Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g1103 ATGTCGTTCTTCTCTGACGCTGATCCCTTCCATCACCAGCCCGCATCAGTTCCAGCGTCGAGCAACTCATTCAGAAATGCTGGATCAACTGCTTCCACTATTATTCTGGTTGGTGACCGTTTGCTTGTTGCAAATGTTGGGGACTCCAGAGCTGTTATATGCAGGGGTGGTAGTGGAACTTGGAGAGTTGGTGGTATTCTTGTTGTTTCTCGGGCATTTGGGGATAGACTCCTGAAGCAGTATGTTATTGCTGATCCAGAAATCCAGCTTCTTTGTTCATTGCTTGTTGCTGGAGGGGTATTGACATTTGCACTTTTAAAGGTCAGGAACTATTTAGAAAAGCATGGCAAAACATTTTAG 360 0.45 MSFFSDADPFHHQPASVPASSNSFRNAGSTASTIILVGDRLLVANVGDSRAVICRGGSGTWRVGGILVVSRAFGDRLLKQYVIADPEIQLLCSLLVAGGVLTFALLKVRNYLEKHGKTF 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g1103 119 SUPERFAMILY PP2C-like 22 90 IPR036457 -
Alju04g1103 119 CDD PP2Cc 20 93 IPR001932 -
Alju04g1103 119 Pfam Protein phosphatase 2C 23 58 IPR001932 -
Alju04g1103 119 Pfam Protein phosphatase 2C 59 89 IPR001932 -
Alju04g1103 119 Gene3D - 5 60 IPR036457 -
Alju04g1103 119 Gene3D - 61 91 IPR036457 -
Alju04g1103 119 MobiDBLite consensus disorder prediction 1 23 - -
Alju04g1103 119 ProSiteProfiles PPM-type phosphatase domain profile. 1 119 IPR001932 -
Alju04g1103 119 PANTHER PROTEIN PHOSPHATASE 26 55 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g1103 Alju-ChrAlju04 18801020 18803776 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g1103 3 89 PP2C-type Phosphatase Gene Family AT5G24940 55.738 5.80e-33 117