Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g1304 ATGGAAACTGAGGGAAAGAGGAGCTCGACGCACAAGAAAGAGGAAGACGAAGATGAAGAGGAAGAAGTAGAAGAAGATGACGGCGATGAAGAAGAGACAGAGAGTGAAGTTGGCTCTGGAGAAGAACATGGCAGAAAGAGAAGGGTCATATCAAATACAAACAACAGGAGAGGCCCCAAACACGGAAGCTCCTCGGCGGCGCCACCGTGTTGTCAGGCCGATAATTGCCGGACTGATCTGAGCGGCGCCAAACAGTATCACCGGCGGCACAAGGTCTGTGAGTACCATGCTAAAGCACCGGTCGTACTCATTTCAGGGAATGAACAACGATTTTGCCAGCAATGTAGCAGGTTTCATGAGCTTTCAGAGTTTGACAACTCAAAACGGAGTTGTAGAAGACGTTTGGCAGGGCATAATGAGAGAAGGCGAAAGGTTCCTTCTGATTATCATGGAGAAGGTTATCATTAA 468 0.4829 METEGKRSSTHKKEEDEDEEEEVEEDDGDEEETESEVGSGEEHGRKRRVISNTNNRRGPKHGSSSAAPPCCQADNCRTDLSGAKQYHRRHKVCEYHAKAPVVLISGNEQRFCQQCSRFHELSEFDNSKRSCRRRLAGHNERRRKVPSDYHGEGYH 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g1304 155 ProSiteProfiles Zinc finger SBP-type profile. 68 145 IPR004333 GO:0003677
Alju04g1304 155 Pfam SBP domain 71 144 IPR004333 GO:0003677
Alju04g1304 155 MobiDBLite consensus disorder prediction 1 74 - -
Alju04g1304 155 MobiDBLite consensus disorder prediction 136 155 - -
Alju04g1304 155 SUPERFAMILY SBT domain 68 149 IPR036893 GO:0003677|GO:0005634
Alju04g1304 155 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 27 146 IPR044817 GO:0003677
Alju04g1304 155 MobiDBLite consensus disorder prediction 141 155 - -
Alju04g1304 155 MobiDBLite consensus disorder prediction 15 37 - -
Alju04g1304 155 Gene3D - 62 132 IPR036893 GO:0003677|GO:0005634
Alju04g1304 155 FunFam Squamosa promoter-binding-like protein 14 62 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g1304 Alju-ChrAlju04 23967858 23970401 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g1304 62 148 SBP-box Gene Family AT2G33810 67.816 3.06e-40 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Alju04g1304 SBP 3.1e-33 No_clan