Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g1572 ATGGAAGAAACAAAGTTCTCCTTCACTCTCTTCTTACTTGCTACTTGTTTCTCTCTGATATCCTTGTTCCCAACAGTTTTGAAAGCAAGGGATTCAATAACTTCAACACAATCCATCACTGATAACCAGACATTAGTTTCCTCTGGTGAAAAATTTGAGCTTGGTTTCTTCAGTCCTGGAAATTCCAGCTTAAAATATCTGGGAATATGGTACAAGTATATCCCAAAGCTTACTGTTATTTGGGTAGCAAACAGGGACAATCCACTAGTGAATTCTACAGGCATTTTAAAATTCAGCAAAGATGGTAAGCTTCTCATTCTCAGTCATACAGGAAGTATTATATGGTCTGCAAACTCATCCAGATCAGCAAGGAAACCGGTAGCTCGGCTTCTAGACACGGGAAATTTCGTCTTGAGAGACCTTGAGGATGCAAGCTCGGAGAGTTACAGATGGCAGAGTTTTGATTATCCATCTGATACATTTATTCAAGGAATGAGACTTGGTTGGAACTTTAAAACTGGCTTGAACAGACACTTAACCTCTTGGAAAAGCCAAGATGATCCTGCTTCTGGCGAATATACTTATAGTGTGGACCCACGTGGCCTTCCTCAGCTTCTTCTTCTTAAAGGGAAGAAGAAGGTTTTTAGAAGTGGACCATGGTTTGCACAACAACTCAAAGGTGTCACAGCTCTTATGCAAAACCCAGTTTTCAAACCTGTTTTTGTTTTCAATTCTGATGAAGTGATTTTCACGTATGAAACTAAGGACAGTGTCACTTCAAGATTTGTACTTACCCAATCTGGTTTGATTCAGCACTTCTCATGGAGTGATCCTCATTCCAGTTGGATCCCAGAATTTACAGTTCAAGGAGATCGTTGCGACAACTATGCCATTTGCGGTGCCAACAGTAGTTGCAACATAAAAGAATCCCCAATTTGCAAGTGTCTGGATGGATTTGAGCCTAGGTTATGTCAAGAATGGAGGAAAAACAAATGGTCAGGGGGATGTGTTATGAAGGATTCTCATACTTGCAGAAATGGAGAGGGATTTAAGAAACTTACAGGAATGAAACTACCAGATTCTGCTGTGTTTCACACAAACTCAACCATGAGTTTTGAGGAGTGTGAGGCGGAGTGCTTGAAGAATTGTTCATGTGTAGCTTATGCTAAACTGGATATCAATACAACCGGTAAAGGATGTGTTGCTTGGTTTGGAGGTTTATTCGATATCAGAAAGTTTGCAGATTTCGGACAAGATCTCTACATCAGAGTTCCAGCTTCAGAACTAGGTTCAAATGCTGATGTCCCAAAAAGAAAGAAACACATAATAATTATTGTGGCTGTATCAGTAAGTTCAGCAATTGTTGTCTTGGCATCATGGCTGATAATTAAGAGACGTAGAAGAGGAGCTACAGAAAGAGATATTCAACTGATACTTAACAGATCAAGAAGTGAACTTCCATCATTCAAGATTGACATTATTGAAGCTGCAACAAAGAACTTCTCTGCCTGCAATAAGATTGGAGAAGGTGGATTTGGTCCTGTGTACAAAGGTAAACTTGCATCAGGACAAGAAATAGCTGTGAAAAGACTCTCTGAAAGTTCAGGACAAGGCTTGCAAGAGTTCAAGAATGAGGTTATTATGATATCCCTACTTCAGCATCGAAATCTTGTCAAACTTCTAGGTTGCTGCATTCATAAAGATGAAAGAATGTTGATCTATGAGTACATGCCGAATCGGTGCTTAGACTCTATACTATTTGATGAAACAAAGCGTTTGACACTCACTTGGCAAAAGAGAATGGATATTATTGTTGGAGTTGCAAGAGGAATCCTTTATCTTCACAGAGACTCAAGACTGAGAATAATTCATAGAGATTTGAAAGCCAGCAATGTTCTTTTAGATAGTGAAATGAATCCCAAAATATCTGACTTCGGAATGGCGAGAATGTTTGGTGGAGATCAAACTGAAGCAAAGACCAATAGAGTAGTTGGAACCTATGGATATATGCCACCTGAGTATGCGATAGATGGACACTTCTCATTCAAATCCGATGTCTTCAGCTTCGGTGTTTTACTATTAGAGCTGTTGAGTGGCAAGAAAAACAAAGGGTTTTTCCATCCAGATCACAAGCTGAATCTCTTAGGCCATGCATGGAAGCTTTGGACGGAAGAGAAGGCAATGGAGCTGATGGATCCATTACTTGAGAATCAGTTTCCTGCATCAGAAGCTCTAAGGTGTATCCAAGTAGGACTTTCTTGCGTTCAACAGAACCCGGAGGACCGACCAACAATGTCACAAGTGATTTTGATGTTAGACAGTGACAGTGTCTCTCTGCCACAACCTGGACGACCAGGAATGTATTCAGAGAGATGTTTCTCTGAGACAGATTCATCATCTCTTGCAGGAATCAATTCTTGTTCCAATAACACAAGCATCACCATACTGGAGGGTCGTTAG 2460 0.4028 