Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g1059 ATGGCGATTCGAGTGGAAGCACCACCGTCCTTTGGCTTTCCCACTAAAACTAAGTATAGATTCGATGTTTTCCTGAGTTTTAGAGGCGTAGATACTCGCCACACCTTCACTGTTCCTCTCTATGATGCTCTGCGACGTAAGGGAATCAAGGCCTTCATTGATGACAAGAAGCTTGGGAAGGGGGAAGAGATCTCACCTACACTTCTTAAAGCCATTGAGAGATCAAGGATTTCGATTATTGTGTTCTCTAAGAACTATGCTACTTCCACGTGGTGCCTAGAGGAACTTGCCCACATCATTTGGTGTAAGAAGCAGAAGAACCAGATGGTTATGCCTATCTTTTACAAGGTGGATCCGTCGGATGTTCAATATCAGAGAAATAGCTTTCTGGAAGCCATGGCTGCTCTTGAAGATAGGTTCAGAAATGACTTAGACAAAGTGTGCAAATGGAGGTCTGCTTTGTCTGAAGCTGCTAGCTTATCATCTGCATGGCTTTTTGATGATGGATGCAAATTTGGGTTTATCAAAAGGATTGTGGAAGATGCATATGCTATGCTACCACCAAATCCTTTACATAGTATTGATCACACAGTTGGACTTGAGTCTCGCATTGAAGAAGTGAAGTCACTTTTGGATCAGTCCCATAATGGTGTTTGTATGTTGGGGATTCATGGAACTGGTGGAATTGGCAAAACAACACTTGCCCAGGCCCTATATAATTCAATGTTTTACCAGTTTGAAGGCGCATGTTTTCTATGTGATGTCAGAGAAGCGTCAAAGGAATATCGAGGCATAGTTCGTCTCCAACAATCACTTTTATCTAAGATTCTTGAAGAGAAGAGTAAGAAGTTCTGTAGTATTGGTGAAGGAATAAGTAAAATAAAACACAGACTCTCCCACAAAAGAGTTCTATTAGTGCTTGATGATGTTGATGAGGTAGAACAACTAGAACAACTAGCAGGAGGGTGTAACTGGTTTGGATCTGGAAGCAAGATCATTATAACTACGAGAAATAAGCAATTATTATTTGCGCATGGTGTTCAAGAAACTTATGAAATGAAAGAGCTAAATGAGCATGAGTCTCTTGAGCTGTTTTGTTGGCATGCTTTTCGCATGAGGCAGCCTCCAAAACCCTATGAAGATATGTCTATTCATGTGATCAATTATGCACAGGGCCTTCCTTTGGCTCTAAGAGTAATAGGCTCCAATTTGACTCATAAAAACTTAGAGGAATGGAGGTCAATATTGGAACGATATGAGCAGATTCCAGATAAGAAAATTCATGAGGTGCTAAAGATAAGTTATGATTACTTACAAGACAATGCTAAGTCTATTTTTCTAGATGTTGCATGTTTCTTGAAGAAGTGGAGATTAGTATATGCCAATGAAATACTACACGCATGTCATGGTGGCGCGATGTTTTATATTGAAGTGCTCATTGATAAGTCATTGGTGAGCATTGATAAACATGATTGCTTGTGGATGCATGATCTAATACAAGAAATGGGTCAAGAAATTGTTAGACAGGAGGCACCAACAAACCCTTGTGAACGCAGCAGATTATGGCATCATGAAGATGTTCTTAGAGTATTGCATGAAAATTCTGGAAGCAGCAAAATTGAAGGAATAATGCTTAAATCTCCTCAACAAGAGGTAGCATGGAGTGGCTTAGCCTTTGAGAAGATGAACAATCTTAGGATACTCATTATACGAAATGCACTCTTTTCAACCGGCCCCAGGCACTTTCCAAACAATTTAAGATTGCTTTATTGGGAGGGATGCCCTTCTGTGACCTTACCTGAGGATTTTTATCCTGAGAACATTGTAGTCCTTAGGTTATGTCGTAGTTATATCCGATTGGTAGAGCCAATCAAGAGGTTAGAATATTTGACACACATGCTTTTCTCAGAATGTGAATTTATAACTGAAGTACCTAATATGTCTCAAGCCCCAAATTTGAAAGAACTGATAGTTGTAGACTGTTGCAATTTGATCAAGGTTCATGATTCTGTGGGATCTCTCTCTAAGTTAGAGGTATTAAAGGTTAATGGCTGCAGAAAACTTAAAAGCTTTCCTCATGAAATCAAGTTGGCGTCTCTTGAACACCTTGACCTCTCTTTTTGTGAGAGTCTTGTTTACTTCCCAAATATTTTGGGAAAGATGGATGCATTGAGCACCATTTTTGCAGATAACACTGCCATTGAAGAACTCCCACATTCCATTGGAAATCTTTCAGGGCTTCAAGTTTTATCTCTTAACTCCTGCAGTAGTCTTGGGGAGCTTCCAGACAAAATATTTATGCTGGAAAATCTTGTCTGGCTTTTATTGGGAGAAAGTAAACCTCATAGCAGAAAATCCTTGAAGAAGTCAATGCAAGATAGCCACCCAATTATTAGAAGCACAAACTTAAAGATCGTGAATCTTGAAAATTGTGGTATATTGGATGAAGATCTTCACCTGACTATGAATTGTTTTCGGAATTTGCAAGAATTAAATTTATCAGGGAATGATATTGTGTCCCTTCCAGAGTACATAAAAGAGTGTGCTTATTTGGAGAAACTAGAACTGAGTGACTGCAAGAGGCTAAGAGACATTCCGGAGCTGCCATCAACCCTGGAGGAGATAGTAGCAGACAATTGCATATCGTTAACAAGAAAGTCCTTAAGCCATTTATGGTCTCAGGCAAGAAAGGAAATGTGCCATTTGCTAATCAGTATGCCAGCATCAACATTTCCAGATTGGCTCAACTTTTGCTGGAAAGGAGAGACCTTGTCTTTTCGTGTTCGTGGGAATTTCCCAGTGTTTGCCTTAGCATTTGAGGTTGATAAAGCAGGCGCGAGTGTCGGATTAAGGCCTGGAAGGGAACTTGAAATCCCTGTTTCTCATCAGACACTCCGTGGTCGAATGAGCATCAATGGTCATGAAGTATCAAAGCTAGGAGATAATATAATCCTTCCAAGCATCGAAGGTCATGTGTGTGTAACTGATATAAGACGAGCTTTTCTGGACAAAGAATACTGTAAGGGCTTAGATAGGTTTCTGGAATTGGATTGGAATGATGTGGAAATAGAAGCCAAATTCTTCTTTGCTTTCTACCAATGA 