Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g1147 ATGCTGAGAGCGTTCTTTGCGAGGAAATCAAATTTACTTTTCACTTTAGTTCTTAGTTCTCTTCTTGGTAACCGAATAACGGGTGAAATTCCAGTGGAGCTAACGAAGATCACTACTTTGCAAACTGTGGAAGGGGACGGATTCGTGGCAGTCAATATTACATTTCGTAACACAGCTGGGCCAGAGAAGTACCAAGCAGTGGCAGTTCGAAACACAGCTAACATGTCTGTGTTTTATAGCTGCAGCTTGGAGGGATATCAAGACACGCTCTATGCGCATTCCAAAAGACAATTTTACAGAGAATGCAATATTTATGGCACGGTGGATTTCATATTCGGAAATGCAGCGGCAGTGTTCCAAAACTGCAATATTTATGTTCGTAAGCCCATGAGAGGACAATTCAATGCTATTACAGCCCAAGGTAGAGAGAGGCACGGGCAACATACGGGCTTCTCTTTACATAACTGCACAATCAGAGCGGCAGAGGATCTAGCGGGGGCGGCGACGTACCTAGGAAGGCCATGGAAACCACTGTCGAGGACAGTTTATATGGAGAGCTTCATGGATAACATCATACATGAGGCAGGCTGGCACGTGTGGGATAGTGATAAGGAGAGTGACTTGAACACTTTGTATTTTGCTGAGTATAAGAATTCTGGGCCGGGCTCCAACACCTCACATCGGGTCACTTGGAAGGGTTATCATGTCATTGACTCCTCCATTGCTTCTCAATTCACTGTCTCCAAGTTCTTGTCTGGGGATTCTTGGTTGCCCCTCACTGGCGTCCCTTACACTGCTCACTTGGTTTGA 810 0.4617 MLRAFFARKSNLLFTLVLSSLLGNRITGEIPVELTKITTLQTVEGDGFVAVNITFRNTAGPEKYQAVAVRNTANMSVFYSCSLEGYQDTLYAHSKRQFYRECNIYGTVDFIFGNAAAVFQNCNIYVRKPMRGQFNAITAQGRERHGQHTGFSLHNCTIRAAEDLAGAATYLGRPWKPLSRTVYMESFMDNIIHEAGWHVWDSDKESDLNTLYFAEYKNSGPGSNTSHRVTWKGYHVIDSSIASQFTVSKFLSGDSWLPLTGVPYTAHLV 269
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Alju04g1147 269 FunFam Pectinesterase 4 21 268 - -
Alju04g1147 269 SUPERFAMILY Pectin lyase-like 40 266 IPR011050 -
Alju04g1147 269 PANTHER PECTINESTERASE 25 258 - -
Alju04g1147 269 Pfam Pectinesterase 37 254 IPR000070 GO:0030599|GO:0042545
Alju04g1147 269 ProSitePatterns Pectinesterase signature 2. 104 113 IPR033131 -
Alju04g1147 269 Gene3D - 20 269 IPR012334 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Alju04g1147 Alju-ChrAlju04 19732295 19734752 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g1147 43 269 Carbohydrate Esterase AT4G02330 61.472 3.94e-104 312