Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g1449 ATGGCATTTGAGCCAGTGGATTGGTTTTGTCAGCCAGTGGCAAATGGAGTATGGACAAAATTGGTTCAGAATGCCTTTGGTGCTTATACTCCTTGTGCAGTTGATTCTCTTGTGATCATCATTTCGCATTTGATCCTTTTTGGCTTGTGCTTCTATCGAATATGGTTGATTAACAAGAATTTCAAAGTCAAGAGATATTGTTTGAGGTCCAAGCTTTATAATTATCTTTTGGGGTTGTTAGCTGGATATTGCACAGCTGAGCTATTATTCAGATTGGTTATGGGGCTATCGGTTTTAAATTTAGATGGGCAGACTGGTCTTGCTCCATTTGAGATGGTTTCACTCATCGTTGAGGCTCTTGCTTGGTGCTTTATGCTGGTTCTAATTCTTGTTGAAACTAGAGTTTATATCTATGAATTCCGATGGTTTGTCAGATTTGCTGTGATTTATACCATAGTGGGGGATGCTGTTATGTTCAATCTCATATTTTCCGCGAAGGAATTCTACACTAGATCGATGTTATATTTATATACAAGTGAGGTTGTCATACAGGCTTTGTTTGGAATGCTGTTACTCATGTATCTTCCTAATTTAGATCCTTATCCTGGTTATACTCCCATCCAAAGTGAACTGGTCACTGATATTGCATATGAAGAACTCCCAGGTGGGGAACAAATATGTCCCGAGAGGCATGGCAACATATTTTCAAAAATAACTTTCACTTGGATGAATCCTATAATGAAGTTGGGTTATCAACGACCGCTTACCGAGAAAGATGTATGGAAATTAGATACTTGGGATTGGACAGAGACTTTGATCAACAAGTTCCAAAGATGTTGGAATGAGGAATCTCGAAAGTCCAAACCATGGCTATTAAGAGCATTAAATAGTAGCCTTGGAGGAAGGTTTTGGTGGGGAGGCTTTTGGAAGATTGGCAATGACATTTCCCAATTTATAGGGCCTCTTATATTGAACCAGCTGCTACAGTCCATGCAAAGAGGTGAGCCGGCGTGGATTGGCTATGTGTATGCCTTCTCAATATTTGTTGGAGTGGTTTTCGGAGTTTTATGTGAAGCTCAATATTTTCAGAATGTCATGAGAGTTGGTTTTCGGCTAAGATCAACTTTGGTGGCAGCTGTGTTTCGGAAATCTTTAAAACTTACTCATGAAGCCCGAAAGCAATTTGCATCTGGGAAAATAACCAATTTGATGACTACTGATGCTGAGGCACTTCAGCAAATATGTCAGTCACTTCATACTTTGTGGTCAGCTCCATTTCGTATCATTGTTGCGCTGGTTCTTCTATACCAACAACTAGGTGTTGCTTCTCTTCTTGGCGCTTTATTGCTGGTGCTATTGTTCCCAATACAGACTTTTATCATTAGTAGAATGCAAAAGTGGTCCAAGGAAGGGTTGCAGCGTACAGACAAGAGAATTGGTCTGATGAATGAAATTTTGGCTGCTATGGACACTGTAAAATGTTATGCGTGGGAGAGTAGTTTCCAATCTAAAGTACAAGTCGTCCGAGATGATGAATTATCATGGTTCCGGAAGGCATCATTACTTGGAGCGTGTAATGGATTTATACTAAACAGCATTCCAGTTTTTGTTACTGTTATTTCATTTGGAGTATTCACCTTGCTTGGAGGGGATCTAACACCTTCGAGAGCATTCACATCCCTTTCTTTGTTCGCTGTGCTACGGTTTCCTCTCTTCATGCTTCCTAATATTATTACTCAGGTTGTTAATGCAAATGTATCCTTGAAGCGTCTAGAAGAGTTGCTCTTAGCAGAAGAACGGGCTCTTATGCCTAATCCACCTCTAGAGCCAGGATTACCAGCAATCTCAGTGAAGAATGGAAACTTTTCATGGGATGCAAAGGCTGGGAGGCCTACATTGTCTAATGTCAATTTGGATGTACCTGCGGGTAGCCTTGTTGCAATTGTGGGCAGTACTGGAGAAGGAAAGACATCACTCATATCTGCGATGCTTGGGGAGCTTCCTCCTACTGCAGATGCAACTGTTGTTATAAGAGGGACAGTTGCTTATGTGCCACAAATTTCATGGATCTTTAACGCAACTGTGCGGGATAACATTTTATTTGGCTCTCGCTTTGACCCTGTGAGATATGAGAAGGCAATAGATGTGAGTGAACTGCAGCATGACCTCGAGTTGCTTCCTGGTGGTGACCTTACTGAAATTGGTGAAAGAGGGGTAAATATCAGTGGTGGTCAAAAACAAAGGGTATCCATGGCTAGAGCTGTGTACTCCAATTCAGATGTGTACATATTTGATGACCCTTTAAGTGCTCTGGATGCGCATGTTGCAAGACAGGTGTTTGATAAATGCATCAAAGGTGAATTGAGAGGAAAAACCCGAGTCCTTGTTACAAATCAGCTACATTTCCTTTCAGAAGTTGATAGAATTATGCTGGTCCATGATGGTATGGTAAAAGAAGAGGGAACATTTGAGGAACTCTCTAACCATGGACCGCTATTCCAAAAGCTTATGGAAAATGCAGGAAAGATGGAGGAGTATGAAGAAAACAGAGACACTGAAAGTAATGATCAAAAGACCTCTTCAAAATCAGTTCCCAATGGAACACCTAATGATATGGCAAAAATTGAAAATAAGCCAAAAGAGGCCAAATCTGTTCTTATTAAGCAAGAAGAACGAGAAACAGGTGTTGTCAGTCTGAAAGTTCTACAGAGGTACAAGAATGCATTAGGAGGATTTTGGGTGGTGCTAGTGCTTTTTACATGCTATATCTTAACAGAAGTGTTGCGAGTTTCTAGTAGCACATGGTTAAGCCATTGGACTGATCAGAGTGCGTCAAAGGGTTATAATCCTGGTTACTACAATATGATCTATGCAGCTCTGTCTTTTTGTCAGGTTTTGGTGACTTTAACAAATTCTTTCTGGCTAATCATATCAAGTCTTTATGCTGCTAAAAGGTTGCATGACGCTATGCTCCACTCAATTTTAAGGGCTCCTATGTCGTTTTTTCATACCAATCCTCTTGGAAGGATCATCAATAGGTTTGCAAAGGATCTTGGTGATATAGACCGTAATGTTGCTCCATTTGTGAATATGTTTTTAAGCCAGATTTCCCAGCTTCTTTCAACATTCATCTTGATAGGGATTGTGAGCACAATGTCCTTGTGGGCAATAATGCCATTATTGGTGTTGTTTTATGGAGCCTATCTATATTATCAGAGCATGGCCCGTGAAGTGAAGCGCTTAGATTCTATCAGTAGATCCCCTGTATATGCTCAATTTGGAGAAGCACTTAATGGTCTATCAACTATCCGTGCTTACAAAGCTTATGATAGAATGGCTGACATTAATGGAAAAGCCGTGGACAATAATATACGATTCACTCTTGCGAACATGAGTGGCAACCGATGGCTTGCAATTCGTCTGGAAACTTTGGGCGGCATTATGATATGGTTTACTGCATCTTTTGCTGTATTGCAAAATGGGAGTGCTGAGAACCAGCAGGTATTTGCATCCACGATGGGGCTTCTACTTAGTTATGCTTTAAATATTACTACTTTGCTCACAGCCGTACTCAGACTTGCAAGTCTGGCTGAGAATAGTTTAAATGCTGTTGAGCGTGTGGGAACTTATGTCGATTTGCCTTCAGAGGCTCCATCTATCATTGAGAGTAACCGTCCTCCTCCTGGGTGGCCATCATCTGGGTCAATCAGATTTGAAGATGTTGTTCTTCGCTATAGGCCTGAACTTCCACCTGTCTTACATGGGTTGTCTTTCACAATTTTTCCAAGTGACAAGGTTGGCGTTGTTGGTAGGACAGGAGCAGGAAAAAGTAGCATGTTTAATGCTTTATTTCGACTTGTAGAGTTGGAAAGAGGAAAAATCTTAATTGATGACTGTGAAATTGCTAAGTTTGGACTGACTGATTTACGTAAAGTTCTTGGGATTATCCCACAATCACCTGTTCTCTTTTCAGGAACTGTGAGATTTAATCTTGATCCTTTTAATGAGCACAATGATGCTGACCTTTGGGAGGCTCTGGAGAGAGCACATTTGAAGGATGTGATTCGAAGGAGTTCACTGGGGCTGGAAGCTGAGGTATCTGAGGGAGGAGAGAATTTCAGCGTTGGACAGAGGCAACTATTGAGTCTTGCTCGTGCATTATTACGGAGATCAAAGATATTGGTACTTGATGAGGCAACTGCAGCGGTTGATGTCAGAACTGATGCACTAATACAGAAAACAATTCGAGAAGAGTTTAAATCCTGTACCATGTTAATTATAGCTCATAGACTAAATACCATTATTGACTGTGATCGGATCCTTCTGCTTGATGGTGGTCGGATTCGTGAATATGGGACGCCTGAGGAGCTACTATCAAACGACAGTAGTGCTTTCTCAAAGATGGTGCAAAGTACTGGAGCTGCAAATGCTCAATATCTACGCAGCTTATTGCCCAATGGGGATGGTGGAAACAAGCAAGTGCAAGAGGGGAATCGTCTCGATGGACAGCGGAAATGGTTAGCTTCGTCTCGCTGGGCAGCTGCAGCACAATTTGCCCTTGGTGTCAGCATGACCTCATCCCAGAATGATCTTCGCCAACTGGAAATTGAAGATGACAACAGTATTCTCAAGACGGCCAAGGACGCCGTGATAACATTGCAGGGAATTTTGGATGGAAAGCATGATAAACAAATTGGGGAATCCTTGGACCAACACCAGATATCACCAAACAGATGGTGGTCATCCTTGTTCAAGATGATTGAGGGTCTGGCTATGTTGAGTAGATTGGCCCGAAACAGGTTACATGAATCTGACTACAATTTTGAAGACACCCCAATAGATTTCGACCATGTTGATATGTAA 