Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g1412 ATGATGGAGAATCCTGTGTTATCGGATATAAACTTGGAAATACCCATTGGCAGCTTAGTTGCAATAGTTGGTGGTACGGGACAAGGAAAAACATCACTTGTGTCAGCAATGATTGGAGAGCTTCCTCCTATAGCTAATGCAAATGTTATAATCAGAGGCACTGTTGCTTATGTTCCTCAGATTTCATGGATTTTCAATGCTACAGTCTGTGAAAATATTCTATTTGGATCTGAGTTTGATTATGAACGGTATCAGAAGGCCATTGATGTCACAGCATTACAGCATGATATCAACTTACTTCCTGGACGTGATTTTACGGAGATTGGAGAAAGAGGAGTCAATATCAGTGGTGGTCAAAAGCAAAGAGTTTCCTTGGCAAGAGCTGTATACTCAAATTCAGATGTATATATATTTGATGATCCTTTAAGCGCCCTTGATAGTCATGTTTCCCAAAAGGTTTTCAAGAGCTGTATAAAGGAAGGGCTGCAAGGAAAAACCAGGATTCTTGTCACCAACCAACTTCATTTCCTCCCTCAGGTGGATCATATCATTCTCATTAGGGAAGGCATGATCGAAGAGCAGGGAACCTTTGAGAAGCTATCTAAAAGTGGGCCACTATTCCAGAAACTAATGGAAAATGCAGGCAAAATGGAAGAAAAACTAAATCATAAGAATTGCAGAGATATGTATGACAAAACTAATTTTCCACCAGCAACAGATGATGCGATTTTAGAGACACCAAATGGTACAAGCCATATAAAGAAGGGAAAATCGCAAAAATCCATGCTTATTAAAGAAGAAGAGCGGGAAACAGGAGTTGTTAGCTGGAAAGTTTTGACAAGATATAAGTCCGCTCTGGGAGGACTCTGGGCTGTTTTAGTACTCTTGACATGCTATGTAATGACAGAAATTCTTCGAATTTCAAGTAGCACATGGTTAAGTGTGTGGACCAATAAAAGTACCGCAGCTGGTTATGAAAAAGGATATTTTATTTTAATCTATGCACTTCTTTCATTTGGGCAGGTAGTTGTTACTCTTGTGAACTCTTATTGGATGATCATTTCAAGTCTTCGTGCTGCCAAAAGATTGCACGATGCCATGTTACATAATATGCTACGGGCTCCAATGGTATTCTTTCATACTAATCCTGTTGGACGCATACTTAATAGGTTTGCAAGAGACCTGGGAGACATTGATCGCAACATTGCTAATTTTGTGAGCATGTTTTTGGCTCAATTCTGGCAACTCCTTTCAACTTTTGTTCTTATTGGCACTGTGAGCTCATTATCCCTGTGGGCCATAATGCCACTTCTGACCTTGTTTTATGGAGCTTATTTGTATTACCAGACTACATCTCGTGAGGTGAAGAGGTTGGATTCAATTACAAGATCTCCTGTCTATGCACAGTTTGCTGAAGCATTGAATGGTTTGGCAAGCATTCGTGCTTACAAAGCATATGATAGGATAGCACAAATTAGTGGAAAATTCGTGGACAATAATATTAGATTCACTCTGGTGAACATAAGTTCAAATCGGTGGCTTACCATAAGGTTGGAAACATTAGGCGGCCTCATGATTTGGTTGATAGCAACATTTGCTGTAATGCAGAATGCAACAGCCCAAAACCAAGCCATGTTTGCATCTACAATGGGTCTACTTCTCACTTATGCTTTAAACATCACAAATATCTTGAGTCGTGTCCTTAGACAAGCTAGTAGTGCTGAAAATAGTTTAAATGCTGTTGAGCGTGTTGACACGTATATAGAATTGGAAACCGAGGCTCCAGCTATTATTGAGGGTAACCGGCCACCACCAGGATGGCCATCATCAGGATCAATTGAATTTGAGGATGTTGTCCTGCAGTATAGGCCCGAACTTCCTCCAGTCTTGCATGGGTTGTCTTTTAGAGTCTCTCCAACTGAGAAGGTAGGAATTGTTGGACGAACTGGTGCAGGAAAATCCAGCATGCTCAATGCATTATTCCGGATTGTGGAACTGCAAAAAGGAAGAATCATTATTGATGGTTGTGATATTTCTAAATTTGGAGTTGAAGATTTACGAAAAGTTCTTACTGTCATACCACAATCCCCGGTTCTTTTCTCTGGAACTGTTAGATTCAATCTTGATCCTTTTATGGAACACACTGATGCTGAGCTCTGGGAGGCTCTAGAAAGGGCGCATTTGAAAGATGTGATCAGCAGAAATTCCTTTGGCCTAGATTTTGAGGTTTCCGAGCAAGGAGAAAACTTCAGTGTTGGGCAGAGACAACTGTTAAGTCTAGCTAGAGCCTTGATACGAAAATCAAAGATTCTTGTTCTAGATGAGGCTACTGCAGCAGTTGATGTTAGAACTGATGCCCTTATACAGAAAACTATTCGCCAAGAATTTAAATCCTGCACAATGCTCGTTATTGCACACAGACTAAATACAATCATTGACTGCAATCGAATACTTGTGATTGATTCTGGGAAGGTTCTTGAATACAACACACCTCAGGAGCTCCTACTAGATGAAGGAAGTGCATTTTACAAGATGGTTCAGAGTACTGGACTTGCAAATGCTCAGTACTTACTTGGCCTAGCATTTGGATCAAATAATGAAAATTCTTGTGAATAA 2616 0.3998 