LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Alju04g1515	ATGACCTTCCTTGGCATAACTAGGAAAACTTCATCTAACTCCCAAGACGGGCTTCTGATGAAAGGAGAGGAAGGGAGTGTTAGCTTTTCTTTTTATACAGGAAATTCTATCAAGATTTTTACTTTAGATTCTCAAGGTATACTAGAGCGAAGAGGTTGGAATTCCCAGACACATAGCTGGCAACTTTCGAGGACAGCAGGTTCTTCAGAGTGCGATGTTTATGGCAAATGTGGCCCATTTGGGATTTGCAATTTGCTGAGCTCCCCAATCTGTAGCTGCTTGAGAGGGTTTGAACCAAAGAACAAACAAGAATGGGAAAGGCAGAATTGGACCAATGGGTGTGTGAGAAGGGACCCACTTCGTTGTGAAAGAGACAAAAATGATTCTCAAACCAGCAAAATAGATGGATTTTTTATGGTGGAGAATGTGAAAGTACCAGATGATGCACAGGTGTTAGCTTCTTATGCTGAGAATGCTGCCGATTGTCAAACTTCATGCCTCAAGAATTGCTCATGTATAACTTATGCCTATGAAAGAAACCTTGGCTGTATGGTTTGGAGTGCAGATTTACTTGACATACAGAGCTTCTCATATGGAGGGCTTGACATTTACGTACGTTTAGCCAACCCGGAACCAGGGGAAATGCAGATTCATGATAAAAGGATTATGACTTTGAAGCAAGTCCATATTCCAGAGCTATTATTGTTTGATTTTAGGAAGTTGGCAACTGCAGCAAACAACTTTGATATAGAAAATAAACTTGGGCAGGGTGGCTTTGGTCCAGTTTACAAGGGAAAATTGGAAGATGGACAGGAAATAGCAGTAAAAAGACTATCAAGATCATCTGGACAGGGCATGATAGAATTTATAAATGAAGTGGAATTGATTTCTAAGCTTCAACACCGAAACCTCGTTAGACTTATTGGGTGTTGCATTGAAGGAGAAGAGATATTGGTTTATGAATATATGCCAAACAAAAGTTTGGATGCCTATATCTTTGACCCACTCCAACGAAAATCCTTTGATTGGGGAAAGCGCTCCAATGTAATTGAGGGAATAGATAAGGCAAAGACAGAACGAATTGTTGGAACATATGGATACATTTCTCCCGAGTATGCAACTCAAGGACTCTATTCGGAGAAATCTGATGTTTTTAGCTTTGGTGTTTTGTTGCTAGAGATTGTTAGTGGAAGGAGAAACACTAGCTTTTATGAAGAGGCAGAATCTTTGACACTTTTAGGATTTGCATGGAAATTATGGAATGATGGCAATGTTATACCTCTAATAGATTCGCTAATATATGATCCAAGCTCTCACAAGGATATATTGAGGTGCATACATATAGGTCTTTTGTGTGTTCAAGAACTTTCAAAAGACAGGCCCACTATGACTTGGGTAATGTCAATGCTTCAAAGTGAGATTATGGATATTCCTCCCCCAAGCCAACCCGCGTTCATCCTCAGGCAGACTATGTCTTGTGCAACAGAGCAAACTTTAGACAAGAATGAGTTATGTTCCATAAATGTAGCAACTATTTCAAATATTAAGGGGAGATAG	1557	0.3976	MTFLGITRKTSSNSQDGLLMKGEEGSVSFSFYTGNSIKIFTLDSQGILERRGWNSQTHSWQLSRTAGSSECDVYGKCGPFGICNLLSSPICSCLRGFEPKNKQEWERQNWTNGCVRRDPLRCERDKNDSQTSKIDGFFMVENVKVPDDAQVLASYAENAADCQTSCLKNCSCITYAYERNLGCMVWSADLLDIQSFSYGGLDIYVRLANPEPGEMQIHDKRIMTLKQVHIPELLLFDFRKLATAANNFDIENKLGQGGFGPVYKGKLEDGQEIAVKRLSRSSGQGMIEFINEVELISKLQHRNLVRLIGCCIEGEEILVYEYMPNKSLDAYIFDPLQRKSFDWGKRSNVIEGIDKAKTERIVGTYGYISPEYATQGLYSEKSDVFSFGVLLLEIVSGRRNTSFYEEAESLTLLGFAWKLWNDGNVIPLIDSLIYDPSSHKDILRCIHIGLLCVQELSKDRPTMTWVMSMLQSEIMDIPPPSQPAFILRQTMSCATEQTLDKNELCSINVATISNIKGR	518

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Alju04g1515	518	Gene3D	Phosphorylase Kinase; domain 1	213	322	-	-
	Alju04g1515	518	Pfam	PAN-like domain	132	193	IPR003609	-
	Alju04g1515	518	Pfam	S-locus glycoprotein domain	3	101	IPR000858	GO:0048544
	Alju04g1515	518	FunFam	G-type lectin S-receptor-like serine/threonine-protein kinase B120	352	475	-	-
	Alju04g1515	518	FunFam	G-type lectin S-receptor-like serine/threonine-protein kinase	214	322	-	-
	Alju04g1515	518	ProSiteProfiles	Protein kinase domain profile.	248	518	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Alju04g1515	518	PANTHER	BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN	23	461	-	-
	Alju04g1515	518	Pfam	Protein tyrosine and serine/threonine kinase	363	407	IPR001245	GO:0004672\|GO:0006468
	Alju04g1515	518	Pfam	Protein tyrosine and serine/threonine kinase	250	334	IPR001245	GO:0004672\|GO:0006468
	Alju04g1515	518	CDD	EGF_CA	70	101	-	-
	Alju04g1515	518	SMART	ntp_6	132	207	IPR003609	-
	Alju04g1515	518	Gene3D	Transferase(Phosphotransferase) domain 1	341	477	-	-
	Alju04g1515	518	SUPERFAMILY	Protein kinase-like (PK-like)	232	494	IPR011009	-
	Alju04g1515	518	CDD	PAN_AP_plant	119	208	-	-
	Alju04g1515	518	ProSiteProfiles	PAN/Apple domain profile.	122	208	IPR003609	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Alju04g1515	Alju-ChrAlju04	34565223	34568395	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Alju04g1515	232	485	Receptor kinase-like Gene Family	AT4G23230	45.545	2.64e-84	271

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Alju04g1515		PK_Tyr_Ser-Thr	4.2e-07	CL0016