4863 0.415 MAFEPVDWFCQPVANGVWTKLVQNAFGAYTPCAVDSLVIIISHLILFGLCFYRIWLINKNFKVKRYCLRSKLYNYLLGLLAGYCTAELLFRLVMGLSVLNLDGQTGLAPFEMVSLIVEALAWCFMLVLILVETRVYIYEFRWFVRFAVIYTIVGDAVMFNLIFSAKEFYTRSMLYLYTSEVVIQALFGMLLLMYLPNLDPYPGYTPIQSELVTDIAYEELPGGEQICPERHGNIFSKITFTWMNPIMKLGYQRPLTEKDVWKLDTWDWTETLINKFQRCWNEESRKSKPWLLRALNSSLGGRFWWGGFWKIGNDISQFIGPLILNQLLQSMQRGEPAWIGYVYAFSIFVGVVFGVLCEAQYFQNVMRVGFRLRSTLVAAVFRKSLKLTHEARKQFASGKITNLMTTDAEALQQICQSLHTLWSAPFRIIVALVLLYQQLGVASLLGALLLVLLFPIQTFIISRMQKWSKEGLQRTDKRIGLMNEILAAMDTVKCYAWESSFQSKVQVVRDDELSWFRKASLLGACNGFILNSIPVFVTVISFGVFTLLGGDLTPSRAFTSLSLFAVLRFPLFMLPNIITQVVNANVSLKRLEELLLAEERALMPNPPLEPGLPAISVKNGNFSWDAKAGRPTLSNVNLDVPAGSLVAIVGSTGEGKTSLISAMLGELPPTADATVVIRGTVAYVPQISWIFNATVRDNILFGSRFDPVRYEKAIDVSELQHDLELLPGGDLTEIGERGVNISGGQKQRVSMARAVYSNSDVYIFDDPLSALDAHVARQVFDKCIKGELRGKTRVLVTNQLHFLSEVDRIMLVHDGMVKEEGTFEELSNHGPLFQKLMENAGKMEEYEENRDTESNDQKTSSKSVPNGTPNDMAKIENKPKEAKSVLIKQEERETGVVSLKVLQRYKNALGGFWVVLVLFTCYILTEVLRVSSSTWLSHWTDQSASKGYNPGYYNMIYAALSFCQVLVTLTNSFWLIISSLYAAKRLHDAMLHSILRAPMSFFHTNPLGRIINRFAKDLGDIDRNVAPFVNMFLSQISQLLSTFILIGIVSTMSLWAIMPLLVLFYGAYLYYQSMAREVKRLDSISRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKAVDNNIRFTLANMSGNRWLAIRLETLGGIMIWFTASFAVLQNGSAENQQVFASTMGLLLSYALNITTLLTAVLRLASLAENSLNAVERVGTYVDLPSEAPSIIESNRPPPGWPSSGSIRFEDVVLRYRPELPPVLHGLSFTIFPSDKVGVVGRTGAGKSSMFNALFRLVELERGKILIDDCEIAKFGLTDLRKVLGIIPQSPVLFSGTVRFNLDPFNEHNDADLWEALERAHLKDVIRRSSLGLEAEVSEGGENFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDGGRIREYGTPEELLSNDSSAFSKMVQSTGAANAQYLRSLLPNGDGGNKQVQEGNRLDGQRKWLASSRWAAAAQFALGVSMTSSQNDLRQLEIEDDNSILKTAKDAVITLQGILDGKHDKQIGESLDQHQISPNRWWSSLFKMIEGLAMLSRLARNRLHESDYNFEDTPIDFDHVDM 1620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g1449 1620 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 612 838 IPR027417 -
Alju04g1449 1620 SMART AAA_5 1262 1455 IPR003593 GO:0016887
Alju04g1449 1620 SMART AAA_5 642 821 IPR003593 GO:0016887
Alju04g1449 1620 FunFam ABC transporter C family member 2 609 855 - -
Alju04g1449 1620 SUPERFAMILY ABC transporter transmembrane region 289 595 IPR036640 GO:0005524|GO:0016020
Alju04g1449 1620 FunFam ABC transporter C family member 2 879 1217 - -
