Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g1576 ATGAACTATAAGATCGACTCGAGAGGCTATCCTCAGTTCTTTGTCTACAGAAACGAGGACCCAATCTATCGGGTTGGATCTTGGACGGGTCAAAGATGGGGCGGTATACCCGAGATGGTCCCCAACTACTTCATCTTCAACGTTAGCTTTATTGACGATGCAAATGAAATGAGCCTAATGTACAGCCTTAAGGACCCTTCGGCCTTATCAAGAATGGTGCTTGACAACACTGGACACTTGAGCCGATATACGTGGCAACCTGATGGCCGTATATGGCAAGAAATCTTGCACATTCCAAGAGAGAATTGTGACCACTTTCGACGGTGCGGGTCAAATAGTTACTGCGACTCGTACTATGTTGCGGACGAGTTTCAATGCGAATGCTTGCCTGGATTCAAACCTAGAAACCCACATATGAGAAATGGGTTGGGTGGAGGGTGTGTGAGGAAGAAGAATGCGTCCACGTGTCAAAGTGGGGAGGGGTTTGTGAAAGTGGCACGCATGAAGCTACCAGAAACTTCCAAGGCACACTTGGATAAGAGCGTGAGCATGAGCTTGGAAAAGTGTGAAGAGAAGTGTCAGAAGGATTGTTCATGTGAAGCATATGCGAGTGCAAATGAGGTCACACTAAGAGGCTGCTTGACGTGGCATGCTGATATGGAAGACATGAGGATATTCAACAGTGTGGGTCAAGATCTGTATGTTCGTGTGGATGCAGTTGAATTAGCTAAATACGAAAACAAGCACCATGGTTCTCTTGGAAAGAAGAGGATGGTAACACTCCTGGTCGTTTTTGTTTGCCTCTTAATGCTGGTGATCACTTTCATGTACTGGTTTGCAAAGAACAAGAAACAAGCGAGAAGAAGGAGGCTTGAAGAATACTTAGTTGATAGAGGAAAAGATTCAGATTTATCATTATTCAATCTAAGTGACATAATTGCAGCAACAGAGAATTTCTCTGATGCTAACAAGCTTGGACAAGGTGGTTTTGGTTTAGTTTATAAGATTGAAGCAAGAACAAATAATGTTGTTGGAACCTATGGTTACATGTCACCCGAATACGCAATGGAAGGGTTGTTCTCAATAAAATCTGATGTCTATAGCTTTGGTGTTTTACTTATTGAGATTGTTACCGGTAGAAAATGTCACGGTCGCTATGATGACATCACCTACACCTTAGTTGGACATATTTGGGAAATGTGGAGAGAAGGTAGAACCATGGACGTTGTTGATCCATCATTAAGGGGTGAGACATGTCTTGATGAACAAGTTATAAAATGCATAAATATTGGGCTTTTATGTGTACAAGATTGTGCAACAGACAGGCCAACTATGTTAGAAGTGATTTCCATGTTGGATAATGACATAGTTCTTCCTCCTCCCAAACAACCAGGATTTATGTTCAAGAAAACTACACGTAATCAATCAAATCCATGTGCAGGTGGTACTGAGGAATTTATTAGTTCGGTAAATGGAATGAGTACTACAGAGATTGAAGCCCGCTAA 1506 0.423 MNYKIDSRGYPQFFVYRNEDPIYRVGSWTGQRWGGIPEMVPNYFIFNVSFIDDANEMSLMYSLKDPSALSRMVLDNTGHLSRYTWQPDGRIWQEILHIPRENCDHFRRCGSNSYCDSYYVADEFQCECLPGFKPRNPHMRNGLGGGCVRKKNASTCQSGEGFVKVARMKLPETSKAHLDKSVSMSLEKCEEKCQKDCSCEAYASANEVTLRGCLTWHADMEDMRIFNSVGQDLYVRVDAVELAKYENKHHGSLGKKRMVTLLVVFVCLLMLVITFMYWFAKNKKQARRRRLEEYLVDRGKDSDLSLFNLSDIIAATENFSDANKLGQGGFGLVYKIEARTNNVVGTYGYMSPEYAMEGLFSIKSDVYSFGVLLIEIVTGRKCHGRYDDITYTLVGHIWEMWREGRTMDVVDPSLRGETCLDEQVIKCINIGLLCVQDCATDRPTMLEVISMLDNDIVLPPPKQPGFMFKKTTRNQSNPCAGGTEEFISSVNGMSTTEIEAR 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g1576 501 SMART ntp_6 157 237 IPR003609 -
Alju04g1576 501 Pfam PAN-like domain 156 223 IPR003609 -
Alju04g1576 501 Pfam Protein tyrosine and serine/threonine kinase 330 450 IPR001245 GO:0004672|GO:0006468
Alju04g1576 501 SUPERFAMILY Protein kinase-like (PK-like) 339 452 IPR011009 -
Alju04g1576 501 Gene3D Transferase(Phosphotransferase) domain 1 292 457 - -
Alju04g1576 501 Pfam Variant erythrocyte surface antigen-1 125 287 IPR024751 -
Alju04g1576 501 SUPERFAMILY Protein kinase-like (PK-like) 304 344 IPR011009 -
Alju04g1576 501 ProSiteProfiles PAN/Apple domain profile. 156 238 IPR003609 -
Alju04g1576 501 ProSiteProfiles EGF-like domain profile. 99 138 IPR000742 -
Alju04g1576 501 CDD PAN_AP_plant 154 237 - -
Alju04g1576 501 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 342 443 - -
Alju04g1576 501 ProSiteProfiles Protein kinase domain profile. 149 458 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g1576 501 Pfam S-locus glycoprotein domain 23 135 IPR000858 GO:0048544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g1576 Alju-ChrAlju04 37914362 37918446 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g1576 300 496 Receptor kinase-like Gene Family AT4G11480 42.308 6.74e-38 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Alju04g1576 VESA1_N 1.6e-05 No_clan