Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g1217 ATGGACCAACGAAACACAGAGATTCTCCTTCCTCTGTTGCTTCTGTTCCAAGTTCTGCTCATAGCAGCACAGAACTCCAACCAAGACTTTACAGCTTTATCATCTCTCGCTGAGTTTTGGGAAAACAAGCCACCAAGTTGGGTGGGTACAGATCCTTGTGGTGGTGGTTGGGAAGGCATTGAATGTGCCAAATCAAGAGTGACCTCAATAAAATTGTTAAGCATGAACTTAAAAGGCAGCTTGACAGAGGCTATAGGGAGATTGACTGAATTAATGACTCTGGACCTCTCTTACAACAAAGGCATGAGTGGAAGAATTCCAGCTGAAATTGGGAATCTGAGTAAATTACAAACCCTGTCATTGGTTGGTTGTGATTTCTTTGGTGCTATTCCTGAATCAATAGGAGCTCTTAATCAGCTGACCTTTTTAGCTCTTAATCTTAATCGGTTGAGTGGGCCTATTCCACGTACATTTGGCAATCTATCCAATGTTAATTGGCTAGATATTGCAGACAACCAGATTGAAGGACCTATCCCTATCTCTGATGAACAAGGACCTGGTCTTGACATGCTACTCAAAACAGAGCACTTTCATTTCGGAAACAACCTCCTCTTTGGACAAGTTCAACCTAAGCTTTTCAGCTCAAATATGATACTAAAACACTTGCTTCTTGACAACAATAACCTAAGTGGCAGCATTCCAGACACTATGGGATTAGTGAAGACATTGGCGGTAATACGCTATGATCACAATCATATGACTGGAGATGTGCCTTCAAGTATCAGTAATCTCACAAAACTCGCTGATCTGAATTTAGGCAACAATAAGCTAAGTGGCTCTATGCCCGATCTTACTGGATTAAATTCACTCGCTACTGTGGATTTGAGCAACAACTCTTTTAATTCTTCCAGTATCCCTTCGTGGGCTTCAAGTTTGCCATATCTAACTACATTAACATTGGAAAACACTGGACGCCAAGGGAAAATACCTACCTCCTTATTTAGCCAGCTTAACATAGAGACTGTGATAATGAGGAATAATCAGCTCAATGGTACCTTGGATGTTAGCAGCTACACACCCAATTTGGGTCTTGTAGATTTGGGGACTAATAAGATAACTGACTTTGCTCAGAAAAGTCAAAAAATCACTTTTAATGTCACACTAGTTGGCAACCCCATATGTCTAGAAACAGGAGCTGATTCACAAAGTTACTGCACAAACTCACAAAATAGTGTCACATATTCAACAGTGCCGAATAACTGTATACCTCCTCCTTGTAGTTCAAACATGGTTTCCAGCCCAAACTGCAAATGTGCATTTCCCTATACAGGAGTTCTGACTTCTAGAGCTCCTGGTTTCTCAAACTTCGGAAACAGAAGTTATTTTAAGGATCTTGAGCATGGCTTGTTGGCTGCTTTCCAGTCCCATTACCTGCCAGTGGATTCAGTTTCTCTCAGCAACCCATTCTGGAACTCTTCTTCTGGTTATTTTAGATTGGACCTTAAAGTCTTCCCATCTCAAAGTGACCGTTTCAACAGAACCGGAGTTGTAAGCATTTCGTTTGTGCTCTCCAACCAGATCTATAAAGCTCCAGGATTTTTCACCCCATACTATTTTTCTAGTAGCGGTAGCTATGATTTCTCCGCAGAAAAGTCTTCATCAAGTAAAATCAGTACGGGGGTTATAGCTGGTGCAGTAGCAGCAGGTGTTGTCATTTTGGTACTGGCCATCATTGCAATATTTGCAATCCTCCAGAAGAAAAGAACAAAGGCATTTAATCCTTTTGCTAACTGGGAACAGAACAATAATAGTGGCAATGCTCCTCAGCTAAAAGGAGCGCGCTGGTTTTCGTTTGAAGAGCTCAAGAAATATAGCAACAACTTTTCTGACGCCAATACTATCGGATCTGGGGGCTATGGAAAGGTTTACCAAGCTGTACTTGCCTCTGGGGAACTGGTCGCTATCAAGCGTGCTTCACAAGAATCGATTCAGGGTGCTGTTGAGTTCAAAACTGAGATTGAGCTTCTATCAAGGGTCCATCACAAGAATCTTGTGGGTCTTGTGGGTTTCTGTTATGATAAAGGTGAACAAATGCTGGTATATGAGTATGTTCCTAATGGCACTATATTGGACAGTCTTTCAGGAAAATCTGGAATTAGAATGAACTGGATAAGGAGGCTAAAAGTAACTGTGGGAGCAGCCAGAGGGCTAGCCTATCTTCATGAACTTGCAGATCCACCAATCATACACAGGGACATAAAATCAAGTAATATCCTACTTGATGACCATCTAAATGCAAAAGTTGCTGATTTTGGTCTCTCCAAACTTAAGGATAGTGACAGGGGCCATATCACAACTCAAGTCAAAGGCACAATGGGGTATATGGATCCTGAATACTACATGACTCAGCGGTTAACAGAAAAGAGCGATGTATATAGCTTTGGAATTACAATGCTTGAGCTGGTAACAGCAAGGAAGCCAATAGAGCAAGGAAGGTTCATTGTAAGAGAGGTTCTAAGAATAATGGATAGATCAAAAGAGTTGTACAATCTTCATGCCCTTATAGATCCAATGATAAAGCAAGAAGGAAACCCAAAAGGCTTAGAGAAATTTGTGGACTTAGCATTGAATTGTGTCAAAGATCATGCAGAAGAGAGACCAACAATGGCTGATGTTGTGAAAGAGATTGAGAATATACTGCAACTTGCCGGTTTCAACCCCAATGCTGAATCAACATCAACATCAGAAACTTATGAAAATGCCAGTGGTGGGAAGATTTACCATCCTTATGTCGATGAAGATTTCGCCTACTCGAGCGTTTTTCCACCGGCAAAGGTGGAACCTCAGTAA 