Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g1571 ATGATGAAGATAGCAAATCGGGTGGTTATTGTTTCGGTTATAATCCATCACTGCTTCTTGTTTTGTGCAGCCTCTGACACCATAACCTTAGACAGTCCCATAAGCGATGGCGAGCTTCTGATTTCTAAAGAAAACATGTTTGCTCTTGGGTTCTTCACTCCCAGTAAATCAAACTATCGCTATGTCGGAATTTGGTATTACAATTTGGAAGAACATACTGTTGTTTGGGTGGCTAACAGAGATGTTCCCATGAATGACACCTCTGGTGTTCTCTCCATCAGCTCTGAAGGAAACTTAGTTCTTCATGGAAACCACTCTGAGATTCCAATCTGGTCCACAAATGTTTCTGTCACTGCTCCAAATACAACAGTAATGGCGCAACTCACATATTTGGGTAACCTTGTTTTGTCTCAAAATGTCTCTGAAACTCTTATATGGCAAAGTTTTGATCATCCCACCAATACCTTGCTTCCGTATGCAAAATTGGGAGTCAACAAAAGAACTGGTCAGAGCTGGTTCTTGCAAGCATGGAAGACAGATGATGATCCTGGAACCGGAAGCTTCTCAGTGAGGTTCAATACTACTGGGAAATCTCAGATGTTTGCGTACTACATGAACACTCCAGTGTGGCGAGCAGGATCTTACAATGGCGAAATATTTGTTGGCATCCCATTTATGAAACGAGCAACAGCCACTGATTACAGCATTAATGTCACAGACAATGATAATGAGGTTGGATTTATATTTTATGCTTTCGACAAGAAAACTATCATGCGGGTGGTGGCTCTTCAGTCTGGTTTCTTTCAAACATTGCTTTGGGATTATGGTAAGAAGCAATGGAATCGGTTTTGGTCTGCCCCAGAAGTAGATTGTGACAACTATGGATCATGTGGTTCCAATGGTAATTGTGACCCTCTTAACTATGAAAATTTCAAGTGTTCATGCCTACCTGGATTTGAACCAGGAAACCCAACAAATTGGTATCAACATGGTGATGCAACAGAGGGTTGTGTGAGGAAGAAAGGGCCATCCTTGTGTGGGAATGGAGAGGGATTTGTTAGAGTAGAGCGCGTCAAGATTCCGGATACTTCTGTGGCGAATGCTAATTTGGAGATGAGTTTGGAAGAATGTGAACAAGAGTGCTTGAGAAATTGTTCTTGTAGTGCCTATGCAGCTGCAGATGTGAGAAATGGTGGAAGTGGATGCTTGACATGGTTTGGTACTTTGATGGACACACAGATATTAAGTCAAGAAGGCCATGATCTATTTGTTCGTGTTGATGCTGTTGAACTTGCAAAATATGCTAGGAAGTCAAAAGGAGCACTTGCCAAGTCTGGGAAAGTGGGAATTGTAATGGCCTGTGTCACTTTGATTACTCTTCTTATTGCCTTATTTGTGTACTGCTTTTGGAGAAGAAAAAGAAGAGATGAAATAGCCGAACAAGAATTAAAATTAAATTCCCCAACAGAGGAGGAGGATGGAGAAAATAGAGCACAACCCAACTTACCATTTTTCAGCATCAAGACCATAATGACTGCAACAAACAATTTTTCAAATGAGAATCAATTAGGGCAAGGTGGATTTGGCTCTGTGTACAAAGGCATATTAGTAAATGGACAAGAGATAGCGGTGAAAAGATTATCCCAAGGTTCTGGACAAGGGACCCAAGAGTTCAAGAACGAAATTAAACTAATTGCAAAGCTACAACATAGGAATCTTGTGAAATTGCTTGGATATTGCATTCATAAAGAAGAAAGGATGTTGATCTATGAGTACCTTCCCAACAAAAACTTGAACTTCTTTCTCTTTGATAGGGAACAAAGAATGTCATTAAATTGGGACACACGTTTTCATATTATATTTGGAATTGCTCGAGGTCTTCTTTATCTTCATCAAGACTCAAGGCTGAAAATAATCCATAGGGATCTTAAAGCTAGCAATATCCTCCTAGATGCTACAATGAATCCAAGAATTTCTGATTTTGGTATGGCTAGAATATTTGGAGAAGATCAAGTCCAAGCAAGAACAAGACGAATCGTTGGAACATATGGTTATATGTCTCCAGAATATGCAATGACAGGGAATTATTCGACAAAGTCCGATGTTTTTAGCTTTGGTATTCTATTGTTAGAGATTACCAGCGGAAAGAGAAATACAGATAGTCTTAAAGAAAGAGCATCTGTAAATTTGATTGGACAGGTATGGGACTTATGGAGAGAAGGAAAAGCCTTGGAAATAGTAGATTCAACACTTGGTGAATCATATCCTCCTGACATAGCCTTAAGGTGCATACAAATTGGACTCTTGTGTGTGCAAGAAAGTGCCTTATATAGGCCATCCATATTGGAAGTCATTTTCATGCTTGGCAATGAAGTAACCCTTCCCTCACCTCGTAAACCTGCTTTCCTATTCGCTTCTAATATAGAACATCCGGAGTCTTCAACATCTGGAGATCTTTCAGTGAACAGTCTTTCAAATACCACAATTAGTGCTCGATGA 2499 0.399 