Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g1382 ATGGCTTTCGCCTTCCCGCTCCTGCAGCTACATAGGCCTGTCCTCTGTTATGAACAAACAGATTTTATGATCATATACATGGATCGGCTAACACAATCCTTCTTGTTTTTAACAGCTGTTCTCCAATTCATATCAGGAGTAACTTCAACAGAGTTTACAGTGATTAACAAATGCAACTACACAGTATGGCCAGGCATTTCTTCAGCTGCTGGCAATACATTATCAACCACAGGTTTTGTTCTTAAAACAGGTGAGTCTAGGATAATCTCCGTGCCCACTTCTTGGAATGGCCGCTTTTGGGGTCGGACTCAATGCACACAAGACTCCACCGGAAGAAACTTCTCTTGTCTCACCGGCGACTGTGGCTCTGGGAAGCTTGAATGCCAAGGCATGGGAGGCACACCACCTGCGACATTAATAGAATTTTCTGTAGGACAAACCCAACGGCTTGATTTCTATGACGTGAGCTTGGTAGATGGATTCAATGTGCCTGTAGCGGTCGTTCCTCACGGCGGTTGTGGAGCCTGCAAGAGCACATATTGTCTGGCAGATATGATCAACCTATGCCCTTCAGAACTAAGGGTAATGAACAAAGATGGAAAAGTGGTGGCGTGCAAGGGCCCTTGTGAGGCAGATGGATCATCACAAACTTGTAGTAACAACTCTTCCGCGCCGCCGTCCCCTTATGCACAACTATTCAAGAGCGTTTGCCAACGTGCCTATAGCTATCCTTATGATGATCAACTAAGCACATTCACATGTCAAGGTGCAGATTACAATATCACCTTTTGTGAATCCCCCTACACAAATTTGGAGACATCTGCCTCCCCATCATGCACGGAAACCATCACATCATCTCACTACATCAAGGATCCAGATACAATAAGCTCCAAAGGGGGTTTGTTCACACTAGGGTTCTTCAGTCCTGGAAATTCTACAAATCGCTATGTGGGAATTTGGTACACGTCCAAGTCCACTATTGTATGGGTAGCTAACAGAAATCGACCACTAAGGGATACTTCAGGAACTGTTAGGATATCTGAAGATGGCAATCTTGTGGTATTAGATGGGCAAAACCAAACCATTTGGTCATCAAATGTATCAAATATTTCATCTACTACTAGTTGTCAGATTTTAGATTCTGGAAACCTTGTCCTAATCAACAACTCGATGAAAACTGTATGGCAAAGTTTTGAGCATCCTTCGGATTCATTGTTGCCAAGAATGAAAATTACCAGCAACAAAAGAACGGGGGAGAAACAGAAGTTAACAGCATGGAAAAATCAGTCTGATCCATCCCTTGGCAATTTCTCTCTGAGCCTAGAACAACTAAATTTTGCAGAATTGTTCATATGGAATGCAACTAGCCCCTTTTGGCGTAGTGGTCCATGGAATGACCAAGAAATTTCAACAGTACTCAAGATGAGTTCCGAGAATGATAATGGTGCTGAAGAGATGGTTGTTAGCTTATCAAATGGGCCAGACGTCAATGAAATAGTTGTTTTGAATTCAAAGGGAAAATTATTACACAAACAATGGGATGATACTAAGAGGCAATGGCAAGAAACCTACCTTGTTCAAAATTCAGATTGTGATGTTTATGGTATATGTGGGGAATTTGGAATATGCAATTCAAAGCGTGCACCAATCTGCAGTTGTTTGAGTGGGTTTGAACCAAGAAATAGGGAGGAATGGAATAGACAAAATTGGAAAGGTGGTTGTGTTAGGAAATCACCTCTGCAATGTGAGAAATTCAAAAATGGGAGTTCCAATGGAAAGGAAGATACATTTCTCCCTCTGCAAAATGTTAAGGCACCAGACTTAGGAGAACAATCATCTAATTCAGAAGATAAATGCAAAATCCAGTGCTTGGAGAACTGCACTTGTAAAGCATATTCATATGATTCAGTGCTTGGCTGTATGACTTGGAAAGAAAATCTTATTGACATACAACAGTTCTCAAATGGAGGAATTGACCTATATATCCGTGCAGCCTATTCAGACTTTGATAAGAAGAGGCATAGGACATTCATAATTATCATTATTGCAGTAATAGCAACCATCATCAGTGTCGCTTGTGCATGCTTCTTATGGAAATGGAAGGCAAAACATTCAGGAAAATGGAATAGCAAACAGTTCTTGTTAAAAAGCCATGGTGCAAATGTAGACAAAACAAGTGGCAATACTATTGGACAATTGTCAGAAGTTAAATTCGAGGAGTTAATGGTCTATAATTTTGAAAAAGTTGCAATGGCTACAAACAACTTTCAATTGACTAATAAACTTGGGCAAGGTGGTTTCGGTCCAGTCTACAAGGGAACACTACAAGATGGTCAAGATATAGCCGTTAAAAGACTATCAAGAGCATCTGGACAAGGACAAGAGGAATTTATGAATGAAATGGTTGTCATTTCCAGACTTCAACATCGTAATCTTGTAAAGCTTTTAGGTTGCTGTGTTGAAGGACAAGAAAAGATGTTGATCTATGAATACATGCCAAATAAAAGTTTGGATGCATTTATTTTTGATCCGTCGAAACGTAAACTTCTAGATTGGGAAAAGCGCTTTGTCATAATCGAAGGAGTAGCTAGAGGAGTACTTTATCTTCACAGGGACTCTAGAGTGAAAATTATACATAGAGACCTAAAGGTAAGTAATATCTTGCTAGATGAGAATCTGATTCCAAAAATATCAGATTTTGGTATGGCGAAAATTTTTAAAGGAAGTGAAGATCATGCTAACACAAGAAGAGTTGTTGGAACCTATGGCTATATGTCTCCCGAATATGCAATGGAAGGATTATTTTCAGAGAAATCAGATGTGTTTAGCTTTGGAGTTATACTATTAGAGATTATAAGTGGAAGAAAAGGCTCAAGCTTTTATAACAATGAGCACTCTCTAAGCCTTTTAGGATTTGCATGGAAATTATGGAATGAAGAAAACATAGTACAGCTAATAGATCCTGAAATATCAGATCAAAATCTGGAGAAGGATATATTGAGGTGCATACACATAGGACTTCTATGTGTACAAGACCTGGCGATTGAGAGGCCAAGTATGAGCACTGTAGTTTCTATGCTTAACAGTGAGATTGTTAATCTTCATCCTCCGAGGCAACCTGCATTCATCCAATGGCAGAGTATATTGAATCAATTGAACCCAGAAGAAACTCAGAGATTATTTTCCAACAACGAAGTTAGTATTAGTGACATACAGGGCAGATAG 3225 0.3984 MAFAFPLLQLHRPVLCYEQTDFMIIYMDRLTQSFLFLTAVLQFISGVTSTEFTVINKCNYTVWPGISSAAGNTLSTTGFVLKTGESRIISVPTSWNGRFWGRTQCTQDSTGRNFSCLTGDCGSGKLECQGMGGTPPATLIEFSVGQTQRLDFYDVSLVDGFNVPVAVVPHGGCGACKSTYCLADMINLCPSELRVMNKDGKVVACKGPCEADGSSQTCSNNSSAPPSPYAQLFKSVCQRAYSYPYDDQLSTFTCQGADYNITFCESPYTNLETSASPSCTETITSSHYIKDPDTISSKGGLFTLGFFSPGNSTNRYVGIWYTSKSTIVWVANRNRPLRDTSGTVRISEDGNLVVLDGQNQTIWSSNVSNISSTTSCQILDSGNLVLINNSMKTVWQSFEHPSDSLLPRMKITSNKRTGEKQKLTAWKNQSDPSLGNFSLSLEQLNFAELFIWNATSPFWRSGPWNDQEISTVLKMSSENDNGAEEMVVSLSNGPDVNEIVVLNSKGKLLHKQWDDTKRQWQETYLVQNSDCDVYGICGEFGICNSKRAPICSCLSGFEPRNREEWNRQNWKGGCVRKSPLQCEKFKNGSSNGKEDTFLPLQNVKAPDLGEQSSNSEDKCKIQCLENCTCKAYSYDSVLGCMTWKENLIDIQQFSNGGIDLYIRAAYSDFDKKRHRTFIIIIIAVIATIISVACACFLWKWKAKHSGKWNSKQFLLKSHGANVDKTSGNTIGQLSEVKFEELMVYNFEKVAMATNNFQLTNKLGQGGFGPVYKGTLQDGQDIAVKRLSRASGQGQEEFMNEMVVISRLQHRNLVKLLGCCVEGQEKMLIYEYMPNKSLDAFIFDPSKRKLLDWEKRFVIIEGVARGVLYLHRDSRVKIIHRDLKVSNILLDENLIPKISDFGMAKIFKGSEDHANTRRVVGTYGYMSPEYAMEGLFSEKSDVFSFGVILLEIISGRKGSSFYNNEHSLSLLGFAWKLWNEENIVQLIDPEISDQNLEKDILRCIHIGLLCVQDLAIERPSMSTVVSMLNSEIVNLHPPRQPAFIQWQSILNQLNPEETQRLFSNNEVSISDIQGR 1074
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g1382 1074 SMART blect_4 286 401 IPR001480 -
Alju04g1382 1074 ProSiteProfiles Protein kinase domain profile. 756 1049 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g1382 1074 ProSiteProfiles Thaumatin family profile. 49 264 IPR001938 -
Alju04g1382 1074 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 277 1019 - -
Alju04g1382 1074 SMART tha2 52 265 IPR001938 -
Alju04g1382 1074 SUPERFAMILY Protein kinase-like (PK-like) 741 1056 IPR011009 -
