Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g1060 ATGGATCAGACTTGGCGGTGTGATCTGCTAAACATGTCAGAAGACGAACACGAGATTTATAATGACAAAGATAAATGTGAGGAAACTTCTTTGGGGTCTTCTTCTCAGAAATGTTCGTCGTTCGACTTGAATGAGGAAGCTACCAGTGAAGAAGAAGAAGATGAGCAAGAACAAGAGGAGGAGGAGGAAGAGGAAGAAGAGGAGGAGAAGGAGAAAATAGTAATGAGGGAACATGAAGGAACTTCATCATCAAACAGAAGCACATCTAGAGAACGAAATAATAATGAAGGGAAAAACACAGTGAGACAATATGTGAGATCCAAGACGCCTAGGCTTCGTTGGACTCCAGATCTTCATCTCTCTTTTGTTCATGCTGTTAAACGCCTTGGTGGTCAAGAGAGAGCAACACCCAAGTTGGTGCTTCAGCTAATGAATGTGAGAGGACTCAGCATTGCTCATGTGAAGAGTCATTTGCAGATGTATCGGAGTAAAAAACTTGATGAGGCTGGCCAAGATACTAATAATAATATTATGAATGATTCATCACAATCTGGATTTCACCAACTTGGCACCATGCATGCACCTGTGGTGCCACCTGATGAACCATGGAGTTTTGTAAATTTAAACAGTAGCAGCAACAGTTCGAAGCTAGAATTTGAGCCCCCATTTCGGATTAAGTTAAATGAAGAGAAAGAGGAGAAAGACGAGCGATCGTTGCCTAATCTGCAACTGGGATTGAATTATCAGACTGCTGATCATTGCAAGGACACCCAAGAAATTAACACTAAGCTTTCCCTTTCTTAG 804 0.4167 MDQTWRCDLLNMSEDEHEIYNDKDKCEETSLGSSSQKCSSFDLNEEATSEEEEDEQEQEEEEEEEEEEEKEKIVMREHEGTSSSNRSTSRERNNNEGKNTVRQYVRSKTPRLRWTPDLHLSFVHAVKRLGGQERATPKLVLQLMNVRGLSIAHVKSHLQMYRSKKLDEAGQDTNNNIMNDSSQSGFHQLGTMHAPVVPPDEPWSFVNLNSSSNSSKLEFEPPFRIKLNEEKEEKDERSLPNLQLGLNYQTADHCKDTQEINTKLSLS 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g1060 267 Coils Coil 44 77 - -
Alju04g1060 267 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 106 166 IPR017930 -
Alju04g1060 267 MobiDBLite consensus disorder prediction 71 97 - -
Alju04g1060 267 SUPERFAMILY Homeodomain-like 107 164 IPR009057 -
Alju04g1060 267 FunFam Myb family transcription factor 108 166 - -
Alju04g1060 267 MobiDBLite consensus disorder prediction 45 70 - -
Alju04g1060 267 NCBIfam myb-like DNA-binding domain, SHAQKYF class 110 165 IPR006447 GO:0003677
Alju04g1060 267 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 89 207 IPR046955 GO:0003700
Alju04g1060 267 Pfam Myb-like DNA-binding domain 112 162 IPR001005 -
Alju04g1060 267 MobiDBLite consensus disorder prediction 26 104 - -
Alju04g1060 267 Gene3D - 109 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g1060 Alju-ChrAlju04 16379097 16384303 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g1060 99 178 G2-like Transcription Factor Family AT2G42660 71.250 6.28e-36 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Alju04g1060 Myb_DNA-binding 4.3e-07 CL0123