Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g1219 ATGGACCTACGAAACACAGTGATTCTTCTTCTGCTGCTTCTGTTCCAAGTTCTGATCATAGCAGCACAGAACTCCAACCAAGACTTTACAGCTTTATCATCTCTCACTGAGTTTTGGGAAAACAAGCCACCAAGTTGGGTAGGTACAGATCCTTGTGGTGGTGGTTGGGAAGGCATTGGATGTACCAAATCAAAAGTGACCACAATAAAATTGTTAAGCATGAACTTTAAAGGAAGCTTGACAGAGGCTATAGGGAGATTAACTGAATTAATGACTCTGGACCTCTCTTACAACAAAGGCATGAGTGGAAGAATTCCAGCTGAAATTGGGAATCTGAGTAAATTACAAACCCTGTCATTGGTTGGTTGTGATTTCTTTGGTCCTATTCCTGATTCATTAGGAGCTCTTAATCAGCTGACCTTTTTAGCTCTTAATCTTAATCGGTTGAGTGGGCCTATTCCACGTACGTTTGGCAATCTGTCAAATGTTATTTGGCTAGATATTTCAGACAACCAAATTGAAGGACCCATCCCTATCTCTGATGAACAGGGACCTGGTCTTGACATGCTACTCAAAACAGAGCACTTTCATTTTGGAAACAACCTCCTCTCAGGGAAAGTTCCAGCTAAGCTTTTCAGCTCAAATATGATACTGAATCACCTGCTTCTTGACAACAATAATCTAAGTGGCAGCATTCCAGACACTATTGGATTAGTGAAGACATTGACGGTGATACACTGTGATCGCAATCATATCACTGGAGAAGTACCTTCAAGTATCGGAAAGCTCTCAAAACTCACTGATCTGAAGTTAGGCAACAATCAGCTAAATGGCTCTATGCCCGATCTTACTGGATTAAATTCACTCGTCACTGTGGATTTGAGCAACAACTCTTTTAAGTCTTCCAGTGTCCCTTCTTGGGCTTCAAGTTTGCCATATCTAACTACATTAACATTGGAAAACACTGGACTGCAAGGGAAAATACCTACCTCCTTATTTAGCCAGCCTAATATAGAGACTGTGGTAATGAGGAATAATCAGCTCAATGGTACCTTGGATGTTAGCAACTACACACCCAATTTGGGTCTTATAGATTTGAGGACAAATAAGATAACTGACTTTACTCAAGAAAGTCAAAAAATCACTGTTAATGTCACACTAGTTGGCAACCCCATTTGTCTAGAAACAGGAGCCGATTCACAAAGTTACTGCAGCAACTCACAAAATAGTATCAAATATTCAACAGTACCAAATAACTGTATACCTCCTCCTTGTATTTCAGACATGGCTTCCAGCCCAAACTGCAAATGTGCATTGCCCTATACGGGAGTTCTGACTTGTATAGCTCCCGGTTTCTCGAACTATGGAAACATAAGTTATTTCAAGGTTCTTGAGCAAGGCTTGTTGGCCGCTTTCCAGTCCCAACACCTTCCAGTGGATTCAGTTTCTCTCACCAACCCATTCTGGAACCCTTCTTCTGGTAATTTTAGATTGGACCTAAAAGTCTTCCCATCTCAAAGTGACCGTTTCAACAGAACTGGAGTTGTAAGCATTGCGTTTGTGCTCTCCAACCAGATCTATAAAGCTCCAGATTTTTTCATCCCATACAGTTTTTTTGGTAACGGTAGCTATGATTTCTCCAAAGAAAAGTCTTCATCAAGTAAAATCAGTACGGGGGTTATAGCTGGTGCAGTAGCTGCAGGTGTTGTCATTTTGGTACTGTCCATCTTTGCAATATTTGCAATCCGCCAGAAGAAAAGAACAAAGGCATTTAATCCTTTTGCTAACTGGGAACAGAACAATAAAAGTGGCAATGCTCCTCAGCTAAAAGGAGCGCGCTGGTTTTCTTTTGAAGAGCTTAAGAAATATAGCAACAACTTTTCTGACTCCAATACTATCGGAGCCGGGGGCTATGGAAAGGTTTACCAAGCTGTACTTCCCTCTGGGGAACTGGTCGCTATCAAGCGTGCTTCACATGAATCGATACAGGGTGCTGTTGAGTTCAAAACTGAGATTGAGCTTCTATCAAGGGTCCATCACAAGAATCTTGTGGGTCTTGTGGGTTTCTGTTATGATAAAGGTGAACAAATGCTGGTATATGAGTATGTTCCTAATGGCACTATATTGGACAGTCTTTCAGGAACATCTGGAATTAGAATGAACTGGATAAGGAGGCTAAAAGTAACTGTGGGAGCAGCCAGAGGGCTAGCCTATCTTCATGAACTTGCAGATCCACCAATCATACACAGGGACATAAAATCAAGTAGTATCCTACTTGATGACCATCTAAATGCAAAAGTTGCTGATTTTGGTCTCTCCAAACTTAAGGATAGTGACAGGGGCCATATCACAACTCAAGTCAAAGGCACAATGGGGTATATGGATCCTGAATACTACATGACTCAGCGGTTAACAGAAAAGAGCGATGTATATAGCTTTGGAATTACAATGCTTGAGCTGGTAACAGCAAGGAAGCCAATAGTGCAAGGAAGGTTCATTGTAAGAGAGGTTCTAAGAATAATGGATAGATCAAAAGAGTTGTACAATCTTCATGCCCTTATAGATCCAATGATAAAGCAAGAAGGAAACCCAAAAGGCTTAGAGAAATTTGTGGACTTAGCATTGAATTGTGTCAAAGATCATGCAGAAGAGAGACCAACAATGGCTGATGTTGTGAAAGAGATTGAGAATATACTGCAACTTGCCGGTTTCAACCTCAATGCTGAATCAACATCAACATCAGAAACTTATGAAAATGCCAGTGGTGGGAAGATTTACCATCCTTATGTCGATGAAGATTTCGCCTACACGAGCGTTTTTCCACCGGTAAAGGTGGAACCTCAGTAA 