3102 0.3981 MAIRVEAPPSFGFPTKTKYRFDVFLSFRGVDTRHTFTVPLYDALRRKGIKAFIDDKKLGKGEEISPTLLKAIERSRISIIVFSKNYATSTWCLEELAHIIWCKKQKNQMVMPIFYKVDPSDVQYQRNSFLEAMAALEDRFRNDLDKVCKWRSALSEAASLSSAWLFDDGCKFGFIKRIVEDAYAMLPPNPLHSIDHTVGLESRIEEVKSLLDQSHNGVCMLGIHGTGGIGKTTLAQALYNSMFYQFEGACFLCDVREASKEYRGIVRLQQSLLSKILEEKSKKFCSIGEGISKIKHRLSHKRVLLVLDDVDEVEQLEQLAGGCNWFGSGSKIIITTRNKQLLFAHGVQETYEMKELNEHESLELFCWHAFRMRQPPKPYEDMSIHVINYAQGLPLALRVIGSNLTHKNLEEWRSILERYEQIPDKKIHEVLKISYDYLQDNAKSIFLDVACFLKKWRLVYANEILHACHGGAMFYIEVLIDKSLVSIDKHDCLWMHDLIQEMGQEIVRQEAPTNPCERSRLWHHEDVLRVLHENSGSSKIEGIMLKSPQQEVAWSGLAFEKMNNLRILIIRNALFSTGPRHFPNNLRLLYWEGCPSVTLPEDFYPENIVVLRLCRSYIRLVEPIKRLEYLTHMLFSECEFITEVPNMSQAPNLKELIVVDCCNLIKVHDSVGSLSKLEVLKVNGCRKLKSFPHEIKLASLEHLDLSFCESLVYFPNILGKMDALSTIFADNTAIEELPHSIGNLSGLQVLSLNSCSSLGELPDKIFMLENLVWLLLGESKPHSRKSLKKSMQDSHPIIRSTNLKIVNLENCGILDEDLHLTMNCFRNLQELNLSGNDIVSLPEYIKECAYLEKLELSDCKRLRDIPELPSTLEEIVADNCISLTRKSLSHLWSQARKEMCHLLISMPASTFPDWLNFCWKGETLSFRVRGNFPVFALAFEVDKAGASVGLRPGRELEIPVSHQTLRGRMSINGHEVSKLGDNIILPSIEGHVCVTDIRRAFLDKEYCKGLDRFLELDWNDVEIEAKFFFAFYQ 1033
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g1059 1033 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 22 764 IPR044974 GO:0006952
Alju04g1059 1033 ProSiteProfiles Leucine-rich repeat profile. 827 848 IPR001611 GO:0005515
Alju04g1059 1033 Pfam TIR domain 21 164 IPR000157 GO:0007165
Alju04g1059 1033 SUPERFAMILY "Winged helix" DNA-binding domain 425 531 IPR036390 -
Alju04g1059 1033 Gene3D Ribonuclease Inhibitor 554 725 IPR032675 -
Alju04g1059 1033 ProSiteProfiles TIR domain profile. 19 186 IPR000157 GO:0007165
Alju04g1059 1033 SUPERFAMILY L domain-like 559 892 - -
Alju04g1059 1033 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 187 448 IPR027417 -
Alju04g1059 1033 PRINTS Disease resistance protein signature 297 311 - -
Alju04g1059 1033 PRINTS Disease resistance protein signature 220 235 - -
Alju04g1059 1033 PRINTS Disease resistance protein signature 390 404 - -
Alju04g1059 1033 PRINTS Disease resistance protein signature 695 711 - -
Alju04g1059 1033 FunFam Disease resistance protein (TIR-NBS-LRR class) 17 187 - -
Alju04g1059 1033 Gene3D - 355 439 IPR042197 -
Alju04g1059 1033 Gene3D Ribonuclease Inhibitor 726 907 IPR032675 -
Alju04g1059 1033 SMART till_3 20 160 IPR000157 GO:0007165
Alju04g1059 1033 Gene3D - 189 349 IPR027417 -
Alju04g1059 1033 SUPERFAMILY Toll/Interleukin receptor TIR domain 17 160 IPR035897 -
Alju04g1059 1033 Gene3D - 15 188 IPR035897 -
Alju04g1059 1033 Pfam NB-ARC domain 201 435 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g1059 Alju-ChrAlju04 16359940 16363946 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g1059 21 861 WRKY Transcription Factor Family AT4G12020 29.780 5.77e-89 312