Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g1191 ATGAATTCAGATCGAAGCCTTTTGCCTCTTGTGGCCGCGTTCAGTTCCATTATTATCCTTCTCATCTATTGCTTCCCAGGGGCTTCAGCAGATAACAGTAATAATGGAATCAATATTGATGTTGGCGCAATTATTGATTTCAATTCTCAAGTTGGAAAACAACAGAAAGAAGCCATGGAAATTGCAGCTCAAAGCTTTAACAACTATTCAAACAAAAGCCTCAACATATCCCTCCATTTCCGTGACTCTCTAAGAAATCCATTACAGGCAGCTTCTGCTGCTGAACAACTAATAAATGAAACAAAAGTTAAAGCTATCATTGGAATGTCCACATGGAAGGAAGCAGCTTTTGTAGCTGAACTTGGAGATAAAGCTCAAGTTCCTGTAATTTCATTCTCATCTCCTTCAATATCCTCACCGCCTTCATCAATCCCATTTCGTTGGCCTTTCTTGATTCAAATGGCCAAGAACCAGACAGTTAATATAAATTGCATAGCTGATATTGTTCATGCATATGGCTGGCAAAAAGTTATAGCCATATATGAAGATGATTCTTATAGTACTGATTCTTCAGGAATGTTAGCCCTCCTTTCGGAAGCCCTCTTGAAGACTAATTCTCAAATTGAGCGTAGACTTGTCCTCCCTCCATTTTCTTCTTTATCTGATCCAAAAGGGTTTGTTCTTGACGAACTTATTGAGCTATTATTATCAGCAAAATCTAGGGTTTTCATTATTCTCAAAGCATCATTACCGATGATTACTCATTTATTTAGAGAAGCTATGAAACTAGGGTTCTTAGGGAAAAACTCAGTTTGGATTGTTAATGAAGATATTGCTGGCTTGTTGGACTCAGTCAATGAGACTGTCTTGTCCTCCATGGAAGGAATTATTGGAATCAAAAGCTATTATTCTACTACTTCAAGTGATTATACTCAGTTCATAGAAAAATTGCAAAACCAGTCTCACACATCGGCAGCATTCTATGCAATGCAAGCTTATGATAGCATCACGACCGTCGCAAAAGCCCTACAGAAGATGAATGGTACTAATAACTCGAGATTGTTCTTGAAGACAATGCTGTCTAGTAACTTCACTGGTTTAACTGGTGACATAAGGTTCAAGGAAGGCCATTTATCACAAACTCCATTGTTAAGAGTGATAAACGTGGTTAACAAGAAATACAAAGAATTGGATTTCTGGGTACCAAATTTGAAGTTCTTTAAATCTCTGCAAGACATAGAGAAAGGAAGTGATGCTGCTAGAAATAATCTTAATGGTCCAGTGGTTTGGCCTGGAGGTCTAAAGACTCTAAACAATGATGATAATGTTCCATTAGGATGGAACACACCTTCAGAAAAAAATCCTTTAAAAGTAAGAGTTCCTTTAAAGCCTGCTTTTGAGAATTTTGTGAAGGAAGAATCTCAAGGCAAATATGTTGGTCTGTGTATTGAAATTTTTGAAAACATTCAAGAACAGCTCAAAGATAAATACTCTGGTCTGCCATATGAATATCATCCCTTTGATGATGTATCTTATGATGTGGTTCTACAAAATTTCGCCGACCAGGAGTATGATGCTATTGTTGGAGATGTAACAATACTTGAGGCTCGATTAAAGAATGTGTCGTTCACACAACCATATTCAGAGTCAGGTTTATCACTCATATTTCCAGCTGAGAGAGAGGGCACGACATTTCTGTTCGTGAAGCCATTTAGTTGGCAAATGTGGCTAGCCACTGGTATCATCTTCTTCTACACAACGCTTGCTATCTGGTTTCTTGAGCATCCCTTAAACCCTGGCTTTAAAGGATCATGGAAAAATCAACTCAGCAACACTTCTTGGTTCGCCTTTTCTTCCCTATTCTTCGCTCACGGGGGTAAAGTGTACAGTAACTCAGCAAGAGTGGTGGTTGCTGTATGGCTATTTCTGGTGTTCGTTCTGACTTCAAGCTACACTGCAAGTTTGTCTTCTCTGCTCACTGTGAAACGCATGAATACTGGGAGAGACGTTGAGTGGCTGAAGCAAAATAAGTTAACAGTTGGCTGTGATAATAGCAGTCAATTTGTTAGGAACTACTTGCTCCATGTCTATAATATACCTGAAGAGCAAATATTAAGTCTTGATGGTGAACCTGACTTTGTGGCCAAGTTTAAGAGCAAACAAATTTCTGCTCTCTTCCTTGAGAGCCCTTATGAAAAGGTTTTCTTAAACAAGTATTGCAATCAATATACTGCAACTCCTGCTGGCTATAGATTTGGAGGCCTAGGCTTTGTATTCCAAAGAGATTCTCCGTTGGTGAAAGACTTTTCTGAAGGGATTTTGAGGTTAGCAGAGAATGGAACTCTAAAGAGTTTGGAAGACAAATGGTTGACCCCTTCTTATAACTGCTCAAGCGACTCAACGTCGTCTTCTGAAGCTGAAAGCCTATCCATGGCCGACTTTTGGATTCTTTATGTGATAAGTGGTCTTACTTCCACCATCTTCTTGACCGTTGCTCTGTTCAGGACTTACCTTCATCAACAGAAAGAAGGAGATCAAGAAAATAATAATACAGAAGCTTCCGATAATAATGGTGTTTGGAACAAGGCACTTGTGAGACTCACTTCAGGGCTTTACAATATCGGCAGTTTCAATTTCAACACTATAGGAAGAGCTGCAACTTTTGGTGGAACAGGAACTGTTAGCCATTGGAATTCTTCGAGGTGGGAGAGTGTAAGAACGTCTGATGATCATGTTAATCCTCGACGGACCCAATCGGTTGGGTTAGAAATGTTATAG 