Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g1278 ATGGGAAAAACTTCTTGCCTTGTTTTCCTGCTCTTACTTCATTGTTTCTTGGGCTCCTTAGCTTGGTCTGATACAAACATCAGTACTGATAAATCTGCACTTCTTGCCCTTAAATCTTCTATCACTTCAGATCCATATGATTTCTTAGCTAACTGGTCTGTCTCTTCTTCTCCATGCAATTGGAGTGGTGTCAGATGTGATACTCATCATAGAAGGGTTCACTTCTTGAATCTTGGTGGCATGAAACTCAAGGGCTCCATACCTCCACAGCTAGGAAATCTCTCAATCCTTGTTGAACTTGATCTCAGTGACAACAATTTTTATGGCCAAATACCAGGAGATTTAGTTCGATTGCGTAATTTGAAACTATTCAACTTGAGCTACAATGACTTTCATGATGAGCAAGTTCCAACATGGATTGGAAATTTATCTTCACTTGTGCAGCTAAGTCTTCAAAATAACAATCTTAATGGATTTATTCCATTATCTCTATTCAATTTGTCATCATTAGAGATCTTAGATTGTAATGATAATTTCATTGAAGGGATAATTCCACTAGAGGTGGGCAGACTTGAGCAATTAAAGATTTTACGCCTTGCGGTGCTGCAAGAGATTGAGCTTGGAATAAATCAATTATCTGGTGAAATTCCATCATCTCTGTTCAGCATTTCTACTTTAAGATATGTAGATCTGAATCAAAACAATTTGAATGGTCGTCTTCCAGTATCAATCGACAATGGAACGAAGTTGGAAGAATTATATCTGCCATACAACTCCTTTATTGGTGAAATTCCTTCATTTATTTGGAACATGCCTTCTTTGAGAAGAGTCGACTTTGGCATCAATCATTTAAAGGGAAATTTGCCAGATGATATGTGCCATCAACTCCCTTTACTTGAAGCCTTGGGAGTTAATACTAATCAATTAGAGGGAAGCATTCCACAATCAATAACTAACTGCACTTCTTTGAAAGAAATATATTTGGGTGGTAACTCATTTACAGGTTTTATACCCAAGGATATAGGGAATCTCGTTAAACTTGAAATCTTAGATTTGGGAGGAAACAACTTGAGTGGACCTATTCCTCCCAATATATTCAACATTTCAACATTGACATATTTGCGCCTTGGTGGTAATTTCCTCTCTGGGCTTCTCCCATCATATTTAGGAATTAACCTTCCAAACTTGAAGACATTATGGCTGGATGAGAATGAACTAACTGGACCAGTTCCAAACAGCTTATCAAATGCATCTAAGCTCATTACCTTAGGCTTGTCATTGAATAAATTTAACGGAGCTATACCCAATGTACTCGGAAATTTGACAAACATGATGGATTTAGCTCTGGATGATAATGATTTGACTGGGTTCATTCCAAATACAGTTAACAAATTACATAGCCTTCAACGTTTAAGTCTCACCAACAACAAATTGCAAGGGTCCATTATAAATGAGCTTTGCCAACTCAAAAGTCTAAGTGAGTTGTATCTTGCCAACAACACGTTTTCGGGAATAATACCGGGATGCCTCGGAAATATTTCTTTACGGAAGTTGGATTTCAGCTCTAATAAGTTGATTTCTCATATACCCTATTCACTTTGGAGTCTCAAAGATATTTTGTATCTAGACATATCCTCCAATGCACTTAGTGGAATGATTTCACCAAAGGTATCAAACTTGAGAGCAATTACACTATTGAACTTGTCAAGAAATCAAATTTCAGGAAGCATCCCTACAACCATGGGTGACCTGCAAACTTTGCTCACTCTGTCTTTAGCACAAAACAAATTACAAGGGCCTATTCCTGCATCACTTAGCAGCATGATAAGCGTGGAGTCCATGGATCTCTCCCATAATTATTTGTCTGGTATGATTCCAAAGTCCTTTGAGTCATTACTCCATCTTAAATACATTAATCTTTCCTACAATTTCTTGTATGGAGAAATTCCAAATGGTGGCCCTTTTCCAAATTTTACCGCAGAATCTTTTATGATGAATAAAGATCTGTGTGGGAAATCCCAACTACAAGTCCAACCATGTAGGGAAGGAAACAAGCCCATATCAAATAAAGTGATGATGATTATAAAATTCTTATTGCCCATCACGGTTGTCATTTTGATTGTCTTAGGCATTGTCTTTCTAAAGCGTAAGAGACATGATGATAATTATTCAACCACGAGCAATTTAGTCAATTTGGATAGACCAACCAGGATATCCTATTATGAGCTTCTGCAGGGAACAAATGGATTTGATGAGAGTAATCTTCTTGGCTCTGGAAGTTTTGGATCAGTATACAAAGCAACTCTTTCAAATGAAGAGATAGTTGCTGTTAAAGTATTTAACTTGGACATGGAAGAAGCATTAAGAAGTTTTGATATTGAATGTGCTGCCATGCGCAATTTACGCCATCGCAATCTCATTAAGATCATTAGTAGTTGCTCAAATGATCATTTCAAATCTCTAATAATGGAATTCATGGATAATGGGAGCCTTGACAGATGGTTGTACTCTCATAACTATTATTTAGATGTCTTGCAAAGGTTGAATATAATGATTGATGTGGCAATAGCTTTGGAGTATCTTCATCATGGTTCTCCTACACTAGTTGTTCATTGTGATGTAAAACCGAGCAATGTTTTGTTGGACAAAGATATGGTGGCTCATCTTAGTGATTTTGGTATTTCTAAATTGTTTAGTGAAAGACAACTGGAAATCTATACCAAAACTTTGGCTACAATTGGCTATATGGCACCAGAGTATGGATCGAATGGAGTTGTTTCCGCCAAAGGAGATGTTTTTAGTTATGGGATTTTGCTTATGGAAATGTTTACGAGGAAGAAGCCAACAGATGAGATGTTTGTTCAAGGATTAATATTGAAAGATTGGGTGAGCAAATCAACACCACATTCAATCATTAACATTATAGATACCAATTTGCTGCACCGTGAAATTCAAAATGCTGATATTATATTACCTCATATATCATCCATTTTTGAGTTAGCATTAAATTGTTGCATTGACTTACCAGAGGCACGATGTACTATGATTGATGTTGTAGTATCGTTGAAAAACATCAAGGCTTTGTTTATGGAACATGCTACAAACACAGCTAGTTGA 3117 0.3651 MGKTSCLVFLLLLHCFLGSLAWSDTNISTDKSALLALKSSITSDPYDFLANWSVSSSPCNWSGVRCDTHHRRVHFLNLGGMKLKGSIPPQLGNLSILVELDLSDNNFYGQIPGDLVRLRNLKLFNLSYNDFHDEQVPTWIGNLSSLVQLSLQNNNLNGFIPLSLFNLSSLEILDCNDNFIEGIIPLEVGRLEQLKILRLAVLQEIELGINQLSGEIPSSLFSISTLRYVDLNQNNLNGRLPVSIDNGTKLEELYLPYNSFIGEIPSFIWNMPSLRRVDFGINHLKGNLPDDMCHQLPLLEALGVNTNQLEGSIPQSITNCTSLKEIYLGGNSFTGFIPKDIGNLVKLEILDLGGNNLSGPIPPNIFNISTLTYLRLGGNFLSGLLPSYLGINLPNLKTLWLDENELTGPVPNSLSNASKLITLGLSLNKFNGAIPNVLGNLTNMMDLALDDNDLTGFIPNTVNKLHSLQRLSLTNNKLQGSIINELCQLKSLSELYLANNTFSGIIPGCLGNISLRKLDFSSNKLISHIPYSLWSLKDILYLDISSNALSGMISPKVSNLRAITLLNLSRNQISGSIPTTMGDLQTLLTLSLAQNKLQGPIPASLSSMISVESMDLSHNYLSGMIPKSFESLLHLKYINLSYNFLYGEIPNGGPFPNFTAESFMMNKDLCGKSQLQVQPCREGNKPISNKVMMIIKFLLPITVVILIVLGIVFLKRKRHDDNYSTTSNLVNLDRPTRISYYELLQGTNGFDESNLLGSGSFGSVYKATLSNEEIVAVKVFNLDMEEALRSFDIECAAMRNLRHRNLIKIISSCSNDHFKSLIMEFMDNGSLDRWLYSHNYYLDVLQRLNIMIDVAIALEYLHHGSPTLVVHCDVKPSNVLLDKDMVAHLSDFGISKLFSERQLEIYTKTLATIGYMAPEYGSNGVVSAKGDVFSYGILLMEMFTRKKPTDEMFVQGLILKDWVSKSTPHSIINIIDTNLLHREIQNADIILPHISSIFELALNCCIDLPEARCTMIDVVVSLKNIKALFMEHATNTAS 1038
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g1278 1038 Gene3D Phosphorylase Kinase; domain 1 732 825 - -
Alju04g1278 1038 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 289 385 - -
Alju04g1278 1038 Pfam Leucine rich repeat N-terminal domain 29 67 IPR013210 -
Alju04g1278 1038 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 826 1035 - -
Alju04g1278 1038 SUPERFAMILY Protein kinase-like (PK-like) 723 1022 IPR011009 -
Alju04g1278 1038 SUPERFAMILY RNI-like 202 506 - -
Alju04g1278 1038 SMART LRR_typ_2 393 416 IPR003591 -
Alju04g1278 1038 SMART LRR_typ_2 608 631 IPR003591 -
Alju04g1278 1038 SMART LRR_typ_2 344 368 IPR003591 -
Alju04g1278 1038 SMART LRR_typ_2 513 536 IPR003591 -