2847 0.4113 MDLRNTVILLLLLLFQVLIIAAQNSNQDFTALSSLTEFWENKPPSWVGTDPCGGGWEGIGCTKSKVTTIKLLSMNFKGSLTEAIGRLTELMTLDLSYNKGMSGRIPAEIGNLSKLQTLSLVGCDFFGPIPDSLGALNQLTFLALNLNRLSGPIPRTFGNLSNVIWLDISDNQIEGPIPISDEQGPGLDMLLKTEHFHFGNNLLSGKVPAKLFSSNMILNHLLLDNNNLSGSIPDTIGLVKTLTVIHCDRNHITGEVPSSIGKLSKLTDLKLGNNQLNGSMPDLTGLNSLVTVDLSNNSFKSSSVPSWASSLPYLTTLTLENTGLQGKIPTSLFSQPNIETVVMRNNQLNGTLDVSNYTPNLGLIDLRTNKITDFTQESQKITVNVTLVGNPICLETGADSQSYCSNSQNSIKYSTVPNNCIPPPCISDMASSPNCKCALPYTGVLTCIAPGFSNYGNISYFKVLEQGLLAAFQSQHLPVDSVSLTNPFWNPSSGNFRLDLKVFPSQSDRFNRTGVVSIAFVLSNQIYKAPDFFIPYSFFGNGSYDFSKEKSSSSKISTGVIAGAVAAGVVILVLSIFAIFAIRQKKRTKAFNPFANWEQNNKSGNAPQLKGARWFSFEELKKYSNNFSDSNTIGAGGYGKVYQAVLPSGELVAIKRASHESIQGAVEFKTEIELLSRVHHKNLVGLVGFCYDKGEQMLVYEYVPNGTILDSLSGTSGIRMNWIRRLKVTVGAARGLAYLHELADPPIIHRDIKSSSILLDDHLNAKVADFGLSKLKDSDRGHITTQVKGTMGYMDPEYYMTQRLTEKSDVYSFGITMLELVTARKPIVQGRFIVREVLRIMDRSKELYNLHALIDPMIKQEGNPKGLEKFVDLALNCVKDHAEERPTMADVVKEIENILQLAGFNLNAESTSTSETYENASGGKIYHPYVDEDFAYTSVFPPVKVEPQ 948
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g1219 948 PANTHER RECEPTOR-LIKE PROTEIN 55 33 898 - -
Alju04g1219 948 FunFam Leucine-rich repeat protein kinase family protein 594 702 - -
Alju04g1219 948 Pfam Protein kinase domain 628 893 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g1219 948 CDD STKc_IRAK 633 898 - -
Alju04g1219 948 Gene3D Transferase(Phosphotransferase) domain 1 703 920 - -
Alju04g1219 948 ProSiteProfiles Protein kinase domain profile. 627 899 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g1219 948 Gene3D Ribonuclease Inhibitor 23 181 IPR032675 -
Alju04g1219 948 SMART serkin_6 627 899 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g1219 948 Gene3D Phosphorylase Kinase; domain 1 597 702 - -
Alju04g1219 948 SUPERFAMILY Protein kinase-like (PK-like) 610 901 IPR011009 -
Alju04g1219 948 Gene3D Ribonuclease Inhibitor 182 420 IPR032675 -
Alju04g1219 948 ProSitePatterns Protein kinases ATP-binding region signature. 633 655 IPR017441 GO:0005524
Alju04g1219 948 FunFam Leucine-rich repeat protein kinase family protein 183 282 - -
Alju04g1219 948 FunFam Leucine-rich repeat family protein 27 182 - -
Alju04g1219 948 SUPERFAMILY L domain-like 46 380 - -
Alju04g1219 948 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 703 912 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g1219 Alju-ChrAlju04 21595900 21609129 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g1219 8 948 Receptor kinase-like Gene Family AT5G49760 51.158 0.0 927
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Alju04g1219 Pkinase 9.2e-45 CL0016