Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g1272 ATGGCACATACCAATGCTCCGAGTTCTTCTACTCCTCCAAGCTCAACAATGAATTATCATGTTTTCTTAAGTTTTAGAGGAGAAGATACTCGCACAAATTTTACTGATCATTTATACTTTGCTTTACGCCGAAAGGGAATTGTAACATTTAGGGATGACGAAGAACTTCAAAGAGGAGAAGTCATTTCTGAGAAACTCATTAAAGCTATTGAGCAATCTCTTTTTTCCGTTGTTATCCTCTCTCAACATTATGCTTCTTCCTCATGGTGTTTGGATGAATTGGAGAAGATTATGGAATCCAAACAAGACTTAGGTCAAACAGTTTTTCCAGTTTTTTATGGTGTAGATCCATCTGATGTACGCCGTCAGAAAAGAAGCTTTGCCACAGCTTTTGAGAAACATGAAGGCGTATCTTCAAATGATAAAGTGCGAAGATGGAAAGAAGCTTTAACTACGATTGCTAATTTGTCTGGCTGGGATACCAGAAATAGACATGAAGCAGAGATTGTCGAAGACATTGCCAAATTCATATGGAACAAATTATGTGATAAATTTCCATCAAGGCTTGAACATTTAATTGGGGATATTGAATCAAAGGCAGAGAGTATAATCTCCTTTTTAAAGATAGGACTGGATGATAAATGCTTCATAGGGATATGGGGTATGGGTGGGATAGGCAAGACAACTCTTGCTCGAGCTGTTTATGATTCAATCCGAAGCAAGTTTGATAATTGTTGTTTTCTTGCCAATGTAAGGGAAGATTCCAAAAGGGTTGGCTTGCTTGGCTTACAAAAGAAACTTCTTTCTTGTCTTGGACTTGGAGAACCAGAATTACATGATTCCTTTCAGGGACAAGAGGTCATAAGAAATTTCTTGTGCCATAAGAAGGTTCTAATTGTTTTTGATGATGTAAGTCATAGAAGTCAATTAGATAGTTTGGCTAGAAATAAAGAGTGGTTTGGTGCAGGGAGCAAAGTAGTAATAACTACTCGAGATAAACAATTACTAACACAGTATGAACAGTTTGAAGCATATGAAGTGGGGAAGTTACATCCAGACGAGTCCCTTAAACTCTTATGTCAGAAAGCATTCAAAAAGGATGAGCCAAACCAAGGTTATTTGGATTTGTCCACAGAAGTAGTTGAATATGCCAGTGGACTTCCTTTGGCACTTGAAGTCTTGGGATCTTTTCTTTGTAGGAGAAAGCAATCTGAATGGAGAGACACATTAGAAAAATTGAGGCAAAATTTACATCATGATATTTTTAACCACCTTCGCATCAGTTATGATGGATTAGAAGATGAAGAGTACAGAAAAATGTTTTTAGATATTGCCTGTTTTTTTAATAGGGAGGCCAAATTTAAAGTGATGAATATTTTGAAAGTATGTGGCCTTCATCCAATAATTGGAATTCAAGTTCTTATAGAAAAATCTTTGCTAGGTATCCTTGAATCAAATTTAGATTCTAGGAGAAATGCAGAAGATCATCATGATGATATGCAAGATGTTCTTAAAATGTCGAGAAGGAACATTTTCTTCCCAACAAATTTCTATGACATGTTACTTCTTGATGCTTCCAAAGAATATCTATATATGCATGATTTGCTTCAAGAGATGGGAAGAAGCATTGTTTTGCAAGAATCTCCTGGTGATGCTAGTCGACGCAGTAGATTGTGGTCTATAGAGGACATTGATCTAGTGTTGAAAGGAGACAGGGGGACAGAAAACATTCAAAGTATATGTTTGGACATACAACAAGAATTTGAAGCAAAGTGGCATCCTGATTGTTTTTCAAAAATGCGAAATCTTAGAGTACTCAATTTAAGCAAGGTGCATCTTTTGCATAATCTCAATTCTCTTCCCAGTGCATTGAAGTTTCTTTCATGGGATCATTATGCTTTGGAATCTCTGCCATCATTTGATCAATTCTATGAACTTGAGTGCCTTCAATTATGCAATAGCAAAATCAGAAAACTATGGAATGGAGCACCGTTTTTAGGTAAGCTGAGGATCATTGATTTGAGTGATTCTGATTGCCTAATTGAAACTCCAGATTTCTCTGCAACACCAAATCTTGAAGAGTTGGTCCTTACTCATTGTAGTAACCTAGTTCGGATTCATGAATCTGTCGGACTGCTGAAGAAGTTGGTTAAGTTACGTTTGGATTATTGCATAAATCTAGTAACTCTTCCAAGTTATTTGGAAACAGATAATCTGGAGGAGTTTATTCTTGGCGGATGCATAAATCTTGAGAAGCTTCCTGAATTTAGCAGAAATATGACAAGTCTATACTTCTTGGATGTGAGGAGCACTCGAATCAATGAGATTCCGTTGTCCATAATTCATTTAATAAATCTCAAATATTTAGATGTGAGTGATTGCAACATGCTCAAGTCAATGCCTGAGCTCCCTCCAAATTTGATTATATGTGGAAGCTATTGTCCTCTGTTAAAGCTTACAAGAGCTCTTGGAATTCTATATGCCAGTCGTGTATTTAAGGGTCCAGTTCATGTTTTCTATGACTACATGAACTATCCTTATCTGTGGAAGAGTGGAGTTCCAAGTTGGTTTAAAGAACGGGAACATCGCCGGAGTAAGAGTAGCTCCGGCGAAGTTGTGACCATAAATGCAAACATACCTCATCATGGAAATGCATATTATAACAGTGATTGTTGGGAAATTGCTATATGCCTTGTTTTTAGGTGCAGATCAGATGAAGAAGCATGGAGAGGTTTCTCCATAAATTGGCAATTTCAAGATTATTGCCATGCCAATCCCAATGATAACAAAAAAAATCATGAAAAAACCCGGATCATTCGACGTAGTCGGCCCTGTTATCGAGTTTATGTCGGGGTTTATCCCATTGATAAAGAACACTGTCATCCAAATCCAACCGGTGTAGGCAGTCAAATTGATTTAACCCTTTGTTTCCCAACACCCATTATTACTAGTTGGAGTAAAACACGTTATCAATACTTTAAAGTTATATCATGTTGGTGGAGTTTGGAATGGAAGACTGGTTTTGGAGCAAGGTAG 