Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g1197 ATGACTATTCCTGAAGCACTTTCACGATTTTGGCTATTCTTTCTTCTGCTCATCTCTTCTTTTTTCTTTCATTCCTATGGAGATAATTACACCAAAGTTGTACGCATTGGCGCAATTATTGATGTTAACTCTCGTATCGGTAAAGAACAGAAAATAGCCATGGAAATTGGAGCTCAAAAATATAACAACACATCAAAGACTCACAAGCTGGCTTTTTATTTCAGGAACGCCTCTGAGGAAGCCTCCAGAGTCGTCTCTCTTGCTGAAGAGTTGATTGAAATGCAGAAAGTAGAAGTCATTATAGGGATGCGTACATGGCAAGAAGCAGCTCTAGTGGCTGAAGTTGGAAGCCAAGCTCAAGTTCCAATCATATCCTTTGTATCACCAGCAATAACCCCACCTTTGACACAAAAACGCTGGCCTTATCTGGTTAGACTAGCTAACAATGTCACTGCACATGTAAAATGCATTGCAGATATAGTGAATGCTTTTAGTTGGCAAAGAGTAGTAGTAGTTTATGAAGAAGATGGCTATGTTGGTGGAGACTATGGGATGCTCTCTCTCCTTTCTGAGGCTCTTCAAGACTTTGGTTCACTAATTGAACACCGTTTAGCGCTTCCATCAATTTCTTTTCTGCCGAATCCAGGAGAGATAATTAATGAAGAGCTAAAGAAGTTGGTAAACAAAACTCAATCTCGTGTTTTCATTGTTTTGCACTCATCCTTAGAAATGGTGACCCATTTGTTCAGAGAAGGTTCAAAGATGGGACTTGTGGCTAAAGATTCAGCTTGGATAATCTCAGAGAGCATAACTAATTTGCTTGACTCTGTGGATAAGTCTGTCATTTCCTCCTATATGGAAGGGTCTTTAGGAATCAAGATGCATTACTCAGAAAAAAGCAGTGAGTATCAAGATTTTCAAGCTCAGTTCCGGAAAAAATTTCGTGCAAAGAATCCTGAGGAAGACAATAGCAACCCAGGATTTTATGCTTTGCAAGCATATGATAGCATCAAAGTTGTCATTCAAGCAGTAGAAAGAATGGCAAGGGACACAAGTAGCAGCCCACAAGCTTTGCTAAGAGAAATATTGTCTAGCAGTTTCAATGGTTTGAGTGGCGAAATCCATTTTCAAGCAGGTCAGCTCTTGCAGAATCCTATCCTTAGGATGGTTAATGTAGTTGGCAAGAGTTATAAAGAAATAGACTTTTGGACTCAAGAAAATGGATTCACCATGAGCCTGCCTACAGGAAAAAGTGAAGAAAATGTTACTGCTAACACACAAAGTTTGGTTGGTGTAGTACAATGGCCAGGAAATTTAGAGAGAACTCCTAAAGGTTGGAATATGCCTGTTAAGCGAAACCCAATGAAAATTGCAGTTCCAGGAAGAACTTCATTTTCAAAGTTTGTCAAGGTTGAATATGGAAAAAGTCCAGATCAGAATCAATATAAAGGATTCTGTATCGAGGTATTCAACAAGGTGCTTGAGCTTTTGGGATATGATCTACCCTATGAGCTTCATCCCCTCAACGTAACTTATCCTGATCTGGTTCAACTCGTGTATAACAAGACTTATGATGCAGTGGTTGGTGACATGACCCTACTAGCAGAGAGACTGCAATATGTAGATTTTACTGTGCCATATGCAGAATCAGGATTGTCCATGGTAGTTCCAGTGAAGTCTCAAGAGTCAAAATGGATGTTTCTAAAGCCATTCACCAGGCAAATGTGGGCAGTAATTGGTGCAATCATGATTTACACTGTGTTAGTAGTTTGGTACCTTGAACGAGTACCCAATCCAGAGTTTCAAGGCAATTGGAAGAGACAATTCAGCACTGCTCTTTGGTTTACCTTCTCCTCCCTATTCTTTGCACATAGGGAGCAAGTGCAGAGCAACTTGTCTCGTGTGGTGATGGCAGTGTGGCTTCTTCTAGTTATGGTTCTGAGTTCAAGCTACACAGCTAGCCTTTCTTCAATGCTAACAGTTCAACAACTGCAGCCAAACGTCACAAGCATCGACTGGCTGAAGATGAACAACATGAAAATTGGTTGTGATGGTGACTCATTTGTTAGGACATACCTAGAGAAAGTCGAAAAGTTCAAGCCAGAAAACATCATCAACATAAATAGTGAATACAATTATGATGGTGTATTCAAAAACAAGTCAATAACAGCAGCTTTTCTCGAACTCCCTTATGAAAAAGCATACCTAAGTACTTACTGCAAGGGATATTCTGGCTCCACACCAACCACCAGATTTGGAGGCCTAGGCTTTATGTTCCAAAAAGGCTCCCCAATGGCCAGAGATTTTTCTAAAGCAATATTGCAGCTTTCAGAGAAGGGAGAACTAACCAACTTGGAAGCACAATCGTTATATCACTCAAACGAGTGCACCAACAACTCAAGCTCCAACGATAAACAAAGTCTGAAGCTTGAAAGTTTCTGGGTTCTCTTTGTCATTTCTGGGGTCACATCTACTATCTGTTTACTATTTTCTATCATTCAGTCGCAAGGATTTTGTCAGCTAACTCAAAATATGACTCAAGAAGGCAATGGACTCACAAGTAATATGACAGCTTGGATAAGAACACTTGAATTAGCTAAGCGGATTTATAGCAAAAAACTTACTCAGGAAACTGATTTGTACGGGCCTAATATTGGGACATAA 