Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g1437 ATGGCGGGTCGGTTCGGATTTGCTTCCTCCGGTTCGACATCCATGAACGTCACCAACACGCCTTCACAGGACCTTGCCCTCACCAATCTTGCCTTCTGCTCCCCTTCTGATCTTCAGAAGTTCGCTGTCTCTGGTCACAGAAACCTCTTCCTGGCTTCGATTGGCGATTCCTTTAGCATACGTAGTGGCCATATTGCACTCAACTCCATTCAACGTCGGTGTGTCAAAGTTTCTGCCGCTGAATCCGTATCTGTGAGCAGATTCATCCCACCGGACAACTTCAACCTTGCGGTGTTAACCCTTGAGCTGGACTTCATTAAAAGGGGAAGCAGAAGTGAACAAATTGATGCTGCTCTCCTGTCCAAGCAACTTAAAAAGAGATTTATAAATCAGGTCATGACAGCTGGGCAGAAAGTATTATTTGAGTTCCATGGAAATAATTATAACTTTACCATCAGTCAAGCTGTTGTTGAGGGCCAAGAAAAGTCTAATTCTCTTGAAAGAGGGATGATTTCAGATGACACATACATTATTTTTGAAGCATCACGTGACAGTGGAATTAAGATTGTCAATCAACGTGAGGCTGCTACTAGCAACATTTTTAAGCAGAAAGAATTTAATCTTCAGTCGCTTGGTATTGGAGGTCTGAGTGCGGAGTTTGCAGATATATTTCGAAGAGCTTTTGCTTCTCGTGTTTTTCCTCCTCATGTGACGTCCAAGCTAGGGATCAAGCATGTGAAGGGAATGCTGCTTTATGGGCCTCCTGGTACTGGAAAAACTCTAATGGCGCGTCAGATAGGAAAAATTTTGAATGGAAAGGAACCAAAGATTGTCAATGGCCCTGAAGTCTTGAGTAAATTTGTTGGTGAAACTGAAAAGAATGTGAGGGACCTCTTCGCTGATGCTGAACAAGATCAGAGGACCAAAGGGGATGAAAGTGATTTGCACGTCATCATTTTTGATGAAATTGATGCTATTTGTAAGTCAAGAGGTTCAACTAGGGATGGTACTGGAGTTCATGATAGTATTGTGAATCAACTTCTTACTAAGATAGATGGTGTGGAATCACTGAATAATGTTTTGCTTATTGGAATGACCAACAGAAAAGACATGCTTGATGAAGCTCTTTTAAGACCGGGCCGACTAGAAGTACAGATTGAGATAAGCCTTCCTGATGAAAATGGCCGATTGCAGATTCTCCAAATTCATACTAACAAGATGAAAGAGAATTCTTTCCTGGCTCCTGATGTGAATCTTCAAGAGCTTGCTGCTCGAACAAAAAACTACAGTGGTGCAGAACTTGAAGGTGTGGTGAAAAGTGCAGTCTCATTTGCTTTAAATAGACAACTAAGCCTTGATGATCTCACCAAGCAAGTTGAGGAAGAGAATATTAAGGTAACGATGGAGGACTTTTTGAATGCACTCCAAGAAGTTATTCCTGCATTCGGAGCTTCCACTGATGACCTTGAAAGATGCAGACTCCATGGCATGGTAGACTGCGGTGATCGACATAAGCACATTTATCAAAGGGCTATGCTACTAGCAGAGCAAGTGAAAGTGAGTATAGGAAGCCCACTTATCACTTGTCTTCTTGAGGGTACTAGTGGCAGTGGGAAAACAGCACTTGCAGCTACTGTGGGAATTGACAGTGATTTCCCATATGTCAAAATAGTTTCTGCTGAATCAATGATTGGACTACATGAGAGCACTAAATGTGCACAGATTATCAAGGTATTTGAGGATGCATACAAGTCACCATTGAGTGTCATCGTTCTTGATGACATTGAGAGGTTGTTGGAGTATGTGCCCATTGGTCCACGGTTTTCAAATTTGATTTCACAGACATTATTGGTCTTGCTTAAACGGCTTCCTCCAAAGGGTAAAAAACTGCTGGTTATTGGTACGACAAGTGAGTTGGTTTTCTTGGAGTCAGTTGGATTTTGTGATACTTTCTCTGTTACTTATCATGTTCCTACGTTGAGCACAAATGATGCGACGAAGGTGTTACGGCAGCTGAATGTTTTTACTGAGGAAGATATTGATGCTGCGGCAGAGGCCTTGAATGATATGCCTATAAAGAAGCTATACATGTTGATTGAGATGGCTGCCCAAGGAGAGTATGGTGGATCTGCAGAAGCCATATATTCTGGCGAAGAGAAGATTCAGATCTCTCACTTCTATGATTGCCTCCAAGATGTTGTTCGTATATAG 2211 0.4238 