Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g1537 ATGGCGACTCCCACACCAGAATACTACTGCCATGTCTCCGTTGAACCAAGTGATCCTGAAGCCTTTCAAAATCTACCGATCCAACACCACAAGACTTCAATGCTAAATTTCAATATCAAATTTTGTGTTCTTTTCGCAAAAAGTTGTTCATGTGGTCAGACTCATCTTCTTGCTATTCCCTCCATGCCAATTTCTTCCCATTACATGTCTTGCAGAGAGTTTTTCCGACGTGCTTCGAGTTTTCTACGAAGCAATTTTATGCACGATCTTATCAGCCCAGAATTGCTCAGCTTGTTGGTACCAGACATAATTTCTTGCACTCAAAAATTCTTCTATGGCAATCCTCCGTATCCTTATTTTGACGAGGATATTTTCATGGTTTATCCTCTAGCTATTGAGGTCATCGTCGAATTGCCTGAAAACATAGAAGTTGTGCACATGTCTGACGAAATATTATTCCTATCAGAACAATCCATGCAAGAGATTAATATGGTTCCTGCATCAACAGAAGCTATTGAATCGCTCAAGAAAATAAATCTTCTAGAAAATATTGATGTGAATGAGGATGAGAAGGAGAAGGACCAGTGTTGTATTTGTCTCGAAGATTTGGGGCAAGTTTCAACTATGACATATTGTCACCATATTTTTCACAATAATTGTATTGTTCGATGGCTAAAAGTTAGTCATAAGTGTCCTTTATGTCGATATCCAATGGCTAAAGCTCACCAGGACTAG 735 0.3864 MATPTPEYYCHVSVEPSDPEAFQNLPIQHHKTSMLNFNIKFCVLFAKSCSCGQTHLLAIPSMPISSHYMSCREFFRRASSFLRSNFMHDLISPELLSLLVPDIISCTQKFFYGNPPYPYFDEDIFMVYPLAIEVIVELPENIEVVHMSDEILFLSEQSMQEINMVPASTEAIESLKKINLLENIDVNEDEKEKDQCCICLEDLGQVSTMTYCHHIFHNNCIVRWLKVSHKCPLCRYPMAKAHQD 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g1537 244 ProSiteProfiles Zinc finger RING-type profile. 196 235 IPR001841 -
Alju04g1537 244 SUPERFAMILY RING/U-box 185 239 - -
Alju04g1537 244 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 153 241 IPR013083 -
Alju04g1537 244 SMART ring_2 196 234 IPR001841 -
Alju04g1537 244 Pfam Ring finger domain 194 235 IPR001841 -
Alju04g1537 244 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 79 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g1537 Alju-ChrAlju04 35215993 35216727 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g1537 115 236 C3H Transcription Factor Family AT1G68180 31.200 1.89e-10 57.4