Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g1295 ATGGTGGCGCCGACGCCTGCACCGGCGGCTGCGCTCTCTCCTCCGGCAAATTCTTCAGATCCCCAAGTAAAAAAGAAAGGCCAATCATCTCCAACAACTGTTGTGATAGTTGTGGTTTCTATTATCGGTTCGGGGTTACTTCTTGGTTTTGCTTACTATCTCCTAAGGAGGAAAATGAAGAAGAGACGCAGAGATGTTCTTAGACAAGAATACTTTGGAAGTGAAGGCACCAACTTAGAGCCTTTACAGTTCAGTTTGGCTACTATTGAAACTGCTACAAATCAATTTTCAAATGAAAACAGTTTAGGCAAAGGTGGATTTGGACAAGTTTATAAGGGTATTCTCTCAAATGGCCAAGAAATAGCTGTGAAAAGACTCTCAAAAGTTTCTGGCCAAGGTGCAGAAGAATTCAAGAACGAGGTTTTATTGATAGCCAAACTCCAGCACAGAAATTTGGTGGCGTTATTAGGATTCTGCATAGATGAGAAAGAGAAAATACTTATTTATGAATATGTTCCCAACAGAAGCCTGGATTACTTTCTATTTGGTTCCCAAAATAGCAAAGGACTAACTTGGTTGGAGCGTAGTAAAATCATCAAAGGAGTTGCTCGAGGAATTCTTTATCTTCATGATTATTCTCGCCTCAAAATCATACATCGTGATCTCAAACCTAGCAATATTTTGTTAGATGATGAAATGAATCCAAAGATTTCAGACTTTGGCTTGGCTAAGATGGTTGCTATCAATGAAAATGAGGGAAATACAAATAGAGTTGTTGGAACATATGGCTATATGTCTCCAGAATATGCAATGTTTGGACAATATTCTGAAAAGTTGGATGTTTTCAGTTTTGGAGTTATAATTTTAGAAATTATAAGTGGAAGGAAGAACGCAAGCCGCCATAATCAATCACAATATGCTGATAGCCTCTTAAGCTATGCATGGAACCAATGGAAGGATGAAAAGTTCTTAGAGATATTGGATTCAAATCTTAAAGAATTGGGATCATTTAATGAAATGATTAAGTGCATCCAGATTGGTTTGTTATGTGTTCAAGAGAATCCAGAAGCTAGGCCTTCCATGGCAGCAATTATTTCATATGTAAGCGATGATTCAATTCAATTACCAATTCCACAAGAGCCTGCCTTCTTTCTGCATGGTCGAATGGATCCTAATAACAATATTGAATCTCAAAGTGGAGAGTCATGCTCTACTAATGAAGTATCTAAGAGTGAATTCTTTCCTCTCTAG 1251 0.3797 MVAPTPAPAAALSPPANSSDPQVKKKGQSSPTTVVIVVVSIIGSGLLLGFAYYLLRRKMKKRRRDVLRQEYFGSEGTNLEPLQFSLATIETATNQFSNENSLGKGGFGQVYKGILSNGQEIAVKRLSKVSGQGAEEFKNEVLLIAKLQHRNLVALLGFCIDEKEKILIYEYVPNRSLDYFLFGSQNSKGLTWLERSKIIKGVARGILYLHDYSRLKIIHRDLKPSNILLDDEMNPKISDFGLAKMVAINENEGNTNRVVGTYGYMSPEYAMFGQYSEKLDVFSFGVIILEIISGRKNASRHNQSQYADSLLSYAWNQWKDEKFLEILDSNLKELGSFNEMIKCIQIGLLCVQENPEARPSMAAIISYVSDDSIQLPIPQEPAFFLHGRMDPNNNIESQSGESCSTNEVSKSEFFPL 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g1295 416 ProSitePatterns Serine/Threonine protein kinases active-site signature. 217 229 IPR008271 GO:0004672|GO:0006468
Alju04g1295 416 Pfam Protein kinase domain 97 365 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g1295 416 SUPERFAMILY Protein kinase-like (PK-like) 79 388 IPR011009 -
Alju04g1295 416 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 15 411 - -
Alju04g1295 416 Gene3D Phosphorylase Kinase; domain 1 57 171 - -
Alju04g1295 416 CDD STKc_IRAK 102 361 - -
Alju04g1295 416 FunFam cysteine-rich receptor-like protein kinase 10 172 375 - -
Alju04g1295 416 ProSitePatterns Protein kinases ATP-binding region signature. 102 124 IPR017441 GO:0005524
Alju04g1295 416 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 56 171 - -
Alju04g1295 416 Gene3D Transferase(Phosphotransferase) domain 1 172 374 - -
Alju04g1295 416 MobiDBLite consensus disorder prediction 1 27 - -
Alju04g1295 416 SMART serkin_6 96 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g1295 416 ProSiteProfiles Protein kinase domain profile. 96 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g1295 Alju-ChrAlju04 23811604 23818376 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g1295 26 388 Receptor kinase-like Gene Family AT4G23190 52.603 9.51e-134 394
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Alju04g1295 Pkinase 3.1e-50 CL0016