Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g1544 ATGGAATTTAACCTACTTTCACAACATAAAGTCATCACTTTTGTTTTTGGTTCTGCAAAACCAGACATTATGGGAGGTTTCACTAACCTCATCTTCTTCGTCATCACTTTCCTTTCTTTCTTCCCTGCAATTTCATTCTCTTCAGATACCTTGAACTCAACCCAATCTCTCAAAACCAACGACACACTTCTCTCAGCAAATCAAACTTTCGTTCTAGGTTTCTTCTCTTCAGATGAATCAAGATTCTACCTGGGAATCTGGTACAAGAACATTCAAGTTCGTACAGAGGTTTGGGTCGCAAACAGAGACAACCCACTTGAGGATCCAAATGGGTTCCTCAAGATCGGAGACACAGGAAGCATGGAGATTATGGATCAAACCGGGAAACTCGTATGGTCATCGAACCAAACCGCCACAGCAAAAAACCCGGTTCTTCAGATTCTTGATTCAGGTAATCTGATCATCAGAGAATCTTCTGCATCTACCTCGAAGAATCCCTTGTGGCAAAGCTTCGATTACCCCACAGACACTCTCTTACCGGGCATGAAGCTTCTGTATAACTTCGACACGAAAATGGAGAAACACATAACATCGTGGAAATCAAATCAAGATCCATCCACAGGTGTTATCTCCTTCAAGCTTGATTTCCATGGCCTCCCGGAGATTTTCCTATGGAACAACAACACAAAATTGTACCGAAGCGGACCTTGGAACGGCGTGAGATTCAGCGGGGTCCCGGAAATGAAATCTGAGACCGACTCGATCAAGTTCGACTTCTACGAGGATGAACACCAATTATACTACACGTTCAACATCGGAACCCAGTCGTTGTATTCGAGACTCACCGTAACCCCGGACGGCCAGCTTCAACGGTTAACCTGGGTACCAGACAACCAAGTTTGGACACAATTCTGGTTCGCGCCAAAAGATCAATGCGATAGCTACAAAGAATGTGGCCCTTATGGGATATGTGACACAAATGCTTCACCAGTTTGTACTTGCATGAGAGGGTTTAGCCCTAAGAACATACAAGCTTGGAATCTGAGAGATGGGTCTGATGGGTGTGTGAGGAATACGAAGTTAGATTGTGGGAGTGATAAGTTTTTTAAGGTTCAGAACGTGAAGTTGCCGGATTCAACGTCGGTGTTTGTGAATAGAAGCATGAACTTAATGGAGTGTGAAGGTTTGTGTAAGAAGAATTGTTCATGCACTGCTTATGCAAATATAGATATTACCAATGGAGGAAGTGGGTGTGTTATGTGGACTGATGAACTTGTAGATATGAGGGTTTATACTGATGGAGGACAAGATCTTTATGTCAGATTAGCCGCTTCCGATGTAGGTGGAGGATCTAAGAACAGTGTGGAATCTAAAGCTATAGGCATTACAGTTGCCATAGTTGTTGTACTAGTGGGATTACTCATTTATTTCCTCTGGAAGAGAAGGAAATTACAAAGAATGTTAAAATGCAGGACTGAATCTAGAGGCGGTTTTGAGAGAAGTCAAGATTCTCTAAAGAAAGAACCAATGTTCACAAGTAACAGAAGAAACTCTAGTGAAAGTGAGATGGATGAGCTAGAGTTGCCATTGTTCGATTTTAACACCATATCAACGGCTACAAACAACTTCTCTGAAGAAAACAAGCTTGGAGAAGGAGGCTTTGGTAGTGTTTACAAGGGTAGATTAGTGGAAGGCCAAGAAATCGCCGTGAAAAGGCTATCGAGGAACTCTGGGCAAGGAACTGAACAATTTAAGAATGAGGTCAGGTTAATTGCGAGACTTCAACATAGGAACCTTGTTCGGTTGTTTGGTTATTGTGTTGAGATGGATGAGAAGATATTGGTTTATGAGTACATGGAGAATAGAAGCCTTGATTCTATTTTGTTTGATAAAGTAAGAAGATCCATATTGAATTGGCAAAAGCGCTTTCACATGATATGTGGAATTGCAAGAGGACTTCTTTATCTACATCAAGATTCTAGATTCAGGATCATCCATAGGGATCTTAAAGCTAGCAATGTCCTACTTGATGAGGAAATGAATCCAAAGATATCAGATTTTGGGATGGCAAGAATTTTCGGAACAAATCAAACAGAAGCAAATACATTAAGAATTGTCGGGACATACGGCTACATGTCTCCGGAATATGCTATGGATGGACTCTTCTCAGTAAAGTCTGATGTTTTTAGTTTTGGGGTTCTAGTTCTTGAGATCATAACCGGCAGGAAAAACAAAGGGTTCTATTACTCAAACGACGAATTAAATCTTCTTGGACATGCATGGAATCAATGGAAAGAAGGAAAAGCACTGGAACTGACTGATCCATCGATCGGTGATTCGTATTCACCACCCGACTTTCTCCGATGCATACAAGTCGGACTCCTGTGTGTTCAAGAGCGAGCAGAAGATCGGCCATCAATGTCAACTGTGGTGTTGATGTTGAGCAGTGAAACTGTGTTGATGCCACAGCCTAAAACCCCTGGGTTTTGTGTAGGAAGAAACCCTAATGAAACAGAGTCTTCTTCAAGTAAACAAGACCAATCATATAGTGTGAATGAAGTCACAGTCACAATGCTAAATGCTAGGTAA 2589 0.4168 