Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g1543 ATGGTTCTTACACAAACAACTGTACTTTTTCTTATTCTATTCCCATTCTTGTTCATTCTCTGTTTCTTTACTCAGTTCTCACATGCAGCGAGTTCCATCAAACGAGGCATATTGATCAGAGACGTACCAGACGGTGAAACTTTACTCTCAGAAGAACTCAATTTCGAACTTGGATTCTTCAGTTTAGATAATAACAGCTCTTTGAGATACGTTGGAATTTGGTATTATAAAATTCCCGGAGCAGCATTCATATGGGTTGCGAACAGAGACAGACCCATCATAGGCAGAGTAGGGGTTATAACTATTGGTATCGATGGGAATTTGGTCATCTTCGATGGGGATAAGAATCAAGTATGGTCGAGCAAAGTATCGAACACCAAGAATAATAACACAGAAGCTGTTCTTCGAGATGATGGAAACCTTGTTCTTTCCACTAACGATGATGATGATGAAAGAGAATTATGGAGAAGCTTTGATAATCCAACCGACACGTTTGTTCCAGGTATGACCATACCAGTGAATCCCTCAAAAGGCGAGATTCGACCTTTTGTGTCATGGAAATCTAGCACAGATCCTGCTCGAGGAAATTTCTCAATGGGAATCGACCCACGAGCATCAACCCAGATAGTGATTTGGGAAGGAGCTAAAAGGAGGTGGAGAAGTGGGTATTGGGATGGAAGAATATTCACAGGAGTTTCAAACATGACAGGAAGTTATCTCTATGGATTCAGACTCAACACTGATGGAAATGGAGAAAGGCATTTAGCTTATACCTCATTGGTGAACTCTGAGAAGGTGAGGTTTCAGATAAGTTGGGATGGGTTTGAGAGGCAATATAAATGGAATGATGGTGAGAAACGGTGGGATAGAACACAAGAAGAGCCATATAACAATTGTGAGATTTATAACAAGTGTGGGAGTTTTGCAGAATGCAGTTTGGCTTCTCCAATGAAATGTGTTTGCTTAAGAGGGTTCGAGCCGAAGGAAGTGGACGAGTGGACTAAAGGGAATTGGTCTGGTGGGTGTAAGAGGATGACACCATTGAAAGCTGAGAGGAATAGTAACGGTAATAATGGTAGTTCTGCTGCTGCAACAGAAGTGGATGTTGAAGAAGATGGTTTCTTTAAGTTGCAATGCAGGAAGTTGCCTGATTTCGCGACGCTGGTGGGTCCTCAGGACAAGAATAATTGTGAGAGTTATTGCTTGCAGGATACAAATTGTACTGCATATACTTCTGTTAATGGAATTGGATGCTTGATTTGGCATGGTGAGTTACTTGATATTAAGGACTTTGAAGATGGAGGAGGAAATACACTCTATATTCGCCTTGCTCATTCTGATTTAGGTGATGGGAAGAAGAAGATCAAGATTGTGATAATATTTTCCGTTGTGTTGGGGTCAATCTTCCTCGGAATCTTTCTTTGGCTGGTGTGGAGGTTCAGGGGAAGAAAAGCAGTTGCTGCAGCTTCATGCTGCAAAACAAGCGATATTCCAGTTTTTGATATTACGAGAAGCAAGAGTAGACAAGTTTCAACAGAATTTTCGGGATCAGCTGAACTGAGTTTGGAAGGTCATGAACTAAGTGGACCAGAATTGCCATTATTCAATTTTGATTGTATTGCAATAGCCACAGACAATTTCTCAGATGAAAATAAGCTTGGCCAAGGAGGATTTGGTCCTGTCTATAAGGGAAAGCTTCGCGGGAGCGAGCAAATTGCTGTCAAGAGGCTTTCAAGAAGATCTGGGCAAGGTCAAGAGGAGTTTAAGAATGAGATGATGTTGATTGCCAAACTACAACATAGAAACCTTGTTAGACTATTAGGATGTTCCATTCAAGGAGAAGAGAAGTTGTTGGTATATGAATACATGCCAAACAAAAGCCTTGATCACTTTTTATTTGATCCTGTAAGACAGCAGCAACTAAATTGGAATAAGCGATTTGAAATCATTGAAGGGATTGCAAGAGGGTTGCTTTATTTGCACAGAGATTCAAGACTTCGAATAATTCATCGAGACTTGAAAGCAAGTAACATTCTTTTGGATGAAGATATGAACCCAAAAATTTCAGATTTTGGGCTAGCGAGGATATTTGGAGGAGGCCAATGCGAGGTGAACACTACCAGAGTAGTCGGCACATATGGCTACATGTCCCCTGAATATGCAATGGAAGGTCTATTTTCAGTTAAATCGGATGTCTATAGTTTTGGTGTATTATTACTTGAGATTGTAAGTGGGCGCAAAAACACTAGCTTTCGCCATTCCGATGACTCGAGTCTCATAGGATATGCCTGGCATCTTTGGAATGAACAAAGAGCAATGGAGCTTGTTGATCCTTCCATTCGTGATTCGAGTCTGAAGAACCAGCAGGTTTTGAGATGCATACACATAGGGATGTTGTGTGTGCAGGATTCAGCAGCTCATAGACCAACCATGTCTTCTGTGGTATTGATGCTAGAAAGTGAAGCAACCAATCTTCCTTTGCCTAAACAGCCTTTGCTTACTTCCATGAGAAGAAGATCTGAAGACAGAGAGTTTTATATGGAAGGTCTTGATGTTTCCTTGAATGAGCTTACAGTTACAATGGTTTTAGGGAGATAG 2598 0.4095 