Alju04g1278 1038 SMART LRR_typ_2 94 118 IPR003591 -
Alju04g1278 1038 SMART LRR_typ_2 296 320 IPR003591 -
Alju04g1278 1038 SMART LRR_typ_2 143 167 IPR003591 -
Alju04g1278 1038 SMART LRR_typ_2 489 512 IPR003591 -
Alju04g1278 1038 SMART LRR_typ_2 199 223 IPR003591 -
Alju04g1278 1038 SMART LRR_typ_2 560 584 IPR003591 -
Alju04g1278 1038 SMART LRR_typ_2 271 295 IPR003591 -
Alju04g1278 1038 ProSitePatterns Serine/Threonine protein kinases active-site signature. 869 881 IPR008271 GO:0004672|GO:0006468
Alju04g1278 1038 FunFam Nuclear pore complex protein NUP107 27 186 - -
Alju04g1278 1038 ProSitePatterns Protein kinases ATP-binding region signature. 756 778 IPR017441 GO:0005524
Alju04g1278 1038 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 390 684 - -
Alju04g1278 1038 SUPERFAMILY L domain-like 28 201 - -
Alju04g1278 1038 ProSiteProfiles Protein kinase domain profile. 750 1029 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g1278 1038 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 195 288 - -
Alju04g1278 1038 PANTHER LEUCINE RICH REPEAT KINASE 2 317 1027 - -
Alju04g1278 1038 Gene3D Transferase(Phosphotransferase) domain 1 826 1036 - -
Alju04g1278 1038 Gene3D Ribonuclease Inhibitor 27 197 IPR032675 -
Alju04g1278 1038 SMART serkin_6 750 1028 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g1278 1038 Gene3D Ribonuclease Inhibitor 198 388 IPR032675 -
Alju04g1278 1038 Gene3D Ribonuclease Inhibitor 389 682 IPR032675 -
Alju04g1278 1038 FunFam Serine-threonine protein kinase plant-type 730 825 - -
Alju04g1278 1038 SUPERFAMILY L domain-like 420 672 - -
Alju04g1278 1038 Pfam Leucine rich repeat 303 357 IPR001611 GO:0005515
Alju04g1278 1038 Pfam Leucine rich repeat 491 549 IPR001611 GO:0005515
Alju04g1278 1038 Pfam Leucine rich repeat 563 621 IPR001611 GO:0005515
Alju04g1278 1038 SMART LRR_sd22_2 465 488 - -
Alju04g1278 1038 SMART LRR_sd22_2 143 164 - -
Alju04g1278 1038 SMART LRR_sd22_2 536 562 - -
Alju04g1278 1038 SMART LRR_sd22_2 344 370 - -
Alju04g1278 1038 SMART LRR_sd22_2 167 188 - -
Alju04g1278 1038 SMART LRR_sd22_2 393 419 - -
Alju04g1278 1038 Pfam Protein kinase domain 751 1016 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g1278 Alju-ChrAlju04 23434794 23448974 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g1278 29 1036 Receptor kinase-like Gene Family AT3G47570 36.695 0.0 592
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Alju04g1278 Pkinase 3e-45 CL0016