAGGTGCTAGTGGTACTGAGGAATTTTATTCGTTGAATAGAATGAGTACTACAGAGATTGAAGCTCGGTAA 1509 0.4056 MRYKIEPRGYPQFFVYRNEDPIYRVGSWTGQRWGGIPEMIPNYFIFNVSFIDNASEICYTFTLTDPSALSRLALDSTGHLSRSTWQPDDRRWQEILHIPRQICDHYRRCGSNSYCYEDYGVDKFQCVCLPGFETKNPQMRSGSGGGGCVRKKNVSTCQSGEGFVKVERMKLPDTSEVHLDQSMSMNLKECKEKCLKDCSCEAYASANEVTLRGCLTWHTDMEDIRIFNSTGQDLYVRVDAIELAKYEIKHYGSLGKKGMVTLLVIFICLLMLLITFVYWFAKKKKQVRRRRHDEYLVDRTKGSDLSLFNLSDIIAATNNLSDANKLGQGGFGSVYKDQIEASTINVVGTYGYMSPEYAMEGLFSTKSDVYSFGVLLLEIVTGRKCSNRYDDIAYTFVGHIWELWREGRATDIVDPSLRGETCIEQVIKCINIGLLCVQDYATDRPTMLEVISMLDNDIVLPSPKQPGFLFKKTTCDQSNPGASGTEEFYSLNRMSTTEIEAR 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g1579 502 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 347 445 - -
Alju04g1579 502 ProSiteProfiles PAN/Apple domain profile. 157 239 IPR003609 -
Alju04g1579 502 Gene3D Transferase(Phosphotransferase) domain 1 296 460 - -
Alju04g1579 502 Pfam Protein tyrosine and serine/threonine kinase 351 452 IPR001245 GO:0004672|GO:0006468
Alju04g1579 502 CDD PAN_AP_plant 155 238 - -
Alju04g1579 502 ProSiteProfiles EGF-like domain profile. 99 138 IPR000742 -
Alju04g1579 502 Pfam S-locus glycoprotein domain 23 135 IPR000858 GO:0048544
Alju04g1579 502 Pfam PAN-like domain 157 224 IPR003609 -
Alju04g1579 502 SMART ntp_6 158 238 IPR003609 -
Alju04g1579 502 SUPERFAMILY Protein kinase-like (PK-like) 342 463 IPR011009 -
Alju04g1579 502 ProSiteProfiles Protein kinase domain profile. 135 460 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g1579 Alju-ChrAlju04 37978090 37987413 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g1579 212 502 Receptor kinase-like Gene Family AT4G11480 35.514 9.59e-41 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Alju04g1579 S_locus_glycop 5.4e-27 No_clan