Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g1120 ATGCCTTCTTCTTCTTCTTCTTGGACTGTATCTTCCATAAACCTTCGATTCTTCACTCGAATCAGACGTTTCCTTCAATCCAAATCTTCTCGTAAGCGCAACCACGGGTCCGATCAATTTCACCTATCAAAATCCAAATCAGAAAGCATCGAGAAGAAGAACGAGAAGGCAGAGGTTGAAAAGCCTGAAACGATCAAAGCTGTGCAGAAACAGAGTGAGAGTATTGAGGAGTGTTGTGAGATTTTGTTGCAGAGGTCTGTGAAGAAGCTTCACTTTGGTGATTGGGAGGAGAAGGAGATTGCAGCGAAAGAGATTGAAACTATGGCCAAACGCGATGTCAACGCTCGCAAGTTGTTTATGGAGCTCGGCGTCGTGCCGGTGCTCGTCTCTATGGTGGCCTCCGATGTATCCAGCAGCCGGAGTTCTGCCGTCACGGCGTTAATTCAGCTCGCAGATGGAAGCTTCACGAACAAGGCCATGATAGTGGAGGCAGGAATATTATCCAAGTTACCTAAGAGGATTGACCTTACGAACGAAACAAGTCAAATTGCAGAATTGCTTCTGTCATTATCATCTTTAGCAACCACACAATGCCCTTTTGCATCACTTGACTTTATCCCATTTCTCAGAGACATTCTTCAGTCAAACTCAACCTTTGACACAAAACAGTTATGCCTAGGAGCCATATACAATATCTCAGCTGTATTAGAAAATGCAGGGCCTTTGGTTTCTAGTGGGTTTGTCCCTATTCTTATAGAACTTTCCACAGAGAAACAAGTTTCAGAGAAGGCACTGGCGTCTCTCGGTAACTTAATTGTTACCTTGATGGGGAAGAAAGCAGTGGAAGAAAGCTCAATGGTACCAGAAAGCCTGATAGAGATTTTGTCATGGGAAGATAAGCCAAAATGTCAAGAGATTTCTGTTTATATTTTGATGATTCTTGCTCATCAAAGCTCATCACAGAGACAGAAAATGGCAAAAGCAGGGATTGTTCATGTGCTGCTTGAAGTTGTTTTATTGGGAAGCAGTTTGGCTCAGAAGCGAGCTTCAAAACTTTTGCAGTGGTTTAAAAATGAGAGGCAAGTGAGGATGGGCCCACACTCGGGCCCACAAACATCAATATCAGCCATGTCCATGGGTTCACCTATGAATCAAATGGAAGCAAGAGAAGGGAAGAGAATGATGAAGAGTTTGGTCAAAGAGAGTTTATATAGGAATATGGAAACAATTACAGAGAGGGCAAATATTGCTGCTGCTGCAGAATCTTCTTCTAAGTTCAAGTCTTTAATAATCAGTACAAGTTCCAAGAGTTTGCCTTACTGA 1323 0.4286 MPSSSSSWTVSSINLRFFTRIRRFLQSKSSRKRNHGSDQFHLSKSKSESIEKKNEKAEVEKPETIKAVQKQSESIEECCEILLQRSVKKLHFGDWEEKEIAAKEIETMAKRDVNARKLFMELGVVPVLVSMVASDVSSSRSSAVTALIQLADGSFTNKAMIVEAGILSKLPKRIDLTNETSQIAELLLSLSSLATTQCPFASLDFIPFLRDILQSNSTFDTKQLCLGAIYNISAVLENAGPLVSSGFVPILIELSTEKQVSEKALASLGNLIVTLMGKKAVEESSMVPESLIEILSWEDKPKCQEISVYILMILAHQSSSQRQKMAKAGIVHVLLEVVLLGSSLAQKRASKLLQWFKNERQVRMGPHSGPQTSISAMSMGSPMNQMEAREGKRMMKSLVKESLYRNMETITERANIAAAAESSSKFKSLIISTSSKSLPY 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g1120 440 SUPERFAMILY ARM repeat 87 354 IPR016024 -
Alju04g1120 440 Gene3D - 66 402 IPR011989 -
Alju04g1120 440 MobiDBLite consensus disorder prediction 31 60 - -
Alju04g1120 440 MobiDBLite consensus disorder prediction 28 60 - -
Alju04g1120 440 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 5 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g1120 Alju-ChrAlju04 18964154 18968150 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g1120 96 383 U-box Gene Family AT1G67530 28.763 6.45e-19 87.8