MEFNLLSQHKVITFVFGSAKPDIMGGFTNLIFFVITFLSFFPAISFSSDTLNSTQSLKTNDTLLSANQTFVLGFFSSDESRFYLGIWYKNIQVRTEVWVANRDNPLEDPNGFLKIGDTGSMEIMDQTGKLVWSSNQTATAKNPVLQILDSGNLIIRESSASTSKNPLWQSFDYPTDTLLPGMKLLYNFDTKMEKHITSWKSNQDPSTGVISFKLDFHGLPEIFLWNNNTKLYRSGPWNGVRFSGVPEMKSETDSIKFDFYEDEHQLYYTFNIGTQSLYSRLTVTPDGQLQRLTWVPDNQVWTQFWFAPKDQCDSYKECGPYGICDTNASPVCTCMRGFSPKNIQAWNLRDGSDGCVRNTKLDCGSDKFFKVQNVKLPDSTSVFVNRSMNLMECEGLCKKNCSCTAYANIDITNGGSGCVMWTDELVDMRVYTDGGQDLYVRLAASDVGGGSKNSVESKAIGITVAIVVVLVGLLIYFLWKRRKLQRMLKCRTESRGGFERSQDSLKKEPMFTSNRRNSSESEMDELELPLFDFNTISTATNNFSEENKLGEGGFGSVYKGRLVEGQEIAVKRLSRNSGQGTEQFKNEVRLIARLQHRNLVRLFGYCVEMDEKILVYEYMENRSLDSILFDKVRRSILNWQKRFHMICGIARGLLYLHQDSRFRIIHRDLKASNVLLDEEMNPKISDFGMARIFGTNQTEANTLRIVGTYGYMSPEYAMDGLFSVKSDVFSFGVLVLEIITGRKNKGFYYSNDELNLLGHAWNQWKEGKALELTDPSIGDSYSPPDFLRCIQVGLLCVQERAEDRPSMSTVVLMLSSETVLMPQPKTPGFCVGRNPNETESSSSKQDQSYSVNEVTVTMLNAR 862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g1544 862 MobiDBLite consensus disorder prediction 825 851 - -
Alju04g1544 862 FunFam Receptor-like serine/threonine-protein kinase SD1-8 43 171 - -
Alju04g1544 862 Pfam PAN-like domain 363 428 IPR003609 -
Alju04g1544 862 Gene3D Transferase(Phosphotransferase) domain 1 619 821 - -
Alju04g1544 862 ProSiteProfiles Bulb-type lectin domain profile. 48 168 IPR001480 -
Alju04g1544 862 SMART ntp_6 363 442 IPR003609 -
Alju04g1544 862 Pfam D-mannose binding lectin 95 200 IPR001480 -
Alju04g1544 862 CDD PAN_AP_plant 359 443 - -
Alju04g1544 862 PIRSF SRK 23 862 IPR024171 GO:0004674
Alju04g1544 862 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 35 805 - -
Alju04g1544 862 ProSitePatterns Serine/Threonine protein kinases active-site signature. 664 676 IPR008271 GO:0004672|GO:0006468
Alju04g1544 862 Pfam S-locus glycoprotein domain 232 342 IPR000858 GO:0048544
Alju04g1544 862 SMART serkin_6 543 819 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g1544 862 MobiDBLite consensus disorder prediction 499 521 - -
Alju04g1544 862 Gene3D Phosphorylase Kinase; domain 1 505 618 - -
Alju04g1544 862 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 507 618 - -
Alju04g1544 862 ProSiteProfiles Protein kinase domain profile. 543 820 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g1544 862 ProSitePatterns Protein kinases ATP-binding region signature. 549 571 IPR017441 GO:0005524
Alju04g1544 862 Gene3D - 43 171 IPR036426 -
Alju04g1544 862 CDD B_lectin 54 174 IPR001480 -
Alju04g1544 862 Gene3D Hepatocyte Growth Factor 360 442 - -
Alju04g1544 862 ProSiteProfiles PAN/Apple domain profile. 363 443 IPR003609 -
Alju04g1544 862 SUPERFAMILY Protein kinase-like (PK-like) 515 814 IPR011009 -
Alju04g1544 862 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 619 822 - -
Alju04g1544 862 CDD STKc_IRAK 549 814 - -
Alju04g1544 862 SMART blect_4 54 174 IPR001480 -
Alju04g1544 862 SUPERFAMILY alpha-D-mannose-specific plant lectins 96 205 IPR036426 -
Alju04g1544 862 MobiDBLite consensus disorder prediction 833 851 - -
Alju04g1544 862 Pfam Protein tyrosine and serine/threonine kinase 546 812 IPR001245 GO:0004672|GO:0006468
Alju04g1544 862 Pfam Domain of unknown function (DUF3403) 816 862 IPR021820 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g1544 Alju-ChrAlju04 35374659 35381964 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g1544 520 858 Receptor kinase-like Gene Family AT4G23150 57.227 1.37e-132 409
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Alju04g1544 PK_Tyr_Ser-Thr 2.7e-47 CL0016