Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g1291 ATGAGGTCTGTGAGGCCAGAATGGAACTTGATATCAGTTTCACCTGCAGTAGGAAACCTTGAAGTGACATCACCATCTTCTTTGCCTCTTATGGAAGGGAATGCAGCCATGTCTAAAGTTTCTTTTCCTTCATACAATGAACCTACAATTAGAAAGAAGGATTTTCAACTGAAACGTAAATGTTCAAGTAGTCCAGAATCAAGAAAAAATAAAGGATTAGAAACTGATGTTGAAAATGCTGGATCCTTTTTACAGAGGAAAACCTTTGGAGGATATAATGAACCAAGTTGCAATTACACTTCATATTTATGTGGCGTTAATAAGGATGTATGGTCTGGGCCTTCTAGGTCATTTACAGATTTTGGAAAAGATGGAACTATTGACCTGCAGAGAGATTGCTTTGTTGAGAAGGCTAGTGGTGATCAAAATCATATAAAGCATATTAGGCAGTTGAACATGCAATCAGGAGATGCTATGAGCCCAACAACATCAAGGCATCCTTCTCCTGTCTTGAGGACCAGAGAGCTGCCTCCCCGTGATGAGATTAAAGTTGGAAACAAGCATCGTGGAAATTTATGTGCTTTTTATGCCAAAGGATGGTGCATCAAGGGTAATTCTTGTAGTTTTGTTCATATAAAAGATCCTGAAATTAAATCTGGCCAGCAGACTGAAGGAGAATTGGTTAATCAAAATTGGAAGAGAGAAGTGCAACAAGAGGAAGGTATTGGAGATGATGTTAAGAGATCAAGAATGCCTGGTGCTCAAGTTCCATGGGCTGCTACGCAAGAAAGAACATCTCTGCATTCATCTGAATTTCCCTTAAACCCAATAATCCGGAAAGAAGTAGGCCCAACCTGGCATCCAAATAAAAGCTGGTCTGTCTCTTCTTTCCCTTCTGGTCTAACCCATACAGAGGGAATGACTACCACTCAAGCTGAGAGTCGTTCACCTAATTTAAACATGGCCACTCACCTTCCAACTACATGCATGCCACTGTCCCACCATACCCCTTCCCGATTGGGATGTTCATTGTCTTCTAGTGGATCTTTAAGGGAAAGTTCTATAGATTCTCAACAACTTTTGAGCAGTAGCATGGCATATCGTGACAGCAGATCCTCTTTCTCTGATCCTGAAAGGGAAGGTTTGGCTCTAAGTTGTTCGTTTGGGGTTCCACCACACCCAACTGGCTGTAAATTAAAATTCTCTTCATATGATTGGGAGCCATCTGTACCTTTCAAACCATCTTTTTTTATTACTTCATCGAGTGGATCATCTGTTGAAGATCATAAAGACCCTTTTCATTGTAGTGTAGAGATACCCAGTATAGGGGATGGATCCTTGAAAGCTTTCATTTTGTCTCATAGGTCATCCATTCAGATTTCATCTCAGGTTCCTACAAATGCTGAGTTTGTTGAAGCTGCAAATCAGGGATCAGATCTTCATGGTGCCAGAAGTTCTGTATCTTCTCATAATAGATGTAATAAAACTGAGCTTGAGAAGAGTTGTGTTCCCCATGAAAAAGGTTTTGTTACAACTGAAACAGATAGAACAGCAGCAAGATATCTAAATTGCAATGTTGGAAGGGTCGTCATGGGACTCAATACCTTTGAAGGTGTTAAAAATATAGGAAAAGAACTAACTGAGGGTGTTGCTAGACCGCAAGTTGAAGTAACAGAGTACAAAAAACAAAGAGTAGACAGGGATAAGAAAAACAGTGAGATGGATAATAATCTTCAGAAGGATGTTGGGATGCAGATAGAATCAATGGAACTGAGAAATTTCCGTTTTGCACTTGTTGATCATGTGAAAGAGATTTTAAGACCAGTTTGGCATGAGGGTCACCTCAGCAAGGATGTGCATAACATGATTGTTAAAAAATCAGTTGACAAGATTATTAGCACCTTACAGCCTCAGCAAATTCCACCAAACGAGGAATCTATCAAGAAGTACCTTTCTTTTTGTCATGTGAAAATTGCAAATCTGGTCAAGGAATATACCAGTATACATGGTGAGGTTCGATGA 2022 0.3981 MRSVRPEWNLISVSPAVGNLEVTSPSSLPLMEGNAAMSKVSFPSYNEPTIRKKDFQLKRKCSSSPESRKNKGLETDVENAGSFLQRKTFGGYNEPSCNYTSYLCGVNKDVWSGPSRSFTDFGKDGTIDLQRDCFVEKASGDQNHIKHIRQLNMQSGDAMSPTTSRHPSPVLRTRELPPRDEIKVGNKHRGNLCAFYAKGWCIKGNSCSFVHIKDPEIKSGQQTEGELVNQNWKREVQQEEGIGDDVKRSRMPGAQVPWAATQERTSLHSSEFPLNPIIRKEVGPTWHPNKSWSVSSFPSGLTHTEGMTTTQAESRSPNLNMATHLPTTCMPLSHHTPSRLGCSLSSSGSLRESSIDSQQLLSSSMAYRDSRSSFSDPEREGLALSCSFGVPPHPTGCKLKFSSYDWEPSVPFKPSFFITSSSGSSVEDHKDPFHCSVEIPSIGDGSLKAFILSHRSSIQISSQVPTNAEFVEAANQGSDLHGARSSVSSHNRCNKTELEKSCVPHEKGFVTTETDRTAARYLNCNVGRVVMGLNTFEGVKNIGKELTEGVARPQVEVTEYKKQRVDRDKKNSEMDNNLQKDVGMQIESMELRNFRFALVDHVKEILRPVWHEGHLSKDVHNMIVKKSVDKIISTLQPQQIPPNEESIKKYLSFCHVKIANLVKEYTSIHGEVR 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g1291 673 SUPERFAMILY CCCH zinc finger 188 211 IPR036855 GO:0046872
Alju04g1291 673 ProSiteProfiles Zinc finger C3H1-type profile. 192 214 IPR000571 GO:0046872
Alju04g1291 673 PANTHER PROTEIN FRIGIDA-ESSENTIAL 1 162 666 - -
Alju04g1291 673 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 192 211 IPR000571 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g1291 Alju-ChrAlju04 23775173 23777482 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Alju04g1291 None None None