Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g1039 ATGGCAACTCAAATCGCAGCACTGTCATCGTTTGGCTTCCCCCGTGAAATCAAGTATAGATATGATGTTTTCTTGAGTTTCAGGGGTGAAGATACTCGCCACTCCTTTACTGTTCTTCTCTATGATGCCTTACGACGTAAGGGAATCAAGGCCTTCATTGACGACAAGAAGCTTGGCAAAGGTGAACGGATTGCACCTGCACTTCTTAAAGCCATAGAGAAATCAAGGATTTCCATTATTGTGTTCTCTCGGAACTACGCTACTTCCACATGGTGTCTGGATGAACTCGCCCACATCATTCAGTGTAAGGAGCAGAAGAACCAGGTGGTTATGCCAATATTTTACAAGGTGAATCCGGTGGATGTACAATATCAAACAAATAGCTTTGGCGAAGCCATGGCTACTCATGAAGTTAGGTTCGGAGATAACGTGGAGAAAGTGCAAAAATGGAGATTTGCTTTGTCTGAAGCTGCTAGTTTGTCACCAGCATGGCTTTTTGAAGACGGATACCAATCTGGGTTTATTGAAGGGATTGCTAAAGATGTTTATGCTATGCTTCCTCCTAAACGCTTCCATAACATAGGTCACATGGTCGGACTTGAACCTCGTATAGAAGAAGTGATGTCACTTCTTGATAATTCTGATGATGGCGCTTGTATGTTGGGGATTCATGGACCTGGTGGAATTGGTAAAACAACCCTTGCGAAAGCCATTTATAATTCAATCTTCTACCAATTTGAAGGTTCATGTTTTTTGTTTGATGTTAGAGAAGAATCAAAGAAATTCCATGGCAATGTTTGTCTTCAACAGACTCTTCTATCAGAGATTCTTGAGGAAAAGAGGATGAAGTTTGGCAGCGTTCATGAAGGAATATCAAAAATGAAACACAGGCTCTCACACAAAAAAGTTCTATTAGTTCTTGATGATGTTGATGAGCTTGAACAGATAGAACAACTTGCAGGGGCATGTGACTGGTTTGGTTGTGGAAGCAAGGTCATTATAACAACAAGAAACAAACAATTGCTGCTTGCACATAATGTTGAACAAACATATGAAATGAAGGAGCTAAATGATTATGACTCTCTTGAGCTCTTTTGCTGGCATGCCTTCCATACGATCAAAATTCCAAAAGGCTATCAAGATATGTCTAGACATGTGATAAGTTATGCCCAGGGCCTTCCTCTGGCTTTAAGAGTAATAGGCTCCAATTTGGCATATAAAAATTTCGAGGAATGGAGGTCTATATTGGAAAAATATGATCGAATCCCTGAAAGTTCAATTCATGAGGTACTAAAGATAAGCTATGATTGCCTGCAAGATGGTGCTAAGATCATTTTTCTTGATGTTGCTTGTTTCTTTACAAAAGAGATACTAGAGTCTGTTGAAGAAATACTAGAAGCTTGTCATTCTGGTGCAAGGTTTTATATTGAAGATCTTGTCCGTAAATCTCTGTTAGCTGTTGATAGGGATGGTCGTCTGTGGATGCATGATCTAATACATAGTATGGGTAAAGAGATTGTTAGGCAGGAGGCACCATTAAATCCTGATAAACGCAGTAGAATATGGGATTACAAGGATATTCTTACTGTGCTTCATGAAGATTTAGGAAGCGATAAGATTGAAGGAATAATGTTTGATCCACCTCAACAAGAACAAGTGGAGTGGAGTGGTATGTCATTTAAAAAGATGAATAATCTTAGGATCCTTGTGGTTCGGAATGCTCAGTTTTCAACTGGCCCTAAATATTTTCCCAATAATTTAAGATGGCTTGAGTGGAAGGGATATCCGTGCACAACTTTACCATCAGATTTTTCTCCTGGGAAATTAGTTATATTGAGGTTACGGAATAGTTTTTTCAAACTGGTGGAGCCATTCGAGAGGTTTGAACATGTGACATTGTGGTCTCATCAGCCAAACAGGAGAATTAAACGACACCCATTTTGTCATTCTTACAAGAGAAAGATGGTTTTCCTAATGCGTAAGCATGTTTGGAGATTTCTAAACGAAGTGAAGTTTATTGAAAGGATTGTCAAAGATGCATATGCTATGCTACCTCCTAAAAGCTTCCATAACACTGATCATATGGTCGGACTTGAGCCTCGCATTGAGGAGGTGATATCACTTTTGAATAAATCTTATGATCGTGTTTTGCTACATGAAAATTCTGGAAGTAGTAATATTGAAGGAATAATGTTTGATCCGCCTCAAAAAGAAGAGATTGGAAGAGCCGTTCAAGAGATTTGA 2244 0.3917 MATQIAALSSFGFPREIKYRYDVFLSFRGEDTRHSFTVLLYDALRRKGIKAFIDDKKLGKGERIAPALLKAIEKSRISIIVFSRNYATSTWCLDELAHIIQCKEQKNQVVMPIFYKVNPVDVQYQTNSFGEAMATHEVRFGDNVEKVQKWRFALSEAASLSPAWLFEDGYQSGFIEGIAKDVYAMLPPKRFHNIGHMVGLEPRIEEVMSLLDNSDDGACMLGIHGPGGIGKTTLAKAIYNSIFYQFEGSCFLFDVREESKKFHGNVCLQQTLLSEILEEKRMKFGSVHEGISKMKHRLSHKKVLLVLDDVDELEQIEQLAGACDWFGCGSKVIITTRNKQLLLAHNVEQTYEMKELNDYDSLELFCWHAFHTIKIPKGYQDMSRHVISYAQGLPLALRVIGSNLAYKNFEEWRSILEKYDRIPESSIHEVLKISYDCLQDGAKIIFLDVACFFTKEILESVEEILEACHSGARFYIEDLVRKSLLAVDRDGRLWMHDLIHSMGKEIVRQEAPLNPDKRSRIWDYKDILTVLHEDLGSDKIEGIMFDPPQQEQVEWSGMSFKKMNNLRILVVRNAQFSTGPKYFPNNLRWLEWKGYPCTTLPSDFSPGKLVILRLRNSFFKLVEPFERFEHVTLWSHQPNRRIKRHPFCHSYKRKMVFLMRKHVWRFLNEVKFIERIVKDAYAMLPPKSFHNTDHMVGLEPRIEEVISLLNKSYDRVLLHENSGSSNIEGIMFDPPQKEEIGRAVQEI 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g1039 747 Gene3D - 189 351 IPR027417 -
Alju04g1039 747 Gene3D - 16 188 IPR035897 -
Alju04g1039 747 SMART till_3 20 160 IPR000157 GO:0007165
Alju04g1039 747 Gene3D - 355 439 IPR042197 -
Alju04g1039 747 PRINTS Disease resistance protein signature 220 235 - -
Alju04g1039 747 PRINTS Disease resistance protein signature 390 404 - -
Alju04g1039 747 PRINTS Disease resistance protein signature 297 311 - -
Alju04g1039 747 SUPERFAMILY L domain-like 560 628 - -
Alju04g1039 747 FunFam Disease resistance protein (TIR-NBS-LRR class) 17 187 - -
Alju04g1039 747 SUPERFAMILY "Winged helix" DNA-binding domain 426 531 IPR036390 -
Alju04g1039 747 SUPERFAMILY Toll/Interleukin receptor TIR domain 18 160 IPR035897 -
Alju04g1039 747 Pfam TIR domain 21 183 IPR000157 GO:0007165
Alju04g1039 747 Pfam NB-ARC domain 203 422 IPR002182 GO:0043531
Alju04g1039 747 ProSiteProfiles TIR domain profile. 19 186 IPR000157 GO:0007165
Alju04g1039 747 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 190 448 IPR027417 -
Alju04g1039 747 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 21 636 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g1039 Alju-ChrAlju04 15828696 15839920 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g1039 21 620 WRKY Transcription Factor Family AT4G12020 29.557 5.00e-70 248