Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g1326 ATGAGCACTCATTCTACAAGAAGTCAAGAACGAAGGGAGGCTATTGATCTTAATAGGGCTCCACCTGAAGTGATTCTGGAGCAGGAGACAACTCAATTTGTTCATCAACTTATTGATTTGGAGGCTTTTGATGATGATGTTATTTTAGCTACACAAAGTGATTTTCTTGAGGCTAAAAACAATTCAAGAAGGCATCGTGGGAGGACTACAGTTGATGTGGATTTATTAGATTATGTGAGACGGGCAGCTGAATTTCCTCCCAACAATTGCAGAACAGACTATTTAAACCAAACATTTCCTAATTCTGATCCACACATAGGATTTGAAGGCAGTGCTAGTTCTCAGGAGAAAGATAGAAAGTCAGCTGAACCTCCAAAGGAGCATGTCTTTACCTGTCCAATATGTATGGAACCACTTGTGGAAGAAGTGTCAACAAAGTGTGGTCATATATTCTGTAAGAGTTGTATCAAGGCTGCAATAAAAGCACAAGGAAAATGCCCTACATGTAGGGTCAAGGTCACTGCAAAAGGGCTTATAAGGGTGTTTCTGCCAACACCAACTTCTCCTTAG 570 0.4053 MSTHSTRSQERREAIDLNRAPPEVILEQETTQFVHQLIDLEAFDDDVILATQSDFLEAKNNSRRHRGRTTVDVDLLDYVRRAAEFPPNNCRTDYLNQTFPNSDPHIGFEGSASSQEKDRKSAEPPKEHVFTCPICMEPLVEEVSTKCGHIFCKSCIKAAIKAQGKCPTCRVKVTAKGLIRVFLPTPTSP 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g1326 189 MobiDBLite consensus disorder prediction 1 20 - -
Alju04g1326 189 SUPERFAMILY RING/U-box 127 182 - -
Alju04g1326 189 MobiDBLite consensus disorder prediction 105 124 - -
Alju04g1326 189 ProSitePatterns Zinc finger RING-type signature. 147 156 IPR017907 -
Alju04g1326 189 SMART ring_2 132 169 IPR001841 -
Alju04g1326 189 MobiDBLite consensus disorder prediction 1 18 - -
Alju04g1326 189 ProSiteProfiles Zinc finger RING-type profile. 132 170 IPR001841 -
Alju04g1326 189 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 107 184 IPR013083 -
Alju04g1326 189 PANTHER ELFLESS, ISOFORM B 7 185 - -
Alju04g1326 189 Pfam Ring finger domain 131 170 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g1326 Alju-ChrAlju04 24931063 24935443 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g1326 7 185 C3H Transcription Factor Family AT5G48655 45.320 1.83e-37 127