Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g1267 ATGCTACACATGGGAAATCCTTCTTCCTTTGTTTTCATGTTCTTGCTTCATTTCTTCATGGCCTCCTTTGTTTGGACTGATACAAACATCAGTACTGACAAATCTGCACTTCTTGCCCTTAAATCCTTTATCACTTCAGATCCATATGATTTCTTAGCTACTTGGTCTGTCTCTTCTTCTTCATGCAATTGGACTGGTGTCACATGCAATACTCGTCATGGAAGAGTCCATTCCTTGAATCTTGGCGGCATGGGTCTTAAGGGCACCATGTCTCCACATCTGGGGAATCTCTCATTCCTTGTTGAACTTGATCTCAGTGACAACAATTTTTATGGTCAAATAGCAAAAGAGTTAGTCCAATTGCGTAGATTGAAACTATTTAACTTGAGCTACAATGACTTTCATGGACAAATTCCAGCAGAGATAGGAGGTTTATCTATGCTTAAGTACTTGAGTTTTGGAAATAACGGTCTTAATGGATTCATTCCACTATCTCTATTCAATCTATCAAGGTTGGAGACTTTAGATTTGAAAGTTAATTTCATTGAAGGAACCATTCCGTTAGAGGTGGGCAGACTTGAGCGATTGAAGAATTTACAACTTAACAGTAATAAACTTTCAGGATTCATTCCCTGGACCATTTCCAACTTATCTTCGCTTGAGTTATTGAGTTTGTCTAATAACAGTTTGTCAGGTGGTATCCCAAATGAGATTGGCGATCTTTCACAACTAAAGATCTTGCCTCTTGCATTGAATCAACTTGTTGGTTCTCTACCATCTTCATTATTTAACCTTTCAGCGCTGCAACATATTGATCTTGGAAGAAATCAATTATCGGGTAGTCTTCCAAAAACTGTGTGCTTTGGGCTTCCAAAACTTGAAGTATTTTATGTGGATGGAAATGATTTGTCTGGCGAAATACCCTCCATTTGGCATCAATGCAAAGAATTAGTAGACTTACAATTGGGTGATAACAAATTCAACGGAGGAAAAATACCAAGTGAACTTGGAAATTTGACCAAACTCCAGTTTCTATATCTTAGGAACAGCAACTTGCGAGGTGAAATTCCTTCATTCCTTTGGAAGATGCCCTCTTTGAGATATTTTGGCGTTGGCATGAATCATTTAAAGGGTAATTTGCCAGAAGAAATATGCCATCAATTCCCTTTACTTGAAGTCTTTGGTGTTGATTTTAATCAAATAGAGGGAAGCATTCCAAAATCAATAAGCAACTGCACATCTTTGAAAGAATTATATTTGGATGGTAACTCATTTACAGGTGTTGTACCCAAAGGCATTGGCAAACTTGATAAACTTAATGTCTTAGACCTAAGCATTAATCATTTGAAAGGACCTATTCCTTCCAACTTATTTAACATTTCAACATTGACATACTTGGGCCTTGATGTTAATTTCCTCTCTGGCCTTCTCCCGTCATATTTAGGAATTGGCCTTCCCAACATGGAGACATTACGGCTACAGGGAAATGGATTAACTGGACAAATTCCAAGCAGCATATCAAATGCTTCTAAGCTCATTAGTTTAGATTTGTCATGGAATAAATTTAATGGAGCTATCCCTAATGTGCTTGGAAACTTAACAAACTTGATGGAATTAAATTTGCATGAGAATCATTTAAATGGTTTGATTCCAGATACACTTAACAAATTACGTAGCCTTCAACGATTAAGTCTTGCCAACAACAGATTGCAAGGGTTCATTATACATGAACTTTGCCAACTTAAAAGTCTAAGTGAGTTGTATCTTGCCAACAACATGTTGTCGGGAGTGGTTCCAAAATGTCTATGGAATACTTCTTTGCAGAAGTTAGATTTTAGCTCTAACAAATTGATTTCACATATACCCTCTTCTCTATGGAGTCTCAAAGATATCTTGGTTTTAGACATATCCTCCAATGCCTTGAGTGGAATAATTTCACCAGAGGTATCAAACTTGAGAGCAATTATACTATTAAACTTGTCAAGAAATCAAATTTCAGGAAGCATTCCTACAACTATAGGTGGCTTGAAAACTTTGCAAACCCTATCTTTGGCTGAAAACAAATTAGAAGGGCCTATTCCTGAATCGCTTAGTGGTATGATAAGCATGAACTCCCTGGATCTTTCCCATAATTATTTGTCTGGCATGATTCCGAAGTCCTTAGAGTCATTACTCTATCTTAAATACATCAATCTTTCCTACAATTTATTGCATGGAGAAATTCCAAATGGTGGCCCTTTTCAAAATTTCACTGCTCAATCTTTCATGATGAATAAAGATCTTTGTGGGAAATCCCAACTACAAGTCCAACCATGTAGGAAAGGAAACAAGCACATATCAAATAAAGTGATGCTGATAATAAAATGCTCATTGCCTATCATAGTTGCCATTTTGATTGTTTCAGTCATTATCTTTCTAAAGAATAAGAGAGATGATGATAATAATTCAACAAAGAGGGATTTAATAAATTTGGATACACCAACTAGGATATCCTATTATGAGCTTCTACAAGGAACAGATGGATTTGATGAGAGTAATCTTGTTGGTTCCGGAAGTTTTGGATCAATATACAAAGCAGTTCTTCCAAATGAAAAGATAGTTGCTGTCAAAGTGTTTAACTTAGACATGGAACAATCATCAAGAAGTTTTGATGTTGAATGTTCTGCCATGTGCCATTTACGCCACCGCAATCTCATTAAGATCATCAGTAGTTGCTCAAATGATTATTTCAAATCTCTAATAATGGAATTCATGGAAAATGGGAGTCTTGACAAATGGTTGTACTCTCATAACAATTATTTAGATGTCTTGCAAAGGTTGAACATAATGATTGATGTGGCAGCTGCTTTGGAGTATCTTCATCATGGTTCTTCTACACTAGTTGTTCATTGTGATGTGAAACCAAGTAATGTTTTGTTGGATGAAGATATGGTGGCTCATCTTAGTGATTTTGGTATTTCTAAATTGTTTGGTGAAAAGCATTTGGAAATTTATACCAATACTTTAGCTACAATTGGCTATATGGCACCAGAGTTTGGATCAAAAGGAGTTGTTTCCGCCAAAGGAGATGTGTATAGTTATGGAATTTTGCTGATGGAGGTGTTTACAAGGAAGAAGCCAACAGATGAGATGTTTGTTCAAGGATTAAGTTTGAAAGATTGGGTGAGAAACTCCACACCACATTCCATCATGAATATTATAGATGCCAATTTGCTACACAGAGAAAATCAAAATACTAATAATATACTACCTTATATGTCATCAGTTTTTGAGTTAGCATTAAATTGTTCCATTGACATACCAGAGGCACGACTTACTATGACTGATGTTGTAGTATCATTGAAAAAAATCAAGGCTTTGTTTATGGAAAATGCTTGA 3378 0.3606 MLHMGNPSSFVFMFLLHFFMASFVWTDTNISTDKSALLALKSFITSDPYDFLATWSVSSSSCNWTGVTCNTRHGRVHSLNLGGMGLKGTMSPHLGNLSFLVELDLSDNNFYGQIAKELVQLRRLKLFNLSYNDFHGQIPAEIGGLSMLKYLSFGNNGLNGFIPLSLFNLSRLETLDLKVNFIEGTIPLEVGRLERLKNLQLNSNKLSGFIPWTISNLSSLELLSLSNNSLSGGIPNEIGDLSQLKILPLALNQLVGSLPSSLFNLSALQHIDLGRNQLSGSLPKTVCFGLPKLEVFYVDGNDLSGEIPSIWHQCKELVDLQLGDNKFNGGKIPSELGNLTKLQFLYLRNSNLRGEIPSFLWKMPSLRYFGVGMNHLKGNLPEEICHQFPLLEVFGVDFNQIEGSIPKSISNCTSLKELYLDGNSFTGVVPKGIGKLDKLNVLDLSINHLKGPIPSNLFNISTLTYLGLDVNFLSGLLPSYLGIGLPNMETLRLQGNGLTGQIPSSISNASKLISLDLSWNKFNGAIPNVLGNLTNLMELNLHENHLNGLIPDTLNKLRSLQRLSLANNRLQGFIIHELCQLKSLSELYLANNMLSGVVPKCLWNTSLQKLDFSSNKLISHIPSSLWSLKDILVLDISSNALSGIISPEVSNLRAIILLNLSRNQISGSIPTTIGGLKTLQTLSLAENKLEGPIPESLSGMISMNSLDLSHNYLSGMIPKSLESLLYLKYINLSYNLLHGEIPNGGPFQNFTAQSFMMNKDLCGKSQLQVQPCRKGNKHISNKVMLIIKCSLPIIVAILIVSVIIFLKNKRDDDNNSTKRDLINLDTPTRISYYELLQGTDGFDESNLVGSGSFGSIYKAVLPNEKIVAVKVFNLDMEQSSRSFDVECSAMCHLRHRNLIKIISSCSNDYFKSLIMEFMENGSLDKWLYSHNNYLDVLQRLNIMIDVAAALEYLHHGSSTLVVHCDVKPSNVLLDEDMVAHLSDFGISKLFGEKHLEIYTNTLATIGYMAPEFGSKGVVSAKGDVYSYGILLMEVFTRKKPTDEMFVQGLSLKDWVRNSTPHSIMNIIDANLLHRENQNTNNILPYMSSVFELALNCSIDIPEARLTMTDVVVSLKKIKALFMENA 1125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g1267 1125 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 531 1115 - -
Alju04g1267 1125 SMART LRR_sd22_2 604 620 - -
Alju04g1267 1125 SMART LRR_sd22_2 581 599 - -
Alju04g1267 1125 SMART LRR_sd22_2 145 166 - -
Alju04g1267 1125 SMART LRR_sd22_2 485 511 - -
Alju04g1267 1125 SMART LRR_sd22_2 193 219 - -
Alju04g1267 1125 SMART LRR_sd22_2 169 190 - -
Alju04g1267 1125 SMART LRR_sd22_2 676 699 - -
Alju04g1267 1125 SMART LRR_sd22_2 436 462 - -
Alju04g1267 1125 FunFam Serine-threonine protein kinase plant-type 823 917 - -
Alju04g1267 1125 SMART serkin_6 842 1121 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g1267 1125 Gene3D Transferase(Phosphotransferase) domain 1 918 1123 - -
Alju04g1267 1125 SUPERFAMILY RNI-like 319 738 - -