Alju04g1382 1074 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 275 398 - -
Alju04g1382 1074 SUPERFAMILY alpha-D-mannose-specific plant lectins 317 465 IPR036426 -
Alju04g1382 1074 Gene3D Phosphorylase Kinase; domain 1 718 831 - -
Alju04g1382 1074 FunFam THAUMATIN-LIKE PROTEIN 1 50 265 - -
Alju04g1382 1074 CDD TLP-PA 51 264 - -
Alju04g1382 1074 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 832 1035 - -
Alju04g1382 1074 CDD PAN_AP_plant 579 663 - -
Alju04g1382 1074 FunFam receptor-like serine/threonine-protein kinase SD1-8 729 831 - -
Alju04g1382 1074 CDD STKc_IRAK 762 1028 - -
Alju04g1382 1074 CDD B_lectin 286 401 IPR001480 -
Alju04g1382 1074 ProSiteProfiles PAN/Apple domain profile. 582 665 IPR003609 -
Alju04g1382 1074 Pfam D-mannose binding lectin 326 427 IPR001480 -
Alju04g1382 1074 ProSitePatterns Serine/Threonine protein kinases active-site signature. 877 889 IPR008271 GO:0004672|GO:0006468
Alju04g1382 1074 SMART ntp_6 592 664 IPR003609 -
Alju04g1382 1074 ProSiteProfiles Bulb-type lectin domain profile. 280 399 IPR001480 -
Alju04g1382 1074 Gene3D Thaumatin 50 264 IPR037176 -
Alju04g1382 1074 Pfam PAN-like domain 592 650 IPR003609 -
Alju04g1382 1074 PRINTS Pathogenesis-related protein signature 255 264 IPR001938 -
Alju04g1382 1074 PRINTS Pathogenesis-related protein signature 98 109 IPR001938 -
Alju04g1382 1074 PRINTS Pathogenesis-related protein signature 151 167 IPR001938 -
Alju04g1382 1074 PRINTS Pathogenesis-related protein signature 51 63 IPR001938 -
Alju04g1382 1074 PRINTS Pathogenesis-related protein signature 77 86 IPR001938 -
Alju04g1382 1074 Gene3D - 275 398 IPR036426 -
Alju04g1382 1074 SUPERFAMILY Osmotin, thaumatin-like protein 51 264 IPR037176 -
Alju04g1382 1074 Pfam Protein tyrosine and serine/threonine kinase 757 1025 IPR001245 GO:0004672|GO:0006468
Alju04g1382 1074 SMART serkin_6 756 1032 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g1382 1074 Pfam S-locus glycoprotein domain 459 560 IPR000858 GO:0048544
Alju04g1382 1074 Gene3D Transferase(Phosphotransferase) domain 1 832 1035 - -
Alju04g1382 1074 Pfam Thaumatin family 56 264 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g1382 Alju-ChrAlju04 28091860 28098382 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g1382 713 1074 Receptor kinase-like Gene Family AT4G23140 50.134 2.79e-119 380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Alju04g1382 PK_Tyr_Ser-Thr 2.8e-48 CL0016