MAGRFGFASSGSTSMNVTNTPSQDLALTNLAFCSPSDLQKFAVSGHRNLFLASIGDSFSIRSGHIALNSIQRRCVKVSAAESVSVSRFIPPDNFNLAVLTLELDFIKRGSRSEQIDAALLSKQLKKRFINQVMTAGQKVLFEFHGNNYNFTISQAVVEGQEKSNSLERGMISDDTYIIFEASRDSGIKIVNQREAATSNIFKQKEFNLQSLGIGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKILNGKEPKIVNGPEVLSKFVGETEKNVRDLFADAEQDQRTKGDESDLHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQIEISLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVVKSAVSFALNRQLSLDDLTKQVEEENIKVTMEDFLNALQEVIPAFGASTDDLERCRLHGMVDCGDRHKHIYQRAMLLAEQVKVSIGSPLITCLLEGTSGSGKTALAATVGIDSDFPYVKIVSAESMIGLHESTKCAQIIKVFEDAYKSPLSVIVLDDIERLLEYVPIGPRFSNLISQTLLVLLKRLPPKGKKLLVIGTTSELVFLESVGFCDTFSVTYHVPTLSTNDATKVLRQLNVFTEEDIDAAAEALNDMPIKKLYMLIEMAAQGEYGGSAEAIYSGEEKIQISHFYDCLQDVVRI 736
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Alju04g1437 736 SUPERFAMILY Cdc48 domain 2-like 91 194 IPR029067 -
Alju04g1437 736 Gene3D - 487 658 IPR027417 -
Alju04g1437 736 Gene3D - 198 390 IPR027417 -
Alju04g1437 736 FunFam Vesicle-fusing ATPase protein 12 88 - -
Alju04g1437 736 Gene3D - 92 189 - -
Alju04g1437 736 Pfam ATPase family associated with various cellular activities (AAA) 249 389 IPR003959 GO:0005524|GO:0016887
Alju04g1437 736 Pfam ATPase family associated with various cellular activities (AAA) 530 638 IPR003959 GO:0005524|GO:0016887
Alju04g1437 736 Gene3D - 391 478 - -
Alju04g1437 736 Pfam Cell division protein 48 (CDC48), domain 2 114 159 IPR004201 -
Alju04g1437 736 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 491 700 IPR027417 -
Alju04g1437 736 Gene3D - 10 88 - -
Alju04g1437 736 ProSitePatterns AAA-protein family signature. 360 378 IPR003960 GO:0005524|GO:0016887
Alju04g1437 736 SMART CDC48_N_2 14 90 IPR003338 -
Alju04g1437 736 PANTHER VESICULAR-FUSION PROTEIN NSF 13 735 IPR039812 GO:0016887|GO:0035494
Alju04g1437 736 FunFam Vesicular-fusion ATPase SEC18 201 391 - -
Alju04g1437 736 SMART AAA_5 525 646 IPR003593 GO:0016887
Alju04g1437 736 SMART AAA_5 245 392 IPR003593 GO:0016887
Alju04g1437 736 Pfam AAA+ lid domain 416 471 IPR041569 -
Alju04g1437 736 FunFam Vesicle-fusing ATPase 92 189 - -
Alju04g1437 736 CDD AAA 530 637 - -
Alju04g1437 736 FunFam vesicle-fusing ATPase isoform X1 487 658 - -
Alju04g1437 736 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 224 488 IPR027417 -
Alju04g1437 736 CDD RecA-like_NSF-SEC18_r1-like 212 388 - -
Alju04g1437 736 FunFam Vesicle-fusing ATPase 391 478 - -
Alju04g1437 736 SUPERFAMILY ADC-like 13 91 IPR009010 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Alju04g1437 Alju-ChrAlju04 29785342 29799248 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g1437 240 456 Calmodulin-binding Proteins AT3G56690 38.914 3.34e-40 157