Alju04g1267 1125 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 485 776 - -
Alju04g1267 1125 Pfam Leucine rich repeat 243 303 IPR001611 GO:0005515
Alju04g1267 1125 Pfam Leucine rich repeat 678 737 IPR001611 GO:0005515
Alju04g1267 1125 Pfam Leucine rich repeat 391 449 IPR001611 GO:0005515
Alju04g1267 1125 Pfam Leucine rich repeat 534 594 IPR001611 GO:0005515
Alju04g1267 1125 Pfam Leucine rich repeat N-terminal domain 32 70 IPR013210 -
Alju04g1267 1125 Gene3D Ribonuclease Inhibitor 185 289 IPR032675 -
Alju04g1267 1125 SUPERFAMILY L domain-like 50 380 - -
Alju04g1267 1125 Gene3D Ribonuclease Inhibitor 30 184 IPR032675 -
Alju04g1267 1125 Pfam Protein kinase domain 844 1111 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g1267 1125 ProSitePatterns Protein kinases ATP-binding region signature. 848 870 IPR017441 GO:0005524
Alju04g1267 1125 ProSitePatterns Serine/Threonine protein kinases active-site signature. 961 973 IPR008271 GO:0004672|GO:0006468
Alju04g1267 1125 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 918 1125 - -
Alju04g1267 1125 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 286 484 - -
Alju04g1267 1125 SMART LRR_typ_2 700 723 IPR003591 -
Alju04g1267 1125 SMART LRR_typ_2 339 363 IPR003591 -
Alju04g1267 1125 SMART LRR_typ_2 97 121 IPR003591 -
Alju04g1267 1125 SMART LRR_typ_2 265 289 IPR003591 -
Alju04g1267 1125 SMART LRR_typ_2 557 580 IPR003591 -
Alju04g1267 1125 SMART LRR_typ_2 193 216 IPR003591 -
Alju04g1267 1125 SMART LRR_typ_2 533 556 IPR003591 -
Alju04g1267 1125 SMART LRR_typ_2 485 509 IPR003591 -
Alju04g1267 1125 SMART LRR_typ_2 145 169 IPR003591 -
Alju04g1267 1125 SMART LRR_typ_2 652 676 IPR003591 -
Alju04g1267 1125 SMART LRR_typ_2 605 628 IPR003591 -
Alju04g1267 1125 SMART LRR_typ_2 581 604 IPR003591 -
Alju04g1267 1125 SMART LRR_typ_2 217 241 IPR003591 -
Alju04g1267 1125 SMART LRR_typ_2 436 460 IPR003591 -
Alju04g1267 1125 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 189 282 - -
Alju04g1267 1125 ProSiteProfiles Protein kinase domain profile. 842 1121 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g1267 1125 Gene3D Ribonuclease Inhibitor 481 774 IPR032675 -
Alju04g1267 1125 Gene3D Ribonuclease Inhibitor 290 480 IPR032675 -
Alju04g1267 1125 SUPERFAMILY Protein kinase-like (PK-like) 817 1114 IPR011009 -
Alju04g1267 1125 Gene3D Phosphorylase Kinase; domain 1 803 917 - -
Alju04g1267 1125 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 30 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g1267 Alju-ChrAlju04 22905641 22919524 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g1267 8 1119 Receptor kinase-like Gene Family AT5G46330 33.790 0.0 559
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Alju04g1267 Pkinase 8.6e-45 CL0016