Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g1556 ATGGATAGGAGAGGAGTTCCTAGAGAAGCAGATTCTTACCGGCTGCTTATTGAGAGCTGCTTGAGGAAAGGTGAACCAGCTGATGCTAAAACAGCTTTGGATAGCATGCTTGAAAGTGAGCTCCTGCCAGATTCATCCCTTTATAGGTCAGTTATGGAGAGTTTGTTTAGTGATGGCAGGTCTTCTTCCCTTTCGCCGGCCGCACAGTCTATATCTCCTTCTCCTTCTCCGTTTTCGTCATCCTCATCCACGCAGTCGCTGCTGCTTAGCTCGGTGCCGGCTGAGGTGGTGGTGACACATGGTGCTGAACAGTTTGATGGGACTAGCCCTTCAGGAGAGAAATTCCATAACCATCGGCAAGTACAGCGTCGTCAATCCGAACGAAGGCTTTCCCTTACCCGATACTCACAAAGTCACCATCAGGGTGGAGGCTGGAGATTACATCGCATTGGTATTGCTGCGAAGGATTGGTCTAACGTTTCTAAGAAAGGACATGTTGATGAGAAGCTTCTTGCAGGATATGCCAAGAGAGCTTCAACACTAGCATCACAGGATGGTCCAGCTTATGTGCCTGTGTTTGTTCATGTTTTGTTTGATATACATAAAGATGAGACAGCGGAATACGTTCTGCCCTTAATAGATGAAACGCTTACAGATTGCTTTAGAAAGGAAATTGGTTCATACAAGAGAAAAGTTGTAAGATCCTTGCTTTACTAG 717 0.4616 MDRRGVPREADSYRLLIESCLRKGEPADAKTALDSMLESELLPDSSLYRSVMESLFSDGRSSSLSPAAQSISPSPSPFSSSSSTQSLLLSSVPAEVVVTHGAEQFDGTSPSGEKFHNHRQVQRRQSERRLSLTRYSQSHHQGGGWRLHRIGIAAKDWSNVSKKGHVDEKLLAGYAKRASTLASQDGPAYVPVFVHVLFDIHKDETAEYVLPLIDETLTDCFRKEIGSYKRKVVRSLLY 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g1556 238 NCBIfam pentatricopeptide repeat 12 44 IPR002885 -
Alju04g1556 238 MobiDBLite consensus disorder prediction 103 142 - -
Alju04g1556 238 MobiDBLite consensus disorder prediction 62 84 - -
Alju04g1556 238 Gene3D Tetratricopeptide repeat domain 1 70 IPR011990 GO:0005515
Alju04g1556 238 MobiDBLite consensus disorder prediction 112 134 - -
Alju04g1556 238 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 9 43 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g1556 Alju-ChrAlju04 36499986 36506834 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g1556 160 218 Primary Pumps ATPases(2) AT3G42050 49.206 1.29e-07 49.7