Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g1248 ATGGAAGGAAAACAAGAAGAGATTATCGAAGGAGAAGATTTGTTTGAAGCACAAGCAGATTTGTTCAAACACATTTTCAGTTTTGTAAGATCTATGTGCCTTAAAACTGCTCTCCAGATGAGAATACCAGACACAATCTTCAACCATGGCAAACCCATCACTCTTCCTCAGTTAATCTCAGCCCTTAAAATCAACCCTTCAAGATCCAACCATGTCTACAGGCTCATGCGCTTACTGGTTCATTCTGGAATCTTCACTTTAACCAAAATCCCTAAAGAAAAAGATGAAGAAGAAGAAGAAGAAGAAGAAGGTTATGATCTCACACCATGTTCTAGGCTTCTTCTCAAAGATAAGATTCCCTCCATGTTAGCTTATGCTCAAGTAGTGTTTCATCCAGCAGTGATGAACCCAGTTCTGTTCTTGGGAGATTGGCTTTATAATAACGAAGACGATAACAACGACAACAACAATAACACAGCTTTTCAAAGTTGTTTTGGGATGGAATTTTGGAGATACGGAAGTGAGAATCCTGAATTTAGCAGAGTGTTTAATGAAGGTATGATTAGTGATTGTGGGATGATGAACTTGGTGATGAAGAAGTTTAAGTCGGTGTTTTGGGGTTTGAAGTCTTTGGTTGATGTTGGAGGAGGCAAAGGTGGTGCAGCCATTGCCATTTCTGAGGAATTTCCAGATTTGAAGTTCACAGTTATGGATCTTCCTCATGTTGTTGCAGATTTGAAGGATTGTGACAATTTAAAGTTCGTAGGAGGTGATATGTTTCAGTCTATTCCTTCTGCTGATGCCATTCTTCTTAAGCTAGTTTTGCACACATTAAGCAATGAAGAGTGTGAGAAGGCATTGAAGAATTGCAGAGAAGCCATTTCAAGCAAAGGGAAAGTAATAATAATAGACATAGTAATCAACAATGAAGAGAAAGAAGAAAAGCATGAAATTACAGAAGCCAAGCTTTATTTTGATGTGATGATGATGTGTTTGGTGAATGGAAAAGAAAGAGATGAAAAAGAATGGAAGAAACTATTCTTCAAAGCTGGATTTAGTGACTACAAGATCACACCTTTATTTGGTTTAAGGTCCCTCATTGAAGTTTATCCTTAA 1116 0.3763 MEGKQEEIIEGEDLFEAQADLFKHIFSFVRSMCLKTALQMRIPDTIFNHGKPITLPQLISALKINPSRSNHVYRLMRLLVHSGIFTLTKIPKEKDEEEEEEEEGYDLTPCSRLLLKDKIPSMLAYAQVVFHPAVMNPVLFLGDWLYNNEDDNNDNNNNTAFQSCFGMEFWRYGSENPEFSRVFNEGMISDCGMMNLVMKKFKSVFWGLKSLVDVGGGKGGAAIAISEEFPDLKFTVMDLPHVVADLKDCDNLKFVGGDMFQSIPSADAILLKLVLHTLSNEECEKALKNCREAISSKGKVIIIDIVINNEEKEEKHEITEAKLYFDVMMMCLVNGKERDEKEWKKLFFKAGFSDYKITPLFGLRSLIEVYP 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g1248 371 Pfam O-methyltransferase domain 153 353 IPR001077 GO:0008171
Alju04g1248 371 FunFam O-methyltransferase ZRP4 116 371 - -
Alju04g1248 371 PIRSF O-mtase 2 371 IPR016461 GO:0008168
Alju04g1248 371 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 22 371 IPR016461 GO:0008168
Alju04g1248 371 FunFam Coniferyl alcohol 9-O-methyltransferase 4 114 - -
Alju04g1248 371 SUPERFAMILY "Winged helix" DNA-binding domain 12 117 IPR036390 -
Alju04g1248 371 Gene3D - 4 114 IPR036388 -
Alju04g1248 371 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 121 370 IPR029063 -
Alju04g1248 371 PANTHER O-METHYLTRANSFERASE 16 356 IPR016461 GO:0008168
Alju04g1248 371 Pfam Dimerisation domain 32 80 IPR012967 GO:0046983
Alju04g1248 371 Gene3D Vaccinia Virus protein VP39 116 371 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g1248 Alju-ChrAlju04 22412744 22415346 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g1248 29 357 Monolignol Biosynthesis Gene Families AT5G54160 32.229 2.38e-43 152