Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g1258 ATGTCCACCATTCTTCTTCCTCCTCCTCTGTCTCTCCTCTTCCTCCTCCTTCTACCCTCCATTCTCTCCCTCAACCAGGAGGGTCTTTACCTTTACCAGTTCAAGCTCTCTCTCGACGACCCTGACGCCTCTCTCTCCTCCTGGAACCCCCGCGACGCCACTCCATGTGCCTGGTCCGGCGTCACCTGCGGCGGCGTTTCCAACTCCTCCGTCACTCGCCTTGACCTCTCCAACACCAACATCGCCGGCCCATTATCCGCCTCCATCCTCTGCCGCCTTCCCAACCTCTCCTTCGTCTCCTTCTTCAATAACTCTGTCAATCAAACCCTCCCTTCAGAAATCTCCTCTTGTCGCTCTCTCGTTCACCTAGACCTTTCCCAGAATCTCCTCACAGGTGAACTCCCACATACTCTGTCTCTGCTTCCCAATCTCAGATACGTGGACTTGACCGGAAACAATTTCTCTGGTCCTATTCCTGACTCATTTGGGAGCTTCCGGAAGCTAGAGGTTATTTCTCTTGTGTCTAATCTTCTAGAAGGTACCATTCCCGCTTCTCTGGGTAATATTTCAACATTGAAGATGCTCAATCTTTCGTACAACCCGTTTTATCCGGGTCGGATCCCGCCGGAGATCGGGAACCTTACTAATCTGGAGGTGCTTTGGTTAACGCAATGTAACTTGGTTGGAACGATTCCCAACGAGCTGGGGAAGTTGAAGAAGCTGAAGGATTTGGACCTGGCGTTCAATAATTTGTACGGGTCGATTCCGAGTTCGCTCATGGAGATGACGAGTTTGAACCAGATTGAACTTTACAATAACTCATTGTCCGGTGAGTTGCCTCGGGGATGGTCGAACCTCACTGCATTGAGGCTGCTCGACGCGTCGATGAACCACTTGACGGGGACGATTCCCGATGACTTGTGTCGTTTGCCTCTGGAAAGCCTCAATCTCTATGAAAATCGTTTAGAGGGCGAGTTACCGGAGAGCATAGCGGACTCTCCGAATCTCTATGAGCTGAGATTGTTCGGGAATAGGCTCACGGGGAAGCTTCCGGCGAGTCTTGGCAAAAATTCGCCATTACGGTGGATCGACCTTTCGACCAACCAGTTCTGGGGAGAAATTCCGGCTAGTTTGTGTGACCAAGGGCAGTTGGAGGAGCTTCTGATGATATACAATTTGTTTTCTGGTGAGATCCCGGCGAGTCTGGGGATGTGTCAGAGCTTGACACGAGTCAGATTAGGTTTCAATCGGTTGTCCGGCGAAGTTCCGGCGGGCATATGGGGGCTTCCGCATGTATACCTTCTGGAGCTTGTTGATAACTCTTTTTCGGGTCCAATTTCTTCAACGATCGCTGGGGCTGGGAATCTGTCGTTATTGGTTCTATCGAAGAACAATTTCAGTGGAGCGATCCCTGATGAGATTGGATGGTTGGAAAATCTTGAGCAATTTTCTGGGAGTGATAACAACTTTACTGGGTCGCTGCCTGATAGCATTGTAAATCTTGGGCAACTTGGAACTCTCGATCTTCACAACAATAAACTCTCTGGCCAGCTTCCGAAGGGTGTGCGATCTTTGAAGAAACTCAATGAGTTGAATTTGGCCAACAATGAGATTAACGGAAAAATTCCTGATGAAATTGGCAGTTTGTCCGTGCTTAATTTTCTTGATCTTTCCCACAATCAACTTGCCGGGAAAGTTCCTCGTGGGTTACAGAATTTGAAGCTGAACCAGCTGAATTTGTCGTATAATCGACTTTCTGGAGAACTTCCCCCTCAGTTGGCTAAGGATATGTACAGGACTAGCTTTTTGGGTAATCCTGGTTTGTGTGGGGATCTGAAAGGTCTATGTGATGGCAGAAATGATGCTAAAAATGCAGGTTATATTTGGTTGCTGCGAGCTATGTTCATCATTGCTACTTTGGTGCTTCTCATTGGTGTGGTCTGGTTCTATTTCAAGTACAGGAACTTTAAGAACGCAAGAAGAGCTATTGATAAATCAAAATGGACTCTGATGTCGTTCCATAAACTGGGTTTCGGTGAAGATGAGATTCTGAACTGCCTTGATGATGACAATGTGATAGGAACTGGATCATCAGGGAAAGTTTACAAGGTTGTACTTAGCAATGGGGAGGCAGTTGCTGTGAAGAAACTATGGGGAGGTATCACAAAGGACATAGAGAGTGGTGATTTTGAGAAGGGCCAGGTTCAAGATAATGTTTTTGATGCTGAGGTTGAGACTCTCGGCAAAATTAGGCATAAGAACATTGTTAAGTTGTGGTGTTGCTGTACTACTAGGGACTGCAAGCTCTTGGTATATGAGTACATGCCTAATGGTAGTCTTGGAGATTTACTACATAGTAGTAAAGGCGGATTGTTAGATTGGCCGACGAGGTATAAGATAGCAGTTGATGCTGCAGAAGGCCTCTCTTATTTGCATCATGACTGTGTCCCGCCAATTGTTCATAGAGATGTAAAATCCAACAATATCTTGTTGGATGGTGACTTTGGCGCAAGGGTGGCTGATTTTGGAGTTGCCAAGGTTGTTGAAACCACTGCAAAGGGAGTTAAATCCATGTCTACCATAGCTGGATCATGTGGATACATTGCACCAGAATATGCATACACTCTCAGAGTGAATGAGAAGAGTGACATATATAGTTTCGGGGTTGTCATACTCGAGTTAGTTACTAGAAGGCGCCCGGTAGACCCGGAATTTGGGGAAAAAGACTTGGTTAAGTGGGTATGCACCACCATAGATCAGAAAGGTATGGATCATGTACTTGACTCCAGTCTTGATTCTTGTTTCAAAGAAGAGATCTCCAAGGTCCTCAACATTGGCCTCATGTGCACTAGCCCTCTTCCAATCAACCGCCCCGCCATGAGAAGAGTGGTGAAGATGTTGCAAGAAGTAGGCGCAGACAGCAACCAAACGAAGGCATCGAAGAAAGATGGCAAGTTGTCACCATATTACTACGACGAGGGCTCTGATCATGGAAGTGTAGCTTAG 3006 0.4694 MSTILLPPPLSLLFLLLLPSILSLNQEGLYLYQFKLSLDDPDASLSSWNPRDATPCAWSGVTCGGVSNSSVTRLDLSNTNIAGPLSASILCRLPNLSFVSFFNNSVNQTLPSEISSCRSLVHLDLSQNLLTGELPHTLSLLPNLRYVDLTGNNFSGPIPDSFGSFRKLEVISLVSNLLEGTIPASLGNISTLKMLNLSYNPFYPGRIPPEIGNLTNLEVLWLTQCNLVGTIPNELGKLKKLKDLDLAFNNLYGSIPSSLMEMTSLNQIELYNNSLSGELPRGWSNLTALRLLDASMNHLTGTIPDDLCRLPLESLNLYENRLEGELPESIADSPNLYELRLFGNRLTGKLPASLGKNSPLRWIDLSTNQFWGEIPASLCDQGQLEELLMIYNLFSGEIPASLGMCQSLTRVRLGFNRLSGEVPAGIWGLPHVYLLELVDNSFSGPISSTIAGAGNLSLLVLSKNNFSGAIPDEIGWLENLEQFSGSDNNFTGSLPDSIVNLGQLGTLDLHNNKLSGQLPKGVRSLKKLNELNLANNEINGKIPDEIGSLSVLNFLDLSHNQLAGKVPRGLQNLKLNQLNLSYNRLSGELPPQLAKDMYRTSFLGNPGLCGDLKGLCDGRNDAKNAGYIWLLRAMFIIATLVLLIGVVWFYFKYRNFKNARRAIDKSKWTLMSFHKLGFGEDEILNCLDDDNVIGTGSSGKVYKVVLSNGEAVAVKKLWGGITKDIESGDFEKGQVQDNVFDAEVETLGKIRHKNIVKLWCCCTTRDCKLLVYEYMPNGSLGDLLHSSKGGLLDWPTRYKIAVDAAEGLSYLHHDCVPPIVHRDVKSNNILLDGDFGARVADFGVAKVVETTAKGVKSMSTIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTRRRPVDPEFGEKDLVKWVCTTIDQKGMDHVLDSSLDSCFKEEISKVLNIGLMCTSPLPINRPAMRRVVKMLQEVGADSNQTKASKKDGKLSPYYYDEGSDHGSVA 1001
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g1258 1001 MobiDBLite consensus disorder prediction 973 1001 - -
Alju04g1258 1001 SMART serkin_6 687 990 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g1258 1001 FunFam Receptor-like protein kinase HSL1 671 774 - -
Alju04g1258 1001 SUPERFAMILY L domain-like 312 609 - -