2778 0.3924 MNSDRSLLPLVAAFSSIIILLIYCFPGASADNSNNGINIDVGAIIDFNSQVGKQQKEAMEIAAQSFNNYSNKSLNISLHFRDSLRNPLQAASAAEQLINETKVKAIIGMSTWKEAAFVAELGDKAQVPVISFSSPSISSPPSSIPFRWPFLIQMAKNQTVNINCIADIVHAYGWQKVIAIYEDDSYSTDSSGMLALLSEALLKTNSQIERRLVLPPFSSLSDPKGFVLDELIELLLSAKSRVFIILKASLPMITHLFREAMKLGFLGKNSVWIVNEDIAGLLDSVNETVLSSMEGIIGIKSYYSTTSSDYTQFIEKLQNQSHTSAAFYAMQAYDSITTVAKALQKMNGTNNSRLFLKTMLSSNFTGLTGDIRFKEGHLSQTPLLRVINVVNKKYKELDFWVPNLKFFKSLQDIEKGSDAARNNLNGPVVWPGGLKTLNNDDNVPLGWNTPSEKNPLKVRVPLKPAFENFVKEESQGKYVGLCIEIFENIQEQLKDKYSGLPYEYHPFDDVSYDVVLQNFADQEYDAIVGDVTILEARLKNVSFTQPYSESGLSLIFPAEREGTTFLFVKPFSWQMWLATGIIFFYTTLAIWFLEHPLNPGFKGSWKNQLSNTSWFAFSSLFFAHGGKVYSNSARVVVAVWLFLVFVLTSSYTASLSSLLTVKRMNTGRDVEWLKQNKLTVGCDNSSQFVRNYLLHVYNIPEEQILSLDGEPDFVAKFKSKQISALFLESPYEKVFLNKYCNQYTATPAGYRFGGLGFVFQRDSPLVKDFSEGILRLAENGTLKSLEDKWLTPSYNCSSDSTSSSEAESLSMADFWILYVISGLTSTIFLTVALFRTYLHQQKEGDQENNNTEASDNNGVWNKALVRLTSGLYNIGSFNFNTIGRAATFGGTGTVSHWNSSRWESVRTSDDHVNPRRTQSVGLEML 925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g1191 925 SMART GluR_14 457 792 IPR001320 GO:0015276|GO:0016020
Alju04g1191 925 Pfam Ligand-gated ion channel 792 822 IPR001320 GO:0015276|GO:0016020
Alju04g1191 925 CDD PBP1_GABAb_receptor_plant 40 410 IPR044440 -
Alju04g1191 925 SUPERFAMILY Periplasmic binding protein-like I 39 432 IPR028082 -
Alju04g1191 925 Gene3D - 564 696 - -
Alju04g1191 925 PIRSF IGluLR_plant 10 870 IPR017103 -
Alju04g1191 925 Gene3D - 157 400 - -
Alju04g1191 925 Pfam Receptor family ligand binding region 55 389 IPR001828 -
Alju04g1191 925 SUPERFAMILY Periplasmic binding protein-like II 446 792 - -
Alju04g1191 925 SMART AABind_6 457 793 IPR001638 -
Alju04g1191 925 Gene3D - 450 563 - -
Alju04g1191 925 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 40 851 IPR015683 -
Alju04g1191 925 FunFam Glutamate receptor 564 694 - -
Alju04g1191 925 Pfam Bacterial extracellular solute-binding proteins, family 3 466 791 IPR001638 -
Alju04g1191 925 FunFam Glutamate receptor 161 331 - -
Alju04g1191 925 Gene3D - 42 381 - -
Alju04g1191 925 Gene3D - 697 794 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g1191 Alju-ChrAlju04 20877529 20882651 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g1191 34 849 Ion Channels AT2G29120 31.671 3.72e-119 384