MVLTQTTVLFLILFPFLFILCFFTQFSHAASSIKRGILIRDVPDGETLLSEELNFELGFFSLDNNSSLRYVGIWYYKIPGAAFIWVANRDRPIIGRVGVITIGIDGNLVIFDGDKNQVWSSKVSNTKNNNTEAVLRDDGNLVLSTNDDDDERELWRSFDNPTDTFVPGMTIPVNPSKGEIRPFVSWKSSTDPARGNFSMGIDPRASTQIVIWEGAKRRWRSGYWDGRIFTGVSNMTGSYLYGFRLNTDGNGERHLAYTSLVNSEKVRFQISWDGFERQYKWNDGEKRWDRTQEEPYNNCEIYNKCGSFAECSLASPMKCVCLRGFEPKEVDEWTKGNWSGGCKRMTPLKAERNSNGNNGSSAAATEVDVEEDGFFKLQCRKLPDFATLVGPQDKNNCESYCLQDTNCTAYTSVNGIGCLIWHGELLDIKDFEDGGGNTLYIRLAHSDLGDGKKKIKIVIIFSVVLGSIFLGIFLWLVWRFRGRKAVAAASCCKTSDIPVFDITRSKSRQVSTEFSGSAELSLEGHELSGPELPLFNFDCIAIATDNFSDENKLGQGGFGPVYKGKLRGSEQIAVKRLSRRSGQGQEEFKNEMMLIAKLQHRNLVRLLGCSIQGEEKLLVYEYMPNKSLDHFLFDPVRQQQLNWNKRFEIIEGIARGLLYLHRDSRLRIIHRDLKASNILLDEDMNPKISDFGLARIFGGGQCEVNTTRVVGTYGYMSPEYAMEGLFSVKSDVYSFGVLLLEIVSGRKNTSFRHSDDSSLIGYAWHLWNEQRAMELVDPSIRDSSLKNQQVLRCIHIGMLCVQDSAAHRPTMSSVVLMLESEATNLPLPKQPLLTSMRRRSEDREFYMEGLDVSLNELTVTMVLGR 865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g1543 865 Pfam S-locus glycoprotein domain 219 328 IPR000858 GO:0048544
Alju04g1543 865 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 512 622 - -
Alju04g1543 865 ProSiteProfiles PAN/Apple domain profile. 369 444 IPR003609 -
Alju04g1543 865 CDD B_lectin 44 161 IPR001480 -
Alju04g1543 865 Pfam PAN-like domain 370 428 IPR003609 -
Alju04g1543 865 Gene3D Phosphorylase Kinase; domain 1 523 622 - -
Alju04g1543 865 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 623 826 - -
Alju04g1543 865 CDD PAN_AP_plant 368 444 - -
Alju04g1543 865 Gene3D Transferase(Phosphotransferase) domain 1 623 827 - -
Alju04g1543 865 Gene3D - 39 158 IPR036426 -
Alju04g1543 865 ProSiteProfiles Bulb-type lectin domain profile. 39 156 IPR001480 -
Alju04g1543 865 PIRSF SRK 2 865 IPR024171 GO:0004674
Alju04g1543 865 SUPERFAMILY Protein kinase-like (PK-like) 532 842 IPR011009 -
Alju04g1543 865 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 25 158 - -
Alju04g1543 865 SMART ntp_6 369 443 IPR003609 -
Alju04g1543 865 Pfam D-mannose binding lectin 83 187 IPR001480 -
Alju04g1543 865 Pfam Protein tyrosine and serine/threonine kinase 550 816 IPR001245 GO:0004672|GO:0006468
Alju04g1543 865 SMART blect_4 39 161 IPR001480 -
Alju04g1543 865 ProSitePatterns Serine/Threonine protein kinases active-site signature. 668 680 IPR008271 GO:0004672|GO:0006468
Alju04g1543 865 SUPERFAMILY alpha-D-mannose-specific plant lectins 83 192 IPR036426 -
Alju04g1543 865 ProSiteProfiles Protein kinase domain profile. 547 833 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g1543 865 CDD STKc_IRAK 553 819 - -
Alju04g1543 865 SMART serkin_6 547 818 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g1543 865 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 16 809 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g1543 Alju-ChrAlju04 35342488 35346037 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g1543 521 831 Receptor kinase-like Gene Family AT4G23230 60.577 7.52e-130 401
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Alju04g1543 PK_Tyr_Ser-Thr 1.4e-48 CL0016