Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g1561 ATGGAGCAGAAGCAGGTTTTGCTATCAGCATTAGGTGTTGGGGTTGGTGTAGGAGTTGGGCTTGGATTGAGTTCAAGGCTTGGAGGGAATAATGGCAATTCAAGTGAAGAAGAGCTTTGGAATGAGCAAGTTAAGCAAGAGCTTATGAGGCAGGTGATAGATGGCAAGGAATTCAAGGAAACTTTTCAAAACTTCCCTTATTACTTAAGTGAAAGAACTCGAGAGTTATTGAAGAGTGCGGCATTTGTTCAACTAAAAGAACTTCACTTTTCTAGACACATCCGAAACCTTCCACCAGCTAGCAGGACAATTCTACTTTCTGGACCTGCAGAACTTTACCTGCAAACAATTGCCAAGGCTTTAGCACATCACTTCGAATCAAAATTGCTGTTGCTAGATATTGTTGACTTCTCTTTCAAGTCTTCAAAAAGGTCCTTATCTGAGGTGGCTTCCAAGAGATTGACCGGTTTGTTCGGTTACTTTTCGACTAGCAAAACTGAAGATCCCTTGAAGAACAAGAGCAACATAAGCATCGAGGACCAACTCTTTATGCAGTTGCTTTATAAGGTCTTGATTTCTGTCTCAGAAAAAAGTTCCATCATATTATACATTAGGGATGTTGACAAGATTTTCCTGCAATCAGAACAATTATATAACTTGTTCCAAGAAATTATAGAGAAACTTTCAGGGCCAATTTTGATACTCGGTTCCCAAATAACTGATGTTGAAGTTGAATGTTTAGAAGATGAATTGTTAGGAAATGGGTGGTTTCCATGTTATGCTCCACAACCCGATGCAGAAGTTGATGAAAGGCTCGCCGCAATGTTCCCTTACAATATAAAAATCAATCCTCCAAAAGACGAGAATAATCTTCAAAACTGGAAAACCCAACTGGAGGAGAACAATAAAACAACTCAGTCTCAAGATAACAAAAACCACATTGCTAAAGTACTAGCAGAAATTGATGTTGAATGTAAAGACCTGAATTCAATCAGCCATGAGGACACAGAGATACTAAGCAAAAATATTGAAGAAATTGTGGTATCTGCAGTATCTTACTACTTGATGAATACCAAGGATCCAGAATATCATAATGGAAAGCTTGTAATATCATCTCAAAGTTTGTGCCACGGTTTGGATCTGTTCCGCAAAACCGATAGTGTCAAGGATACTCAGAAGCCAGAGACTGATGAAAAGAAAGAAGTTCCTCCAGACAATAGGTATGAAGAGAACATAAGATCAGAGCTTATCCCTGCAAATGAGATAGGAGTTACATTCTCAGATATTGGTGCACTAGAGGAAGTTAAGGAATCACTCCAAGAGCTAATCATGCTTCCCCTTCGAAGACCAGAACTCTTCAAGAGTGGACTTCTTAAGCCTTGTCGAGGTATATTGCTTTTTGGACCTCCAGGTACTGGAAAAACAATGCTCGCAAAAGCAATTGCACGTGAAGCTGGTGCAAGTTTCATCAATGTTCCAATATCTGCCATCACATCAATGTGGTTTGGAGAAGCCGAGAAGAATGTTCGAGCTCTCTTCACACTGGCTTCAAAGGTTTCTCCAGCAATTATTTTCATCGATGAGGTTGATAGCTTGCTCAGCCAACGGGCGAGATATGGAGAGCATGAGGGTACAAGAAGGATTAAGAATGAGTTCATGACCCATTGGGATGGTTTACTGACTAAACAAGATGAGAGAATTCTTGTTCTTGCTGCAACCAACAGGCCATTTGACCTTGACGATGCAATCATAAGACGGTTTCAGCGAAGAATCATGGTTGGTCTTCCATCAGCTGAGACTAGGGAGATTATCTTGAAAACTATACTAGCTAAGGAAAATACTGAAAATTTAGACTTCAAAGAGCTTGCAATCTTCACAGAGGGATATACCGGAAGCGACCTCAAGAATTTGTGCACTGCTGCTGCCTATCGACCTGTTAGGGAGCTGATAAAGCAGGAGAGATTGAAAGATATGGAAAAGAACAAAAAAGAGGCTGAAGGCCAAAGCTCAGAAGCTGCTGCAAAAACCAAAGAGGATACAAAAGAGAGAGAAAAGAATAAGAATGATGCTGAAGACCAAAGCTCAGAAGCCGCTTCAAGTGCTAAGGAGGTCAAAGAAGATCCAGTAATTACCTTGAGGCCTATAAACATGGAAGACATGATTGAGGCTAAGAAACAGGTTCCTGCAAGTTTTGATGCTGATGGATTAATAATGCATGAACTGAAGGAGTGGAATGAGCTGTACGGAGAACGAGATGTTCAAAGGATCGTGTCTCCAGTGCCATCACTGAAGAGAGGCTCTGATGCCAAATTGTCTTCCAAAAGGTCCTTATCCGAGGTGGCTACCAACATTTGCATCGATGAAGAACTGTTCATGCAATTGCTTCATAAGGTCTTGGTTTCTGTCTCAGAAAAAAGTTCCATCATATTATACATTAGGGATGTCGACAAGATCTTTCTGCAATCAGAACAATTATATAACTTGTTCCATGAAATTCTTGAGAAACTTTCAGGGCCAATTTTAATACTTGGCTCCCAAATATCTGAGGTCGAAGATAGATTGCCACCAAATGGGTGGTTACCGTGTTATATTCCAGAGGCTGATGCAGAATCTGATGAAAGGCTCGCCGCATTATTCCCTTACAAGATTAAGATCAAAGCTCCTAAAGATGAGAATAATCTTGAAAACTGGAAAGCACAACTAAAGGAGAACAAGAAAACAATTCAGTCTCAAGATAACCAAAACCACATTGCTAAAGTACTTGCAGCAATTGATGTTGAATGTACACACTTGAATTCAATAAGCCACGAGGATACAAACATACTAGGCAAATACATTGAAGAAATTGTGGCATCTTCAGTATCTTACTACTTGATGAATACCAAGGATCCGGAATATCATAATGGAAAGCTTGTAATATCATCAGAAAGTTTGTGTCACGGTTTGGATCTATTCCGCGAAAGCAATAGTGTCAAGGATACTCAGAAGCAAGAGACTGATGGAAACAAAGAAATGAAAAAAAATGATGCTGAAGGCCAAAGCTATGAAGCTGCTTCAAGTGCGAAGGAGGACAAGGAAGATCCAGTAATTACCTTGAGGCCTATAAACATGGAAGACATGATTCAGGCTAAGAAACAAGTTCCTGCAAGTTTTGATGCTGATGGATTAATAATGCAAGAATTGAAGGAGTGGAACAAGCTGTATGGAGAAAGAGGTTTGCGGTAG 