MMKIANRVVIVSVIIHHCFLFCAASDTITLDSPISDGELLISKENMFALGFFTPSKSNYRYVGIWYYNLEEHTVVWVANRDVPMNDTSGVLSISSEGNLVLHGNHSEIPIWSTNVSVTAPNTTVMAQLTYLGNLVLSQNVSETLIWQSFDHPTNTLLPYAKLGVNKRTGQSWFLQAWKTDDDPGTGSFSVRFNTTGKSQMFAYYMNTPVWRAGSYNGEIFVGIPFMKRATATDYSINVTDNDNEVGFIFYAFDKKTIMRVVALQSGFFQTLLWDYGKKQWNRFWSAPEVDCDNYGSCGSNGNCDPLNYENFKCSCLPGFEPGNPTNWYQHGDATEGCVRKKGPSLCGNGEGFVRVERVKIPDTSVANANLEMSLEECEQECLRNCSCSAYAAADVRNGGSGCLTWFGTLMDTQILSQEGHDLFVRVDAVELAKYARKSKGALAKSGKVGIVMACVTLITLLIALFVYCFWRRKRRDEIAEQELKLNSPTEEEDGENRAQPNLPFFSIKTIMTATNNFSNENQLGQGGFGSVYKGILVNGQEIAVKRLSQGSGQGTQEFKNEIKLIAKLQHRNLVKLLGYCIHKEERMLIYEYLPNKNLNFFLFDREQRMSLNWDTRFHIIFGIARGLLYLHQDSRLKIIHRDLKASNILLDATMNPRISDFGMARIFGEDQVQARTRRIVGTYGYMSPEYAMTGNYSTKSDVFSFGILLLEITSGKRNTDSLKERASVNLIGQVWDLWREGKALEIVDSTLGESYPPDIALRCIQIGLLCVQESALYRPSILEVIFMLGNEVTLPSPRKPAFLFASNIEHPESSTSGDLSVNSLSNTTISAR 832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g1571 832 SMART serkin_6 517 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g1571 832 ProSitePatterns Protein kinases ATP-binding region signature. 523 545 IPR017441 GO:0005524
Alju04g1571 832 CDD PAN_AP_plant 343 426 - -
Alju04g1571 832 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 593 796 - -
Alju04g1571 832 Pfam PAN-like domain 346 412 IPR003609 -
Alju04g1571 832 Pfam Protein tyrosine and serine/threonine kinase 520 731 IPR001245 GO:0004672|GO:0006468
Alju04g1571 832 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 20 149 - -
Alju04g1571 832 ProSiteProfiles EGF-like domain profile. 287 325 IPR000742 -
Alju04g1571 832 CDD EGF_CA 290 323 - -
Alju04g1571 832 PIRSF SRK 1 832 IPR024171 GO:0004674
Alju04g1571 832 SMART ntp_6 347 426 IPR003609 -
Alju04g1571 832 ProSiteProfiles Bulb-type lectin domain profile. 25 149 IPR001480 -
Alju04g1571 832 SUPERFAMILY Protein kinase-like (PK-like) 500 804 IPR011009 -
Alju04g1571 832 SMART blect_4 31 152 IPR001480 -
Alju04g1571 832 Pfam D-mannose binding lectin 73 178 IPR001480 -
Alju04g1571 832 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 482 592 - -
Alju04g1571 832 Gene3D Phosphorylase Kinase; domain 1 479 592 - -
Alju04g1571 832 Gene3D Hepatocyte Growth Factor 345 423 - -
Alju04g1571 832 ProSiteProfiles Protein kinase domain profile. 517 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g1571 832 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 183 IPR036426 -
Alju04g1571 832 CDD B_lectin 31 152 IPR001480 -
Alju04g1571 832 MobiDBLite consensus disorder prediction 811 832 - -
Alju04g1571 832 Pfam S-locus glycoprotein domain 210 321 IPR000858 GO:0048544
Alju04g1571 832 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 13 780 - -
Alju04g1571 832 CDD STKc_IRAK 523 788 - -
Alju04g1571 832 Gene3D - 20 150 IPR036426 -
Alju04g1571 832 Gene3D Transferase(Phosphotransferase) domain 1 593 794 - -
Alju04g1571 832 ProSiteProfiles PAN/Apple domain profile. 346 427 IPR003609 -
Alju04g1571 832 ProSitePatterns Serine/Threonine protein kinases active-site signature. 638 650 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g1571 Alju-ChrAlju04 37612943 37617183 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g1571 426 832 Receptor kinase-like Gene Family AT4G05200 48.810 1.43e-126 394
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Alju04g1571 PK_Tyr_Ser-Thr 1.8e-48 CL0016