Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g1296 ATGTGTAGATTCTCTCCACTTGTGCGTGCAAGTGGAGAGACGCTTTCCCACTTGCCATTCAAAATACATGCAATAATAAAAATTACTCTCCATCGTCGTCTTCTTCTCAACAATCATTCACAGAAACTCTTCATCCTCACCATTACCTCCATGGTTATGGCTTCCCACAGAGCTTTCTTCTTACTCTTCTTCTTTCTTCTTCGCTTCCTCTTTTCTGAATCACAGACCACTTTGCTCTATAACGCTTGCTCTTCCACCAAAACCTTCACTGCAAATAGTTCCTTTCAATCCGACCTCACCACCCTCCTCTCTTCCTTATCTTCCGCCAACACCGACTTTTACAACACCACCGTGGCCGCTGGCGGCGGCGGCGAAGACACCACATACGGCCTCTTCATGTGCCGGGGTGATGTCACCATCCAGGTTTGCCGCCAATGCGTGGGTACAGCAGTCCAACGATTACCTTCCATGTGTGGATTTTCCAAGGAGGCCATAATCTGGTACGACGAGTGCTTGCTTCGCTACTCGAATCGGTCCTTCTTCTCCACTGTCGACACAAGCCCCCAAACCGGCTTTCCCCTCTGGAACACCGGCAATGTTTCCGGCCAAGCAAACTTCAAGAGTATAATGTTCACCACCTTGAACAAGACCGCGGATGAGGCGGCGGCGAAACCTGGTTTGGGAGAGAAAATGAAGAAGTATGCCACGAAAGAAGCTAATATTTCGGGGTCTCATCAAACTCTGTATTGTTTGGCTCAGTGCACGCCGGACCTTTCGCCGGGAGATTGTAGAAAGTGTCTGGGTGGTGCAATTGGCGGGCTTTCATCTTGTTGTGAGGGTATGGCCGGAGGAAGAGTTCTGTATCCGAGTTGTAACGTTCGTTATGAAGTGTTTCGTTTCTATCGTTCTGATGATCAACTCGTAGGGACGCCGACGCCGACTTTACCTTCTCCTCCGACAATGTCTTCAGATCCCCGAGGGAAAGGGAAAGGCAAATCAACACCAATTATTGTGATAGTTGTGGTTTGTCTTGTTGGTACGGCAATAATTTTTTGTTTCGCCTACTATCTCTTAAAGAATCACATGATGAAGAGTCGAAGGGCTGTTCTTAGACAAAAATACTTTGGAAGTGAAGGCAACAGTTTAGAGCCGCTGGAATTCAATTTGGCTACTATTGAATCTGCGACAAATAAATTTTCAGAGGAAAATAGATTAGGGAAAGGTGGCTTTGGACAAGTTTACAAGGGTATTCTTTCAAGCGGCCAAAATATAGCTGTGAAGAGACTTGCAAACGGTTCTGGCCAAGGTGGAGAAGAATTTAAGAATGAAGTTTTATTAATAGCAAGACTCCAGCACAGAAATTTGGTGACACTATTAGGATTCTGTATAGAAGAGCAAGAAAAAATACTTATATATGAATATGTCCCCAACGGAAGCCTTGACTACTTCCTATTTGGTTCCAATAGAAGGAAAGTACTAAATTGGTTGGAACGCTGTAACATCATAGGAGGAGTTGCTCGTGGAATTTTTTATCTTCATGAACACTCTCGCCTTAAAATTATACATCGTGATCTCAAACCTAGTAATATTTTGTTAGATGATGAAATGAATCCAAAAATTTCAGATTTTGGATTAGCTAAGATGGTTGCCATTAGTGAAAATGAGGGAAATACAAAAAGAATTGCTGGAACATATGGCTATATGTCTCCAGAATATGCAATGTTCGGACAATATTCTGAAAAATCAGACGTATTCAGTTTCGGAGTTATAGTTTTAGAAATTATCAATGGAAGGAAGAATACAAATTATCACGAACAATCAAAAGATGCTTATAGTCTCATAAGCTATGTTTGGAATCAATGGAGGGATGAAAAGTTGTTAGAGGTATTGGATTCAAACCTGAAAGAATTTGGATCATATAATGAACTGAGAAAATGCATCCAGATTGGTTTATTATGTGTTCAAAAGAATCCAGACTTAAGGCCTTCCATGGCCGAAGTTGTTCATTATCTTACTAATGAATCTATTCAATTGCCATTTCCACAAGAACCTGCTTTCCTTCTACATGGCCCAATGGAGCCATCCACTAGCGGGTCTGGAAGTAATGAATCATGTTCTATAAATGAAATGTCCATGAGTAAATTTCTTCCTCGTTAG 2157 0.4214 