3225 0.4009 MEQKQVLLSALGVGVGVGVGLGLSSRLGGNNGNSSEEELWNEQVKQELMRQVIDGKEFKETFQNFPYYLSERTRELLKSAAFVQLKELHFSRHIRNLPPASRTILLSGPAELYLQTIAKALAHHFESKLLLLDIVDFSFKSSKRSLSEVASKRLTGLFGYFSTSKTEDPLKNKSNISIEDQLFMQLLYKVLISVSEKSSIILYIRDVDKIFLQSEQLYNLFQEIIEKLSGPILILGSQITDVEVECLEDELLGNGWFPCYAPQPDAEVDERLAAMFPYNIKINPPKDENNLQNWKTQLEENNKTTQSQDNKNHIAKVLAEIDVECKDLNSISHEDTEILSKNIEEIVVSAVSYYLMNTKDPEYHNGKLVISSQSLCHGLDLFRKTDSVKDTQKPETDEKKEVPPDNRYEENIRSELIPANEIGVTFSDIGALEEVKESLQELIMLPLRRPELFKSGLLKPCRGILLFGPPGTGKTMLAKAIAREAGASFINVPISAITSMWFGEAEKNVRALFTLASKVSPAIIFIDEVDSLLSQRARYGEHEGTRRIKNEFMTHWDGLLTKQDERILVLAATNRPFDLDDAIIRRFQRRIMVGLPSAETREIILKTILAKENTENLDFKELAIFTEGYTGSDLKNLCTAAAYRPVRELIKQERLKDMEKNKKEAEGQSSEAAAKTKEDTKEREKNKNDAEDQSSEAASSAKEVKEDPVITLRPINMEDMIEAKKQVPASFDADGLIMHELKEWNELYGERDVQRIVSPVPSLKRGSDAKLSSKRSLSEVATNICIDEELFMQLLHKVLVSVSEKSSIILYIRDVDKIFLQSEQLYNLFHEILEKLSGPILILGSQISEVEDRLPPNGWLPCYIPEADAESDERLAALFPYKIKIKAPKDENNLENWKAQLKENKKTIQSQDNQNHIAKVLAAIDVECTHLNSISHEDTNILGKYIEEIVASSVSYYLMNTKDPEYHNGKLVISSESLCHGLDLFRESNSVKDTQKQETDGNKEMKKNDAEGQSYEAASSAKEDKEDPVITLRPINMEDMIQAKKQVPASFDADGLIMQELKEWNKLYGERGLR 1074
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g1561 1074 Coils Coil 894 914 - -
Alju04g1561 1074 SMART AAA_5 460 597 IPR003593 GO:0016887
Alju04g1561 1074 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 747 766 - -
Alju04g1561 1074 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 468 487 - -
Alju04g1561 1074 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 788 1008 - -
Alju04g1561 1074 Pfam AAA+ lid domain 616 660 IPR041569 -
Alju04g1561 1074 Coils Coil 648 707 - -
Alju04g1561 1074 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 422 651 IPR027417 -
Alju04g1561 1074 Gene3D - 424 733 IPR027417 -
Alju04g1561 1074 Gene3D - 597 730 - -
Alju04g1561 1074 MobiDBLite consensus disorder prediction 989 1011 - -
Alju04g1561 1074 MobiDBLite consensus disorder prediction 989 1026 - -
Alju04g1561 1074 MobiDBLite consensus disorder prediction 659 706 - -
Alju04g1561 1074 ProSitePatterns AAA-protein family signature. 567 586 IPR003960 GO:0005524|GO:0016887
Alju04g1561 1074 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 423 598 - -
Alju04g1561 1074 Pfam ATPase family associated with various cellular activities (AAA) 464 594 IPR003959 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g1561 Alju-ChrAlju04 36991728 37003933 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g1561 424 655 Calmodulin-binding Proteins AT3G56690 40.336 3.55e-41 162