Alju04g1258 1001 Gene3D Ribonuclease Inhibitor 205 311 IPR032675 -
Alju04g1258 1001 Pfam Leucine rich repeat N-terminal domain 25 63 IPR013210 -
Alju04g1258 1001 SMART LRR_typ_2 214 238 IPR003591 -
Alju04g1258 1001 SMART LRR_typ_2 286 310 IPR003591 -
Alju04g1258 1001 SMART LRR_typ_2 501 524 IPR003591 -
Alju04g1258 1001 SMART LRR_typ_2 141 164 IPR003591 -
Alju04g1258 1001 SMART LRR_typ_2 525 549 IPR003591 -
Alju04g1258 1001 SMART LRR_typ_2 93 117 IPR003591 -
Alju04g1258 1001 Gene3D Transferase(Phosphotransferase) domain 1 775 993 - -
Alju04g1258 1001 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 775 984 - -
Alju04g1258 1001 Pfam Leucine Rich Repeat 143 165 IPR001611 GO:0005515
Alju04g1258 1001 Gene3D Phosphorylase Kinase; domain 1 671 774 - -
Alju04g1258 1001 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 192 969 - -
Alju04g1258 1001 SUPERFAMILY RNI-like 73 416 - -
Alju04g1258 1001 FunFam Receptor-like protein kinase HSL1 311 618 - -
Alju04g1258 1001 Gene3D Ribonuclease Inhibitor 22 204 IPR032675 -
Alju04g1258 1001 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 24 189 - -
Alju04g1258 1001 ProSiteProfiles Protein kinase domain profile. 687 970 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g1258 1001 ProSitePatterns Serine/Threonine protein kinases active-site signature. 819 831 IPR008271 GO:0004672|GO:0006468
Alju04g1258 1001 Pfam Protein kinase domain 690 911 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g1258 1001 SUPERFAMILY Protein kinase-like (PK-like) 683 968 IPR011009 -
Alju04g1258 1001 Pfam Leucine rich repeat 504 562 IPR001611 GO:0005515
Alju04g1258 1001 ProSitePatterns Protein kinases ATP-binding region signature. 693 716 IPR017441 GO:0005524
Alju04g1258 1001 FunFam Leucine-rich receptor-like protein kinase family protein 207 305 - -
Alju04g1258 1001 MobiDBLite consensus disorder prediction 976 990 - -
Alju04g1258 1001 Gene3D Ribonuclease Inhibitor 312 619 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g1258 Alju-ChrAlju04 22767788 22771016 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g1258 19 1001 Receptor kinase-like Gene Family AT1G28440 71.385 0.0 1441
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Alju04g1258 Pkinase 4.8e-41 CL0016