2850 0.4137 MDQRNTEILLPLLLLFQVLLIAAQNSNQDFTALSSLAEFWENKPPSWVGTDPCGGGWEGIECAKSRVTSIKLLSMNLKGSLTEAIGRLTELMTLDLSYNKGMSGRIPAEIGNLSKLQTLSLVGCDFFGAIPESIGALNQLTFLALNLNRLSGPIPRTFGNLSNVNWLDIADNQIEGPIPISDEQGPGLDMLLKTEHFHFGNNLLFGQVQPKLFSSNMILKHLLLDNNNLSGSIPDTMGLVKTLAVIRYDHNHMTGDVPSSISNLTKLADLNLGNNKLSGSMPDLTGLNSLATVDLSNNSFNSSSIPSWASSLPYLTTLTLENTGRQGKIPTSLFSQLNIETVIMRNNQLNGTLDVSSYTPNLGLVDLGTNKITDFAQKSQKITFNVTLVGNPICLETGADSQSYCTNSQNSVTYSTVPNNCIPPPCSSNMVSSPNCKCAFPYTGVLTSRAPGFSNFGNRSYFKDLEHGLLAAFQSHYLPVDSVSLSNPFWNSSSGYFRLDLKVFPSQSDRFNRTGVVSISFVLSNQIYKAPGFFTPYYFSSSGSYDFSAEKSSSSKISTGVIAGAVAAGVVILVLAIIAIFAILQKKRTKAFNPFANWEQNNNSGNAPQLKGARWFSFEELKKYSNNFSDANTIGSGGYGKVYQAVLASGELVAIKRASQESIQGAVEFKTEIELLSRVHHKNLVGLVGFCYDKGEQMLVYEYVPNGTILDSLSGKSGIRMNWIRRLKVTVGAARGLAYLHELADPPIIHRDIKSSNILLDDHLNAKVADFGLSKLKDSDRGHITTQVKGTMGYMDPEYYMTQRLTEKSDVYSFGITMLELVTARKPIEQGRFIVREVLRIMDRSKELYNLHALIDPMIKQEGNPKGLEKFVDLALNCVKDHAEERPTMADVVKEIENILQLAGFNPNAESTSTSETYENASGGKIYHPYVDEDFAYSSVFPPAKVEPQ 949
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g1217 949 Gene3D Transferase(Phosphotransferase) domain 1 704 920 - -
Alju04g1217 949 CDD STKc_IRAK 634 899 - -
Alju04g1217 949 ProSitePatterns Protein kinases ATP-binding region signature. 634 656 IPR017441 GO:0005524
Alju04g1217 949 ProSiteProfiles Protein kinase domain profile. 628 900 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g1217 949 FunFam Leucine-rich repeat family protein 28 183 - -
Alju04g1217 949 SUPERFAMILY L domain-like 44 377 - -
Alju04g1217 949 Gene3D Ribonuclease Inhibitor 19 183 IPR032675 -
Alju04g1217 949 ProSiteProfiles Leucine-rich repeat profile. 266 288 IPR001611 GO:0005515
Alju04g1217 949 Gene3D Phosphorylase Kinase; domain 1 598 703 - -
Alju04g1217 949 Pfam Protein kinase domain 629 894 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g1217 949 PANTHER RECEPTOR-LIKE PROTEIN 55 38 899 - -
Alju04g1217 949 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 704 913 - -
Alju04g1217 949 SMART serkin_6 628 900 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g1217 949 SUPERFAMILY Protein kinase-like (PK-like) 611 903 IPR011009 -
Alju04g1217 949 Gene3D Ribonuclease Inhibitor 184 420 IPR032675 -
Alju04g1217 949 ProSitePatterns Serine/Threonine protein kinases active-site signature. 748 760 IPR008271 GO:0004672|GO:0006468
Alju04g1217 949 FunFam Leucine-rich repeat protein kinase family protein 184 283 - -
Alju04g1217 949 FunFam Leucine-rich repeat protein kinase family protein 595 703 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g1217 Alju-ChrAlju04 21506007 21514328 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g1217 1 949 Receptor kinase-like Gene Family AT5G49760 52.192 0.0 939
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Alju04g1217 Pkinase 5.2e-48 CL0016