Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g1032 ATGGCGGACGTCATCATTTGGACGAAGAAGAAGAACAAAGCCAACCTCTTACTCGGCCGTTTCGAAGTCGGAAAACTCCTCGGCCATGGAACCTTCGCGAAGGTCTACTATGCTCAAAACATCAAAACCAACGAAGGCGTCGCCATCAAAATCATCGACAAAGAGAAAATCCTCAAAGGCGGCTTAGTCTCTCACATCAAGCGTGAGATCTCGATCCTCCGCCGTGTCCGCCACCCTAACATCGTCCAGCTCTTCGAAGTCATGGCCACGAAGACCAAGATCTATTTCGTCATGGAATATGTACGTGGCGGTGAGTTATTCAATAAAATTGCAAAAGGACGGTTAAAGGAAGAAGCGGCAAGAAAATATTTCCAGCAATTAATCTCCGCCGTAGAATTCTGCCACGCCAGAGGCGTGTACCACCGCGATCTGAAGCCGGAAAACTTGTTGCTCGACGAAAATGGCGATCTCAAGGTTTCCGATTTTGGCCTTAGCGCCGTCTCCGATCAAATCAGACAAGACGGGTTGTTTCACACTTTTTGTGGAACGCCGGCGTATGTTGCTCCTGAGGTTCTGGCTAGAAAAGGATACGACGGAGCCAAAGTTGATCTCTGGTCTTGTGGCGTTATCCTCTTCGTTTTAACGGCTGGTTATTTACCATTCCATGATCAGAACATTATGGCTATGTACAAGAAAATTTACAAAGGCATTTTCCGGTGTCCCAAGTGGTTCTCGCCGGAGCTAAATATATTATGTACTCGTCTTCTCGATACAAATCCGGAAACCAGAATCTCAATTCCAGAAATCATGGAAAACAAGTGGTTCAAGAAAGGTTTCAAACAAATCAAATTCTATTTCGAGGACGATAAGATCTGTACCAGTGTAGATGATATTGGCATACCGGATTTTAACCAAGATGACGTAGAATCAGTCTCGGATTATTCGATATCAGAGTCGGACTCAGAGCTAGAAGTTAAAAGAAGAAGGAATGCTTCATTTCCAAGACCAGCAAGCTTGAATGCATTTGATATAATATCATTCTCTGCAGGGTTTGATCTTTCTGGTTTGTTCGAGGAGAAAGGGGATGAGGCCAGGTTCGTGTCTGGCGCGCCGGTGTCGGAGATTATATCAAAGTTGGAGGAAATTGCGGAGGTGGTTAGATTTAAGGTGAGGAAGAAGGATTGCAGGGTGAGCTTGGAGGGATGGAGAGAAGGTGTGAAGGGGCCGTTGACGATTGCGGCGGAGATATTTGAGCTAACTCCGTCGTTGGTGGTGGTGGAGTTGAAGAAGAAAGCAGGGGACAAAACAGAGTATGAACAATTTTGTAACTCTGAATTGAAACCTGCCTTGCACAAGTTGATGATGAAATATGAATTTGCAACTTCTTCTTCAAAGACAAATTCTTCTGACGACATTCCTCAAACAGATACTGATTCATAG 1440 0.4493 MADVIIWTKKKNKANLLLGRFEVGKLLGHGTFAKVYYAQNIKTNEGVAIKIIDKEKILKGGLVSHIKREISILRRVRHPNIVQLFEVMATKTKIYFVMEYVRGGELFNKIAKGRLKEEAARKYFQQLISAVEFCHARGVYHRDLKPENLLLDENGDLKVSDFGLSAVSDQIRQDGLFHTFCGTPAYVAPEVLARKGYDGAKVDLWSCGVILFVLTAGYLPFHDQNIMAMYKKIYKGIFRCPKWFSPELNILCTRLLDTNPETRISIPEIMENKWFKKGFKQIKFYFEDDKICTSVDDIGIPDFNQDDVESVSDYSISESDSELEVKRRRNASFPRPASLNAFDIISFSAGFDLSGLFEEKGDEARFVSGAPVSEIISKLEEIAEVVRFKVRKKDCRVSLEGWREGVKGPLTIAAEIFELTPSLVVVELKKKAGDKTEYEQFCNSELKPALHKLMMKYEFATSSSKTNSSDDIPQTDTDS 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g1032 479 FunFam Non-specific serine/threonine protein kinase 10 326 - -
Alju04g1032 479 CDD STKc_SnRK3 20 274 - -
Alju04g1032 479 SMART serkin_6 21 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g1032 479 Pfam Protein kinase domain 21 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g1032 479 ProSiteProfiles Protein kinase domain profile. 21 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g1032 479 Gene3D Kinase associated domain 1, KA1 334 456 - -
Alju04g1032 479 ProSitePatterns Protein kinases ATP-binding region signature. 27 50 IPR017441 GO:0005524
Alju04g1032 479 ProSiteProfiles NAF domain profile. 334 358 IPR018451 GO:0007165
Alju04g1032 479 Gene3D Transferase(Phosphotransferase) domain 1 11 330 - -
Alju04g1032 479 FunFam Non-specific serine/threonine protein kinase 12 100 - -
Alju04g1032 479 Pfam NAF domain 336 392 IPR004041 GO:0007165
Alju04g1032 479 CDD CIPK_C 340 450 - -
Alju04g1032 479 SUPERFAMILY Protein kinase-like (PK-like) 17 320 IPR011009 -
Alju04g1032 479 FunFam Non-specific serine/threonine protein kinase 336 454 - -
Alju04g1032 479 ProSitePatterns Serine/Threonine protein kinases active-site signature. 139 151 IPR008271 GO:0004672|GO:0006468
Alju04g1032 479 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 6 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g1032 Alju-ChrAlju04 15711707 15713146 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g1032 16 453 CBL-interacting serine-threonine protein kinases AT4G18700 80.594 0.0 736
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Alju04g1032 Pkinase 5.7e-74 CL0016