Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g1038 ATGATCACTCCAAATCAAGAGCCGCCATCTTCTGTATCGTCCTCCAGCGAATCCAATTCCAATCACTACGATGTTTTCCTGAATTTCACAACCGAGACGACATTCACTACCACTCTCTGTGATTCTTTGCGCAAGAAGGGGATCGACAAAATCTTCGTCGACCCCAAGAAATTGAGGAAGAAGAAAAGGAAACATGTTTTTGCATCACCCGATCCTCTTACAGTAATTAAAGAATCAAAGGTTTCTATTCTTGTGTTCTCTGAAGATTATGCTTCTTCCGCTGATTGCCTTGATGAGCTCGTCGAGATTATGGAGTCCAAGAAGAAAAAGAAGAAGCAAGTGGTTTTTCCGATCTTCTACCAAATAGAACCAACGATTGTTCGGCATCAGAAACATAAGTATGGAGAAGCCATGGCTGCTCATCAACAGCGCTTCGGAGACGAACAGGTTCAGAAATGGAAGTTGGCTATGAATGAAGCCGCCGGTTTGTCCGGATGGCATTTTGAACCAGGATCTGAAAATGACGTTGTTGAGAAGATTGTTGAAGTGGCCTTTTCCAAGCTGCCGCCTAAAGGATTACATATTGGGGAGCACATAGTTGGACTCGGCACTCGCATAAAAGATGTGACTTCACTTCTTGATACTGTGCCTATTTTAGGAATTCATGGAACTGCAGGAGTTGGCAAAACGACACTTGCAAAAGCTGCATACAATTCAATTGTCCACCAATTTGAAGAGGCTTGTTTTCTTTCTGACATCAGAGAAGCTCCAAAAGGATGTGAAGGCATGGTAAGTCTTCAAAAGACAATTTTATCAGAGATTCTTGATGAGAAGAATAATAACAGGTTTCAAAGTGTTAAAAAAGGGATCTCTAAGATAAAGAAGAGGCTATGCCGTAGAAGAGTTCTTCTTGTTCTTGATGATGTGGATGAGATGGAACAATTGAAAAAACTTATCGGAGGTCGTAAGTGGTGTGGAAATGGAAGCAAAGTCATTGTAACAACCAGAAATAAGCAATTACTGATTGATGGTCATATTGATGAATATGAAATGAAGGAGCTAAATGACAATGACTCTCTTGAGCTTTTCTTTCAATATGCCTTTCCCTCTGAGAAACCTAAAGTGGAGTATGAAGAAATGTCCAAACGTATGGTGAGTTATGCACAAGGCCTTCCTTCGGCTTTGAAAGCAATGGGCTCCAAATTAAATCGTAAAAGCGTGGAGGCATGGAAATGTGCATTGGATCAATTGGAGAGACTTCCAGGGAGGAAGGTTGAAGATGTTCTCCAAATAATGGGAAACGTTTCTGAAATGTTAGACTACCTTGATGCTTCTAGGGCAAATCTAAGTCCCAGGGACAATATATATGTGAAGCATCTTTCTAAATCCAAGGAAAGGAGAAAAGTGGCCATGAAGACATGCTTGTGA 1428 0.4104 MITPNQEPPSSVSSSSESNSNHYDVFLNFTTETTFTTTLCDSLRKKGIDKIFVDPKKLRKKKRKHVFASPDPLTVIKESKVSILVFSEDYASSADCLDELVEIMESKKKKKKQVVFPIFYQIEPTIVRHQKHKYGEAMAAHQQRFGDEQVQKWKLAMNEAAGLSGWHFEPGSENDVVEKIVEVAFSKLPPKGLHIGEHIVGLGTRIKDVTSLLDTVPILGIHGTAGVGKTTLAKAAYNSIVHQFEEACFLSDIREAPKGCEGMVSLQKTILSEILDEKNNNRFQSVKKGISKIKKRLCRRRVLLVLDDVDEMEQLKKLIGGRKWCGNGSKVIVTTRNKQLLIDGHIDEYEMKELNDNDSLELFFQYAFPSEKPKVEYEEMSKRMVSYAQGLPSALKAMGSKLNRKSVEAWKCALDQLERLPGRKVEDVLQIMGNVSEMLDYLDASRANLSPRDNIYVKHLSKSKERRKVAMKTCL 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g1038 475 PRINTS Disease resistance protein signature 296 310 - -
Alju04g1038 475 PRINTS Disease resistance protein signature 218 233 - -
Alju04g1038 475 PRINTS Disease resistance protein signature 388 402 - -
Alju04g1038 475 Pfam TIR domain 23 168 IPR000157 GO:0007165
Alju04g1038 475 SUPERFAMILY Toll/Interleukin receptor TIR domain 12 166 IPR035897 -
Alju04g1038 475 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 195 431 IPR027417 -
Alju04g1038 475 Pfam NB-ARC domain 218 422 IPR002182 GO:0043531
Alju04g1038 475 Gene3D - 19 187 IPR035897 -
Alju04g1038 475 ProSiteProfiles TIR domain profile. 21 188 IPR000157 GO:0007165
Alju04g1038 475 Gene3D - 353 433 IPR042197 -
Alju04g1038 475 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 23 424 IPR044974 GO:0006952
Alju04g1038 475 SMART till_3 22 163 IPR000157 GO:0007165
Alju04g1038 475 Gene3D - 188 345 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g1038 Alju-ChrAlju04 15780657 15783211 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g1038 18 400 WRKY Transcription Factor Family AT4G12020 25.700 5.48e-30 122