MCRFSPLVRASGETLSHLPFKIHAIIKITLHRRLLLNNHSQKLFILTITSMVMASHRAFFLLFFFLLRFLFSESQTTLLYNACSSTKTFTANSSFQSDLTTLLSSLSSANTDFYNTTVAAGGGGEDTTYGLFMCRGDVTIQVCRQCVGTAVQRLPSMCGFSKEAIIWYDECLLRYSNRSFFSTVDTSPQTGFPLWNTGNVSGQANFKSIMFTTLNKTADEAAAKPGLGEKMKKYATKEANISGSHQTLYCLAQCTPDLSPGDCRKCLGGAIGGLSSCCEGMAGGRVLYPSCNVRYEVFRFYRSDDQLVGTPTPTLPSPPTMSSDPRGKGKGKSTPIIVIVVVCLVGTAIIFCFAYYLLKNHMMKSRRAVLRQKYFGSEGNSLEPLEFNLATIESATNKFSEENRLGKGGFGQVYKGILSSGQNIAVKRLANGSGQGGEEFKNEVLLIARLQHRNLVTLLGFCIEEQEKILIYEYVPNGSLDYFLFGSNRRKVLNWLERCNIIGGVARGIFYLHEHSRLKIIHRDLKPSNILLDDEMNPKISDFGLAKMVAISENEGNTKRIAGTYGYMSPEYAMFGQYSEKSDVFSFGVIVLEIINGRKNTNYHEQSKDAYSLISYVWNQWRDEKLLEVLDSNLKEFGSYNELRKCIQIGLLCVQKNPDLRPSMAEVVHYLTNESIQLPFPQEPAFLLHGPMEPSTSGSGSNESCSINEMSMSKFLPR 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g1296 718 ProSitePatterns Serine/Threonine protein kinases active-site signature. 520 532 IPR008271 GO:0004672|GO:0006468
Alju04g1296 718 ProSiteProfiles Protein kinase domain profile. 399 676 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g1296 718 FunFam cysteine-rich receptor-like protein kinase 10 475 678 - -
Alju04g1296 718 ProSitePatterns Protein kinases ATP-binding region signature. 405 427 IPR017441 GO:0005524
Alju04g1296 718 Gene3D Phosphorylase Kinase; domain 1 361 474 - -
Alju04g1296 718 SMART serkin_6 399 671 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g1296 718 Gene3D Transferase(Phosphotransferase) domain 1 475 678 - -
Alju04g1296 718 Gene3D - 190 300 IPR038408 -
Alju04g1296 718 Gene3D - 75 180 IPR038408 -
Alju04g1296 718 CDD STKc_IRAK 405 673 - -
Alju04g1296 718 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 77 714 - -
Alju04g1296 718 Pfam Protein kinase domain 400 669 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g1296 718 ProSiteProfiles Gnk2-homologous domain profile. 77 180 IPR002902 -
Alju04g1296 718 Pfam Salt stress response/antifungal 83 177 IPR002902 -
Alju04g1296 718 Pfam Salt stress response/antifungal 202 296 IPR002902 -
Alju04g1296 718 SUPERFAMILY Protein kinase-like (PK-like) 383 698 IPR011009 -
Alju04g1296 718 PIRSF SRK 275 718 IPR024171 GO:0004674
Alju04g1296 718 PIRSF SRK 50 133 IPR024171 GO:0004674
Alju04g1296 718 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 76 180 - -
Alju04g1296 718 ProSiteProfiles Gnk2-homologous domain profile. 188 300 IPR002902 -
Alju04g1296 718 FunFam Cysteine-rich receptor-like protein kinase 25 190 300 - -
Alju04g1296 718 FunFam Cysteine-rich receptor-like protein kinase 10 362 474 - -
Alju04g1296 718 MobiDBLite consensus disorder prediction 309 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g1296 Alju-ChrAlju04 23821429 23824824 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g1296 48 718 Receptor kinase-like Gene Family AT4G05200 42.836 0.0 555
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Alju04g1296 Pkinase 4.8e-49 CL0016