Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Alju04g1437 | ATGGCGGGTCGGTTCGGATTTGCTTCCTCCGGTTCGACATCCATGAACGTCACCAACACGCCTTCACAGGACCTTGCCCTCACCAATCTTGCCTTCTGCTCCCCTTCTGATCTTCAGAAGTTCGCTGTCTCTGGTCACAGAAACCTCTTCCTGGCTTCGATTGGCGATTCCTTTAGCATACGTAGTGGCCATATTGCACTCAACTCCATTCAACGTCGGTGTGTCAAAGTTTCTGCCGCTGAATCCGTATCTGTGAGCAGATTCATCCCACCGGACAACTTCAACCTTGCGGTGTTAACCCTTGAGCTGGACTTCATTAAAAGGGGAAGCAGAAGTGAACAAATTGATGCTGCTCTCCTGTCCAAGCAACTTAAAAAGAGATTTATAAATCAGGTCATGACAGCTGGGCAGAAAGTATTATTTGAGTTCCATGGAAATAATTATAACTTTACCATCAGTCAAGCTGTTGTTGAGGGCCAAGAAAAGTCTAATTCTCTTGAAAGAGGGATGATTTCAGATGACACATACATTATTTTTGAAGCATCACGTGACAGTGGAATTAAGATTGTCAATCAACGTGAGGCTGCTACTAGCAACATTTTTAAGCAGAAAGAATTTAATCTTCAGTCGCTTGGTATTGGAGGTCTGAGTGCGGAGTTTGCAGATATATTTCGAAGAGCTTTTGCTTCTCGTGTTTTTCCTCCTCATGTGACGTCCAAGCTAGGGATCAAGCATGTGAAGGGAATGCTGCTTTATGGGCCTCCTGGTACTGGAAAAACTCTAATGGCGCGTCAGATAGGAAAAATTTTGAATGGAAAGGAACCAAAGATTGTCAATGGCCCTGAAGTCTTGAGTAAATTTGTTGGTGAAACTGAAAAGAATGTGAGGGACCTCTTCGCTGATGCTGAACAAGATCAGAGGACCAAAGGGGATGAAAGTGATTTGCACGTCATCATTTTTGATGAAATTGATGCTATTTGTAAGTCAAGAGGTTCAACTAGGGATGGTACTGGAGTTCATGATAGTATTGTGAATCAACTTCTTACTAAGATAGATGGTGTGGAATCACTGAATAATGTTTTGCTTATTGGAATGACCAACAGAAAAGACATGCTTGATGAAGCTCTTTTAAGACCGGGCCGACTAGAAGTACAGATTGAGATAAGCCTTCCTGATGAAAATGGCCGATTGCAGATTCTCCAAATTCATACTAACAAGATGAAAGAGAATTCTTTCCTGGCTCCTGATGTGAATCTTCAAGAGCTTGCTGCTCGAACAAAAAACTACAGTGGTGCAGAACTTGAAGGTGTGGTGAAAAGTGCAGTCTCATTTGCTTTAAATAGACAACTAAGCCTTGATGATCTCACCAAGCAAGTTGAGGAAGAGAATATTAAGGTAACGATGGAGGACTTTTTGAATGCACTCCAAGAAGTTATTCCTGCATTCGGAGCTTCCACTGATGACCTTGAAAGATGCAGACTCCATGGCATGGTAGACTGCGGTGATCGACATAAGCACATTTATCAAAGGGCTATGCTACTAGCAGAGCAAGTGAAAGTGAGTATAGGAAGCCCACTTATCACTTGTCTTCTTGAGGGTACTAGTGGCAGTGGGAAAACAGCACTTGCAGCTACTGTGGGAATTGACAGTGATTTCCCATATGTCAAAATAGTTTCTGCTGAATCAATGATTGGACTACATGAGAGCACTAAATGTGCACAGATTATCAAGGTATTTGAGGATGCATACAAGTCACCATTGAGTGTCATCGTTCTTGATGACATTGAGAGGTTGTTGGAGTATGTGCCCATTGGTCCACGGTTTTCAAATTTGATTTCACAGACATTATTGGTCTTGCTTAAACGGCTTCCTCCAAAGGGTAAAAAACTGCTGGTTATTGGTACGACAAGTGAGTTGGTTTTCTTGGAGTCAGTTGGATTTTGTGATACTTTCTCTGTTACTTATCATGTTCCTACGTTGAGCACAAATGATGCGACGAAGGTGTTACGGCAGCTGAATGTTTTTACTGAGGAAGATATTGATGCTGCGGCAGAGGCCTTGAATGATATGCCTATAAAGAAGCTATACATGTTGATTGAGATGGCTGCCCAAGGAGAGTATGGTGGATCTGCAGAAGCCATATATTCTGGCGAAGAGAAGATTCAGATCTCTCACTTCTATGATTGCCTCCAAGATGTTGTTCGTATATAG | 2211 | 0.4238 | MAGRFGFASSGSTSMNVTNTPSQDLALTNLAFCSPSDLQKFAVSGHRNLFLASIGDSFSIRSGHIALNSIQRRCVKVSAAESVSVSRFIPPDNFNLAVLTLELDFIKRGSRSEQIDAALLSKQLKKRFINQVMTAGQKVLFEFHGNNYNFTISQAVVEGQEKSNSLERGMISDDTYIIFEASRDSGIKIVNQREAATSNIFKQKEFNLQSLGIGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKILNGKEPKIVNGPEVLSKFVGETEKNVRDLFADAEQDQRTKGDESDLHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQIEISLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVVKSAVSFALNRQLSLDDLTKQVEEENIKVTMEDFLNALQEVIPAFGASTDDLERCRLHGMVDCGDRHKHIYQRAMLLAEQVKVSIGSPLITCLLEGTSGSGKTALAATVGIDSDFPYVKIVSAESMIGLHESTKCAQIIKVFEDAYKSPLSVIVLDDIERLLEYVPIGPRFSNLISQTLLVLLKRLPPKGKKLLVIGTTSELVFLESVGFCDTFSVTYHVPTLSTNDATKVLRQLNVFTEEDIDAAAEALNDMPIKKLYMLIEMAAQGEYGGSAEAIYSGEEKIQISHFYDCLQDVVRI | 736 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Alju04g1437 | 736 | SUPERFAMILY | Cdc48 domain 2-like | 91 | 194 | IPR029067 | - | |
Alju04g1437 | 736 | Gene3D | - | 487 | 658 | IPR027417 | - | |
Alju04g1437 | 736 | Gene3D | - | 198 | 390 | IPR027417 | - | |
Alju04g1437 | 736 | FunFam | Vesicle-fusing ATPase protein | 12 | 88 | - | - | |
Alju04g1437 | 736 | Gene3D | - | 92 | 189 | - | - | |
Alju04g1437 | 736 | Pfam | ATPase family associated with various cellular activities (AAA) | 249 | 389 | IPR003959 | GO:0005524|GO:0016887 | |
Alju04g1437 | 736 | Pfam | ATPase family associated with various cellular activities (AAA) | 530 | 638 | IPR003959 | GO:0005524|GO:0016887 | |
Alju04g1437 | 736 | Gene3D | - | 391 | 478 | - | - | |
Alju04g1437 | 736 | Pfam | Cell division protein 48 (CDC48), domain 2 | 114 | 159 | IPR004201 | - | |
Alju04g1437 | 736 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 491 | 700 | IPR027417 | - | |
Alju04g1437 | 736 | Gene3D | - | 10 | 88 | - | - | |
Alju04g1437 | 736 | ProSitePatterns | AAA-protein family signature. | 360 | 378 | IPR003960 | GO:0005524|GO:0016887 | |
Alju04g1437 | 736 | SMART | CDC48_N_2 | 14 | 90 | IPR003338 | - | |
Alju04g1437 | 736 | PANTHER | VESICULAR-FUSION PROTEIN NSF | 13 | 735 | IPR039812 | GO:0016887|GO:0035494 | |
Alju04g1437 | 736 | FunFam | Vesicular-fusion ATPase SEC18 | 201 | 391 | - | - | |
Alju04g1437 | 736 | SMART | AAA_5 | 525 | 646 | IPR003593 | GO:0016887 | |
Alju04g1437 | 736 | SMART | AAA_5 | 245 | 392 | IPR003593 | GO:0016887 | |
Alju04g1437 | 736 | Pfam | AAA+ lid domain | 416 | 471 | IPR041569 | - | |
Alju04g1437 | 736 | FunFam | Vesicle-fusing ATPase | 92 | 189 | - | - | |
Alju04g1437 | 736 | CDD | AAA | 530 | 637 | - | - | |
Alju04g1437 | 736 | FunFam | vesicle-fusing ATPase isoform X1 | 487 | 658 | - | - | |
Alju04g1437 | 736 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 224 | 488 | IPR027417 | - | |
Alju04g1437 | 736 | CDD | RecA-like_NSF-SEC18_r1-like | 212 | 388 | - | - | |
Alju04g1437 | 736 | FunFam | Vesicle-fusing ATPase | 391 | 478 | - | - | |
Alju04g1437 | 736 | SUPERFAMILY | ADC-like | 13 | 91 | IPR009010 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Alju04g1437 | Alju-ChrAlju04 | 29785342 | 29799248 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Alju04g1437 | 240 | 456 | Calmodulin-binding Proteins | AT3G56690 | 38.914 | 3.34e-40 | 157 |