Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g1331 ATGGAGGAAAACCCTAGTTCATCATCCAGAACTACTACTGACAGAAAATTCATAGAGAGGAATCGGAGATATCAAATGAAGGCTCTCTACTCCAAGCTCAAATCTCTTGTTCCTCATCAAACTCCAAGGGAGGCTATTCCATTACCTGATCAGCTAGAGGAAGCAACAAATTACATCAAGAAATTACAGATTAAGTTGGAGATAATGAAGGAGAAGAAGGACAACCTAATTGCAATTCATAATCAAAGGTCAAATTTTACCAAACATAGAAAAATGATTAAGAAATCATCAAAATCAGCACCATGGTTTGAGATCAGAGAAGTGGGTACTATAGCCTTACAAGTTGTTCTGAGGACTGAATTGGATAGTGAGTTTTCGTTCACTGATATCATTCGACTTCTTCATGAAGAAGAAGCAGATATTGTTAATGCCAATTACACTGTTGTTGAAGATGCAGTTATTCATACAATACACTGTGAGGTAGAGGAATCTGTCAACGTTGCTGCAACGATATCTGAGAAATTAAGGAGATTCTAG 537 0.3706 MEENPSSSSRTTTDRKFIERNRRYQMKALYSKLKSLVPHQTPREAIPLPDQLEEATNYIKKLQIKLEIMKEKKDNLIAIHNQRSNFTKHRKMIKKSSKSAPWFEIREVGTIALQVVLRTELDSEFSFTDIIRLLHEEEADIVNANYTVVEDAVIHTIHCEVEESVNVAATISEKLRRF 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g1331 178 Coils Coil 52 79 - -
Alju04g1331 178 Gene3D - 3 97 IPR036638 GO:0046983
Alju04g1331 178 Pfam Helix-loop-helix DNA-binding domain 17 63 IPR011598 GO:0046983
Alju04g1331 178 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 10 176 - -
Alju04g1331 178 FunFam Transcription factor bHLH162 1 88 - -
Alju04g1331 178 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 10 62 IPR011598 GO:0046983
Alju04g1331 178 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 11 77 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g1331 Alju-ChrAlju04 25046615 25048760 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g1331 1 178 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 41.935 2.76e-41 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Alju04g1331 HLH 1.9e-08 No_clan