Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g1577 ATGAGGATAGACCCAACTGGATATCCTCAGGCTTTCATGTATAAGGACGGAGATTCATTTTGGCGGGTCGGGTCATGGACGGGTCAAGGATGGAGTGGTATTGCCGCGATGAGACCCGACCCGGTGCAGTATGTTGTTTTTACTAACAATGCTGATGAAGTTACTGTAATGAATGTCGTCAAGATCTTAAAGGATCCTGCAACCTTTCAAAGACTTGTGCTTGATGAAACCGGTCGAATATCACGAAATGCTTGGCGAGCTCAAGAAAATAGATGGGTCGTAGCCTGGTATGGTCCCACAGATGAGTGTGACAGATATAGAAGGTGTGGATCAAATAGCATTTGTGATCCTTATAAAAAAGAAAAGCTTGAATGTGTGTGTCTACCTGGATTCGAACCCAAGAACCTGAGAGACGGATCGAATGGGTGTATGAGGAAGAAGAATGTGTCCACGTGTCAAAGTGGGGAAGGTTTTGTCAAGGTGGCGTATGTGAAGGTGCCAGAGACGTCAAAGGCACACGTGGATAACAATACAAGCATGAGCTTGGATGATTGCAAAGAGAAATGTTTGAAGGATTGTTCGTGTACAGCATACACAAGTGTCAATAAAATTACACACATAGGCTGTTTGACATGGTACAGTGATGACATGGAAGATATTAGGGCATTCAATGGTATTGGACAAGACTTTTACGTGCGTGTGCATGCAGTTGAATTAGCCAAATATGACAGGAAGCCCTACGGTTCTCTTGGCAAGAAGGGGTTCGTGACAGTCATAGTTGTTTCTGTTTTCCTGTTTATACTTGTGCCAACCTCTCTTCTTGTACTGGGAAGCACAGAACATGTTGTGGGAACTTATGGCTATATATCTCCTGAATATGCAATGGAAGGATTATTTTCAATAAAATCTGATGTATACAGCTTTGGAGTTTTACTTCTTGAAATTGTTACAGGGAGAAAGAATAGTGGTTATTATGATGGCATTAATTCTACTTTGGTTAAACATATTTGGGACTTATGGAGAGATGGCAGAGCCTTGGAGATCGTAGATCCATCATTAAAATGTGAGATATGCGTTGAACATGAAGTTCTAAAGTGCATCCAAATTGGGTTGTTATGTGTAAAAGAGTATGCATCAGATAGGCCAACTATGCTAGAAGTTGTTTCCATGTTGGAGAATGGCTCAACTCTTCATCCTCCCAAACCACCAGCATTTGTTTTCAAGAAAACTACTGCTGATCATTCAAATCAATCTACTGTGATTGAAGAATTTACTTGTTCAAATGGAATGAGTACTACTGTGATTGAAGCTCGCTAA 1317 0.4115 MRIDPTGYPQAFMYKDGDSFWRVGSWTGQGWSGIAAMRPDPVQYVVFTNNADEVTVMNVVKILKDPATFQRLVLDETGRISRNAWRAQENRWVVAWYGPTDECDRYRRCGSNSICDPYKKEKLECVCLPGFEPKNLRDGSNGCMRKKNVSTCQSGEGFVKVAYVKVPETSKAHVDNNTSMSLDDCKEKCLKDCSCTAYTSVNKITHIGCLTWYSDDMEDIRAFNGIGQDFYVRVHAVELAKYDRKPYGSLGKKGFVTVIVVSVFLFILVPTSLLVLGSTEHVVGTYGYISPEYAMEGLFSIKSDVYSFGVLLLEIVTGRKNSGYYDGINSTLVKHIWDLWRDGRALEIVDPSLKCEICVEHEVLKCIQIGLLCVKEYASDRPTMLEVVSMLENGSTLHPPKPPAFVFKKTTADHSNQSTVIEEFTCSNGMSTTVIEAR 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g1577 438 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 280 382 - -
Alju04g1577 438 Pfam PAN-like domain 152 215 IPR003609 -
Alju04g1577 438 CDD PAN_AP_plant 150 234 - -
Alju04g1577 438 SUPERFAMILY Protein kinase-like (PK-like) 278 391 IPR011009 -
Alju04g1577 438 ProSiteProfiles PAN/Apple domain profile. 152 235 IPR003609 -
Alju04g1577 438 Gene3D Transferase(Phosphotransferase) domain 1 269 398 - -
Alju04g1577 438 SMART ntp_6 153 234 IPR003609 -
Alju04g1577 438 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 275 396 - -
Alju04g1577 438 Pfam S-locus glycoprotein domain 21 135 IPR000858 GO:0048544
Alju04g1577 438 Pfam Protein tyrosine and serine/threonine kinase 286 390 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g1577 Alju-ChrAlju04 37938353 37942088 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g1577 277 414 Receptor kinase-like Gene Family AT3G45860 51.408 2.36e-37 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Alju04g1577 PK_Tyr_Ser-Thr 4.2e-08 CL0016