Alju04g1449 1620 Gene3D - 609 865 IPR027417 -
Alju04g1449 1620 Pfam ABC transporter 633 768 IPR003439 GO:0005524
Alju04g1449 1620 CDD ABCC_MRP_domain1 615 815 - -
Alju04g1449 1620 Pfam ABC transporter 1253 1401 IPR003439 GO:0005524
Alju04g1449 1620 FunFam ABC transporter C family member 2 279 600 - -
Alju04g1449 1620 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 229 1476 - -
Alju04g1449 1620 Pfam ABC transporter transmembrane region 307 571 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Alju04g1449 1620 Pfam ABC transporter transmembrane region 916 1173 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Alju04g1449 1620 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 304 583 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Alju04g1449 1620 FunFam Multidrug resistance-associated protein member 4 1220 1472 - -
Alju04g1449 1620 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 916 1199 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Alju04g1449 1620 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1236 1470 IPR003439 GO:0005524
Alju04g1449 1620 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1226 1467 IPR027417 -
Alju04g1449 1620 SUPERFAMILY ABC transporter transmembrane region 912 1216 IPR036640 GO:0005524|GO:0016020
Alju04g1449 1620 CDD ABCC_MRP_domain2 1234 1454 - -
Alju04g1449 1620 ProSitePatterns ABC transporters family signature. 741 755 IPR017871 GO:0005524|GO:0016887
Alju04g1449 1620 Gene3D ABC transporter type 1, transmembrane domain 276 600 IPR036640 GO:0005524|GO:0016020
Alju04g1449 1620 Gene3D ABC transporter type 1, transmembrane domain 877 1217 IPR036640 GO:0005524|GO:0016020
Alju04g1449 1620 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 617 839 IPR003439 GO:0005524
Alju04g1449 1620 MobiDBLite consensus disorder prediction 844 875 - -
Alju04g1449 1620 CDD ABC_6TM_ABCC_D1 305 589 IPR044746 GO:0140359
Alju04g1449 1620 Gene3D - 1219 1472 IPR027417 -
Alju04g1449 1620 CDD ABC_6TM_ABCC_D2 915 1211 IPR044726 GO:0140359
Alju04g1449 1620 ProSitePatterns ABC transporters family signature. 1373 1387 IPR017871 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g1449 Alju-ChrAlju04 30051285 30101661 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g1449 595 831 Calmodulin-binding Proteins AT2G36910 28.235 7.56e-25 111