Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g1573 ATGACAGTGTCTTCTGGCAAAGAGTTTGCTCTGATCATCACTACTCTCTTATTCCTTCTCTTCCTTCTTCATCAAGCATCTAGTCACTCTCTTGATAGAATAACCCCCACCCAACCCCTCAGAGACGGCGACGTTTTGCTCTCCGACAAAGCCGCGTTCGCCCTCGGTTTCTTCACTCCCTCGAATAGTTCCAGAAACCGATACGTCGGAATCTGGTACAACAAAGTTTCAATACAAACCGTGGTTTGGGTTGCTAATAGAGACAATCCTCTCAATGATGCTTCTGGTGTTCTCTCCATCAACACCCATGGAAACGTCTTTGTTTCTCTCAACAACACAAGGACCGGCCTCAACCCTGTTTGGTCTTCCAATGGATCTTTGTCATCATCACCTTCCATCAATAATACCTTCGCTAAGCTTCTAGATACAGGAAACTTGGTTTTGATAGAAGATGGAGGAAGACAGAGAATTCTATGGCAGAGTTTTGATTATCCTTGTGACACCATGATGCCGTTTATGAAACTCGGGTTAGACCGGAACACCGGTTTGAACCGCTTCCTGACGTCATGGAAATCCGCCGACGACCCAGGATTCGGGAACGTGAGTTATAGGATCGACCCAACAGGGTTTCCTCAGTTATACATGAACAGAAACGGGAATCCGATCTGGAGGGTCGGATCTTGGACGGGTGAAAGATGGAGCGGTGTACCCGAGATGACACCCAACTTCATCTTCAGCGTAGTTTTTGTCAACAACGATACTGAAGTTACCGTACTGTATGGTGTGAAGGACCCTTCCGTTTTCACCAGAATGGTTCTTGAAAACTCCGGTCACGTGAGACGGACGACATGGCAACCTCAAGAACATCGATGGTTTGAGATCTGGAATGGTCCGAAAGAGGACTGTGACAACTTCCGGCGGTGCGGGTCAAATAGTAACTGTGACCCGTATAATACGGAGAAGTTTGAGTGTGTGTGTCTGCCCGGATTTGAGCCCAAGAACCCGAGAGAATGGTACCTTAGAGACGGGTCGGATGGGTGCGTAAGGAAGAAGAACGTGTCCACGTGTCGAAGCGGTGAGGGGTTCGTGAAGGTGGCGCGTGTGAAGGTGCCGGATACGTCCAAAGCGCGTGTGGATTTGAGCATTAGCATGAAACAATGCAAGGAGAAGTGCTTGGGGGATTGCTCCTGTGTGGCGTACACGACTGCGAATGAGAGCTCATTAAATGGTTGTCTGACGTGGCATACTGACATGGAAGATATTAGGACGTACAGTAGTGTGGGACAGGATCTCTATGTACGTGTGGATGCCCTTGAATTAGCTAAGTACAGAAAAAAGCCCTTTGGTTCGCTTGGCATGAAAGGGATGATTTCACTGTTAGTTGTTTCGATATTACTAGTAATGTTTCTGGTGATATCTTTCATATATTGTCTTATAAAGAACAAGAAACAAGCAAGAAGGCATAGCAAAAATTTGTTTAACTACAACTTTGAGAACTCTGGGAGTATGGATGACTTTAGCGGTGGGAAAAATTCAGATTTACCATTATTTGATCTTATTGACATAGCTGCAGCAACTGAAAACTTCTCTGATACTAACAAGCTTGGACAAGGTGGTTTTGGTTCGGTTTATAAGGGTTCGCTGAGTAATGGAATGGCAATAGCAGTGAAGAGGCTATCAAAGTACTCTGGGCAAGGCATTGAAGAGTTCAAAAATGAGGTTGTTTTAATTGCGAAGCTGCAACATAGAAATCTCGTGAGAATCTTGGGTTGTTGCATACAAGGAGAAGAGAAGATGTTGATCTATGAGTATTTACCAAATAAAAGTTTGGACTTTTTCATATTTGATCAAGAAAGGAAGTTACAACTGAACTGGAGCAAACGGTCTGATATCATATGTGGGGTTGCAAGAGGAATCTTATATCTTCATCAAGATTCAAGATTGAGAATAATTCATAGAGACTTGAAGGCTAGTAATGTCTTGTTGGACTCCGAATTAAATCCTAAAATCGCAGATTTTGGTATGGCTAAAATATTTGGTGGAGATCAAATTGAAGCAAACACAAAACGTGTTGTTGGAACCTATGGTTACATGTCACCTGAATATGCAATGGAAGGGTTATTCTCGGTAAAGTCTGATGTGTATAGCTTTGGAGTGTTGCTTCTAGAAATTGTTACTGGTAAAAAGAATAGCGGTCATTATGAAGAAATTACCTCAACTTTGGTTGGACATATTTGGGAACGATGGAGAGAAGGTAGAGCTATGGAGACTGTTGATCCATCATTATCAGTAGAAGACGATGCTTGCCGTAATGATCTTCTAAAATGCATCCAAATTGGTCTTTTATGTGTACAAGACTATGCAGCCGACAGACCAACTATGTCAACAGTTGTTTCCATGTTGGGAAATGACTCAACTCTTCCTTCTCCAAAACAACCAGCTTTTATTTTCGAAAGAAATAAACCTGGTGACAGTTCAAATCCATTAACCAGTGAAGGAGTTAATTCAGTAAATGAGATGAGTACTACTGTTGTTGAAGCTCGCTAA 2547 0.4299 