2664 0.4005 MTIPEALSRFWLFFLLLISSFFFHSYGDNYTKVVRIGAIIDVNSRIGKEQKIAMEIGAQKYNNTSKTHKLAFYFRNASEEASRVVSLAEELIEMQKVEVIIGMRTWQEAALVAEVGSQAQVPIISFVSPAITPPLTQKRWPYLVRLANNVTAHVKCIADIVNAFSWQRVVVVYEEDGYVGGDYGMLSLLSEALQDFGSLIEHRLALPSISFLPNPGEIINEELKKLVNKTQSRVFIVLHSSLEMVTHLFREGSKMGLVAKDSAWIISESITNLLDSVDKSVISSYMEGSLGIKMHYSEKSSEYQDFQAQFRKKFRAKNPEEDNSNPGFYALQAYDSIKVVIQAVERMARDTSSSPQALLREILSSSFNGLSGEIHFQAGQLLQNPILRMVNVVGKSYKEIDFWTQENGFTMSLPTGKSEENVTANTQSLVGVVQWPGNLERTPKGWNMPVKRNPMKIAVPGRTSFSKFVKVEYGKSPDQNQYKGFCIEVFNKVLELLGYDLPYELHPLNVTYPDLVQLVYNKTYDAVVGDMTLLAERLQYVDFTVPYAESGLSMVVPVKSQESKWMFLKPFTRQMWAVIGAIMIYTVLVVWYLERVPNPEFQGNWKRQFSTALWFTFSSLFFAHREQVQSNLSRVVMAVWLLLVMVLSSSYTASLSSMLTVQQLQPNVTSIDWLKMNNMKIGCDGDSFVRTYLEKVEKFKPENIININSEYNYDGVFKNKSITAAFLELPYEKAYLSTYCKGYSGSTPTTRFGGLGFMFQKGSPMARDFSKAILQLSEKGELTNLEAQSLYHSNECTNNSSSNDKQSLKLESFWVLFVISGVTSTICLLFSIIQSQGFCQLTQNMTQEGNGLTSNMTAWIRTLELAKRIYSKKLTQETDLYGPNIGT 887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g1197 887 SUPERFAMILY Periplasmic binding protein-like II 430 786 - -
Alju04g1197 887 Gene3D - 564 704 - -
Alju04g1197 887 Gene3D - 149 407 - -
Alju04g1197 887 FunFam Glutamate receptor 153 324 - -
Alju04g1197 887 Pfam Receptor family ligand binding region 62 392 IPR001828 -
Alju04g1197 887 FunFam Glutamate receptor 564 702 - -
Alju04g1197 887 CDD GluR_Plant 453 786 - -
Alju04g1197 887 SMART GluR_14 456 792 IPR001320 GO:0015276|GO:0016020
Alju04g1197 887 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 34 833 IPR015683 -
Alju04g1197 887 Pfam Ligand-gated ion channel 788 822 IPR001320 GO:0015276|GO:0016020
Alju04g1197 887 CDD PBP1_GABAb_receptor_plant 35 413 IPR044440 -
Alju04g1197 887 Gene3D - 454 563 - -
Alju04g1197 887 Gene3D - 36 383 - -
Alju04g1197 887 PIRSF IGluLR_plant 5 880 IPR017103 -
Alju04g1197 887 Pfam Bacterial extracellular solute-binding proteins, family 3 479 787 IPR001638 -
Alju04g1197 887 SUPERFAMILY Periplasmic binding protein-like I 32 446 IPR028082 -
Alju04g1197 887 FunFam Glutamate receptor 450 565 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g1197 Alju-ChrAlju04 20927791 20931831 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g1197 10 829 Ion Channels AT2G29120 32.943 4.45e-144 449