MMENPVLSDINLEIPIGSLVAIVGGTGQGKTSLVSAMIGELPPIANANVIIRGTVAYVPQISWIFNATVCENILFGSEFDYERYQKAIDVTALQHDINLLPGRDFTEIGERGVNISGGQKQRVSLARAVYSNSDVYIFDDPLSALDSHVSQKVFKSCIKEGLQGKTRILVTNQLHFLPQVDHIILIREGMIEEQGTFEKLSKSGPLFQKLMENAGKMEEKLNHKNCRDMYDKTNFPPATDDAILETPNGTSHIKKGKSQKSMLIKEEERETGVVSWKVLTRYKSALGGLWAVLVLLTCYVMTEILRISSSTWLSVWTNKSTAAGYEKGYFILIYALLSFGQVVVTLVNSYWMIISSLRAAKRLHDAMLHNMLRAPMVFFHTNPVGRILNRFARDLGDIDRNIANFVSMFLAQFWQLLSTFVLIGTVSSLSLWAIMPLLTLFYGAYLYYQTTSREVKRLDSITRSPVYAQFAEALNGLASIRAYKAYDRIAQISGKFVDNNIRFTLVNISSNRWLTIRLETLGGLMIWLIATFAVMQNATAQNQAMFASTMGLLLTYALNITNILSRVLRQASSAENSLNAVERVDTYIELETEAPAIIEGNRPPPGWPSSGSIEFEDVVLQYRPELPPVLHGLSFRVSPTEKVGIVGRTGAGKSSMLNALFRIVELQKGRIIIDGCDISKFGVEDLRKVLTVIPQSPVLFSGTVRFNLDPFMEHTDAELWEALERAHLKDVISRNSFGLDFEVSEQGENFSVGQRQLLSLARALIRKSKILVLDEATAAVDVRTDALIQKTIRQEFKSCTMLVIAHRLNTIIDCNRILVIDSGKVLEYNTPQELLLDEGSAFYKMVQSTGLANAQYLLGLAFGSNNENSCE 871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g1412 871 ProSitePatterns ABC transporters family signature. 115 129 IPR017871 GO:0005524|GO:0016887
Alju04g1412 871 FunFam Multidrug resistance-associated protein member 4 597 849 - -
Alju04g1412 871 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 212 IPR027417 -
Alju04g1412 871 Pfam ABC transporter 630 778 IPR003439 GO:0005524
Alju04g1412 871 CDD ABCC_MRP_domain1 2 189 - -
Alju04g1412 871 FunFam ABC transporter C family member 2 1 229 - -
Alju04g1412 871 ProSitePatterns ABC transporters family signature. 750 764 IPR017871 GO:0005524|GO:0016887
Alju04g1412 871 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 613 847 IPR003439 GO:0005524
Alju04g1412 871 CDD ABC_6TM_ABCC_D2 292 588 IPR044726 GO:0140359
Alju04g1412 871 FunFam ABC transporter C family member 2 256 594 - -
Alju04g1412 871 Gene3D - 2 234 IPR027417 -
Alju04g1412 871 Pfam ABC transporter 7 142 IPR003439 GO:0005524
Alju04g1412 871 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 9 852 - -
Alju04g1412 871 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 603 847 IPR027417 -
Alju04g1412 871 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 293 576 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Alju04g1412 871 Gene3D - 597 849 IPR027417 -
Alju04g1412 871 Gene3D ABC transporter type 1, transmembrane domain 253 594 IPR036640 GO:0005524|GO:0016020
Alju04g1412 871 SUPERFAMILY ABC transporter transmembrane region 289 593 IPR036640 GO:0005524|GO:0016020
Alju04g1412 871 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1 213 IPR003439 GO:0005524
Alju04g1412 871 SMART AAA_5 16 196 IPR003593 GO:0016887
Alju04g1412 871 SMART AAA_5 639 818 IPR003593 GO:0016887
Alju04g1412 871 CDD ABCC_MRP_domain2 611 831 - -
Alju04g1412 871 Pfam ABC transporter transmembrane region 293 537 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g1412 Alju-ChrAlju04 28987928 28994859 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g1412 582 866 Calmodulin-binding Proteins AT2G36910 33.910 9.41e-39 154