MTVSSGKEFALIITTLLFLLFLLHQASSHSLDRITPTQPLRDGDVLLSDKAAFALGFFTPSNSSRNRYVGIWYNKVSIQTVVWVANRDNPLNDASGVLSINTHGNVFVSLNNTRTGLNPVWSSNGSLSSSPSINNTFAKLLDTGNLVLIEDGGRQRILWQSFDYPCDTMMPFMKLGLDRNTGLNRFLTSWKSADDPGFGNVSYRIDPTGFPQLYMNRNGNPIWRVGSWTGERWSGVPEMTPNFIFSVVFVNNDTEVTVLYGVKDPSVFTRMVLENSGHVRRTTWQPQEHRWFEIWNGPKEDCDNFRRCGSNSNCDPYNTEKFECVCLPGFEPKNPREWYLRDGSDGCVRKKNVSTCRSGEGFVKVARVKVPDTSKARVDLSISMKQCKEKCLGDCSCVAYTTANESSLNGCLTWHTDMEDIRTYSSVGQDLYVRVDALELAKYRKKPFGSLGMKGMISLLVVSILLVMFLVISFIYCLIKNKKQARRHSKNLFNYNFENSGSMDDFSGGKNSDLPLFDLIDIAAATENFSDTNKLGQGGFGSVYKGSLSNGMAIAVKRLSKYSGQGIEEFKNEVVLIAKLQHRNLVRILGCCIQGEEKMLIYEYLPNKSLDFFIFDQERKLQLNWSKRSDIICGVARGILYLHQDSRLRIIHRDLKASNVLLDSELNPKIADFGMAKIFGGDQIEANTKRVVGTYGYMSPEYAMEGLFSVKSDVYSFGVLLLEIVTGKKNSGHYEEITSTLVGHIWERWREGRAMETVDPSLSVEDDACRNDLLKCIQIGLLCVQDYAADRPTMSTVVSMLGNDSTLPSPKQPAFIFERNKPGDSSNPLTSEGVNSVNEMSTTVVEAR 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g1573 848 Pfam D-mannose binding lectin 80 191 IPR001480 -
Alju04g1573 848 Pfam Domain of unknown function (DUF3403) 803 848 IPR021820 GO:0004674
Alju04g1573 848 Gene3D Transferase(Phosphotransferase) domain 1 605 809 - -
Alju04g1573 848 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 495 604 - -
Alju04g1573 848 SUPERFAMILY alpha-D-mannose-specific plant lectins 81 196 IPR036426 -
Alju04g1573 848 SMART serkin_6 529 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g1573 848 Gene3D - 27 162 IPR036426 -
Alju04g1573 848 ProSiteProfiles EGF-like domain profile. 298 336 IPR000742 -
Alju04g1573 848 SUPERFAMILY Protein kinase-like (PK-like) 514 801 IPR011009 -
Alju04g1573 848 Gene3D Phosphorylase Kinase; domain 1 498 604 - -
Alju04g1573 848 ProSiteProfiles Protein kinase domain profile. 529 807 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g1573 848 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 26 162 - -
Alju04g1573 848 ProSitePatterns Protein kinases ATP-binding region signature. 535 557 IPR017441 GO:0005524
Alju04g1573 848 ProSiteProfiles Bulb-type lectin domain profile. 31 161 IPR001480 -
Alju04g1573 848 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 16 792 - -
Alju04g1573 848 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 605 809 - -
Alju04g1573 848 ProSitePatterns Serine/Threonine protein kinases active-site signature. 650 662 IPR008271 GO:0004672|GO:0006468
Alju04g1573 848 PIRSF SRK 5 848 IPR024171 GO:0004674
Alju04g1573 848 CDD B_lectin 37 165 IPR001480 -
Alju04g1573 848 SMART ntp_6 357 435 IPR003609 -
Alju04g1573 848 ProSiteProfiles PAN/Apple domain profile. 356 436 IPR003609 -
Alju04g1573 848 CDD STKc_IRAK 535 801 - -
Alju04g1573 848 Pfam PAN-like domain 356 421 IPR003609 -
Alju04g1573 848 SMART blect_4 37 165 IPR001480 -
Alju04g1573 848 CDD PAN_AP_plant 354 435 - -
Alju04g1573 848 Pfam Protein tyrosine and serine/threonine kinase 532 801 IPR001245 GO:0004672|GO:0006468
Alju04g1573 848 Pfam S-locus glycoprotein domain 223 334 IPR000858 GO:0048544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g1573 Alju-ChrAlju04 37694823 37701146 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g1573 517 834 Receptor kinase-like Gene Family AT4G23250 61.371 4.22e-125 391
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Alju04g1573 PK_Tyr_Ser-Thr 2.1e-47 CL0016