3036 0.3709 MAHTNAPSSSTPPSSTMNYHVFLSFRGEDTRTNFTDHLYFALRRKGIVTFRDDEELQRGEVISEKLIKAIEQSLFSVVILSQHYASSSWCLDELEKIMESKQDLGQTVFPVFYGVDPSDVRRQKRSFATAFEKHEGVSSNDKVRRWKEALTTIANLSGWDTRNRHEAEIVEDIAKFIWNKLCDKFPSRLEHLIGDIESKAESIISFLKIGLDDKCFIGIWGMGGIGKTTLARAVYDSIRSKFDNCCFLANVREDSKRVGLLGLQKKLLSCLGLGEPELHDSFQGQEVIRNFLCHKKVLIVFDDVSHRSQLDSLARNKEWFGAGSKVVITTRDKQLLTQYEQFEAYEVGKLHPDESLKLLCQKAFKKDEPNQGYLDLSTEVVEYASGLPLALEVLGSFLCRRKQSEWRDTLEKLRQNLHHDIFNHLRISYDGLEDEEYRKMFLDIACFFNREAKFKVMNILKVCGLHPIIGIQVLIEKSLLGILESNLDSRRNAEDHHDDMQDVLKMSRRNIFFPTNFYDMLLLDASKEYLYMHDLLQEMGRSIVLQESPGDASRRSRLWSIEDIDLVLKGDRGTENIQSICLDIQQEFEAKWHPDCFSKMRNLRVLNLSKVHLLHNLNSLPSALKFLSWDHYALESLPSFDQFYELECLQLCNSKIRKLWNGAPFLGKLRIIDLSDSDCLIETPDFSATPNLEELVLTHCSNLVRIHESVGLLKKLVKLRLDYCINLVTLPSYLETDNLEEFILGGCINLEKLPEFSRNMTSLYFLDVRSTRINEIPLSIIHLINLKYLDVSDCNMLKSMPELPPNLIICGSYCPLLKLTRALGILYASRVFKGPVHVFYDYMNYPYLWKSGVPSWFKEREHRRSKSSSGEVVTINANIPHHGNAYYNSDCWEIAICLVFRCRSDEEAWRGFSINWQFQDYCHANPNDNKKNHEKTRIIRRSRPCYRVYVGVYPIDKEHCHPNPTGVGSQIDLTLCFPTPIITSWSKTRYQYFKVISCWWSLEWKTGFGAR 1011
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g1272 1011 Pfam TIR domain 18 188 IPR000157 GO:0007165
Alju04g1272 1011 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 19 813 IPR044974 GO:0006952
Alju04g1272 1011 Pfam NB-ARC domain 199 418 IPR002182 GO:0043531
Alju04g1272 1011 Coils Coil 1009 1011 - -
Alju04g1272 1011 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 176 444 IPR027417 -
Alju04g1272 1011 FunFam Disease resistance protein (TIR-NBS-LRR class) 351 433 - -
Alju04g1272 1011 FunFam Disease resistance protein (TIR-NBS-LRR class) 15 183 - -
Alju04g1272 1011 ProSiteProfiles TIR domain profile. 17 181 IPR000157 GO:0007165
Alju04g1272 1011 SUPERFAMILY Toll/Interleukin receptor TIR domain 9 159 IPR035897 -
Alju04g1272 1011 Gene3D - 349 434 IPR042197 -
Alju04g1272 1011 SMART till_3 18 156 IPR000157 GO:0007165
Alju04g1272 1011 Gene3D Ribonuclease Inhibitor 576 736 IPR032675 -
Alju04g1272 1011 Gene3D Ribonuclease Inhibitor 737 810 IPR032675 -
Alju04g1272 1011 PRINTS Disease resistance protein signature 384 398 - -
Alju04g1272 1011 PRINTS Disease resistance protein signature 291 305 - -
Alju04g1272 1011 PRINTS Disease resistance protein signature 781 797 - -
Alju04g1272 1011 PRINTS Disease resistance protein signature 216 231 - -
Alju04g1272 1011 SUPERFAMILY L domain-like 555 808 - -
Alju04g1272 1011 Gene3D - 16 181 IPR035897 -
Alju04g1272 1011 Gene3D - 182 344 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g1272 Alju-ChrAlju04 23169921 23175123 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g1272 14 801 WRKY Transcription Factor Family AT4G12020 30.902 3.65e-83 294