MEETKFSFTLFLLATCFSLISLFPTVLKARDSITSTQSITDNQTLVSSGEKFELGFFSPGNSSLKYLGIWYKYIPKLTVIWVANRDNPLVNSTGILKFSKDGKLLILSHTGSIIWSANSSRSARKPVARLLDTGNFVLRDLEDASSESYRWQSFDYPSDTFIQGMRLGWNFKTGLNRHLTSWKSQDDPASGEYTYSVDPRGLPQLLLLKGKKKVFRSGPWFAQQLKGVTALMQNPVFKPVFVFNSDEVIFTYETKDSVTSRFVLTQSGLIQHFSWSDPHSSWIPEFTVQGDRCDNYAICGANSSCNIKESPICKCLDGFEPRLCQEWRKNKWSGGCVMKDSHTCRNGEGFKKLTGMKLPDSAVFHTNSTMSFEECEAECLKNCSCVAYAKLDINTTGKGCVAWFGGLFDIRKFADFGQDLYIRVPASELGSNADVPKRKKHIIIIVAVSVSSAIVVLASWLIIKRRRRGATERDIQLILNRSRSELPSFKIDIIEAATKNFSACNKIGEGGFGPVYKGKLASGQEIAVKRLSESSGQGLQEFKNEVIMISLLQHRNLVKLLGCCIHKDERMLIYEYMPNRCLDSILFDETKRLTLTWQKRMDIIVGVARGILYLHRDSRLRIIHRDLKASNVLLDSEMNPKISDFGMARMFGGDQTEAKTNRVVGTYGYMPPEYAIDGHFSFKSDVFSFGVLLLELLSGKKNKGFFHPDHKLNLLGHAWKLWTEEKAMELMDPLLENQFPASEALRCIQVGLSCVQQNPEDRPTMSQVILMLDSDSVSLPQPGRPGMYSERCFSETDSSSLAGINSCSNNTSITILEGR 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g1572 819 CDD B_lectin 36 157 IPR001480 -
Alju04g1572 819 SMART serkin_6 501 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g1572 819 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 25 154 - -
Alju04g1572 819 ProSitePatterns Serine/Threonine protein kinases active-site signature. 622 634 IPR008271 GO:0004672|GO:0006468
Alju04g1572 819 Gene3D Hepatocyte Growth Factor 340 419 - -
Alju04g1572 819 ProSiteProfiles Bulb-type lectin domain profile. 30 151 IPR001480 -
Alju04g1572 819 ProSitePatterns EGF-like domain signature 2. 313 324 IPR000742 -
Alju04g1572 819 CDD STKc_IRAK 507 773 - -
Alju04g1572 819 PIRSF SRK 2 819 IPR024171 GO:0004674
Alju04g1572 819 SMART blect_4 36 157 IPR001480 -
Alju04g1572 819 SUPERFAMILY alpha-D-mannose-specific plant lectins 79 188 IPR036426 -
Alju04g1572 819 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 16 763 - -
Alju04g1572 819 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 463 576 - -
Alju04g1572 819 Gene3D Phosphorylase Kinase; domain 1 463 576 - -
Alju04g1572 819 ProSiteProfiles PAN/Apple domain profile. 344 425 IPR003609 -
Alju04g1572 819 ProSiteProfiles EGF-like domain profile. 289 325 IPR000742 -
Alju04g1572 819 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 577 780 - -
Alju04g1572 819 Gene3D Transferase(Phosphotransferase) domain 1 577 779 - -
Alju04g1572 819 CDD PAN_AP_plant 345 425 - -
Alju04g1572 819 Pfam S-locus glycoprotein domain 215 322 IPR000858 GO:0048544
Alju04g1572 819 Pfam Protein tyrosine and serine/threonine kinase 504 770 IPR001245 GO:0004672|GO:0006468
Alju04g1572 819 SUPERFAMILY Protein kinase-like (PK-like) 484 783 IPR011009 -
Alju04g1572 819 Gene3D - 25 154 IPR036426 -
Alju04g1572 819 SMART ntp_6 345 424 IPR003609 -
Alju04g1572 819 Pfam PAN-like domain 344 410 IPR003609 -
Alju04g1572 819 ProSiteProfiles Protein kinase domain profile. 501 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g1572 819 Pfam D-mannose binding lectin 78 183 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g1572 Alju-ChrAlju04 37622312 37625761 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g1572 424 786 Receptor kinase-like Gene Family AT4G05200 51.087 2.27e-126 393
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Alju04g1572 PK_Tyr_Ser-Thr 1.2e-50 CL0016