Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g1031 ATGAGACCCGTTTTTAGATTCTTGATTCTTTTGCCTCTGCTTGCTCTTGTTGAATCTTCCTCCTCCTCCTCCTCCTGCAAACTTAGTCCACAAGACCTCGACCTAGTGTCCAAGGCCTTCAAATCAGTCTCCGGATTCAACCTTTCCTGGTTATCTCACTGCTCCGTCTTCGAGGATCAGTTCAGGGCCATAAGGCTTACTTCCAAGAATCTGCGTGGGGCTATTTCTTGGAAGTTTCTGAGGAACGTTTCAAACTTGCAGGTTCTTGATCTCTCTGGGAATTCTCTTCAAGGTCAAGTCCCTGGTTGGTTCTGGGCAAAATCGAGCTTATTGGAGGTCAATCTTTCCAATAACAGGTTCGGAGGCACCATTAATGGCTCCTTCGTTTCTTCTCTTCAAATGCTTAATCTCTCACATAATAGGCTCACAAATCATGTTCAGATTTATGGGTTTTCTAAACTGAAAGTTCTTGACCTTTCTCACAACAATTTGAAATACCTCCCTTCTGGGTTTCAGAAGCTTACCAACCTGAACCACCTTGACCTATCCAACTGTAAAATCAAAGGAAATGTCAAACCTGTGTCTGTTTTGAACTCACTGAGTTACCTGGACCTCTCAAATAACGTGTTGAATGGTACTTTCCCTTCTGATTTCCCTCATCTTCATACCCTTCATTTCTTGAACATCTCTCACAACAATTTCAGAGCTGTACTTAGCTTCAATGCGTACAAAAAGAAATTTGGCAAATCCGCTTTCCTTCACGTCGGTGCCAACTTCAATTACAATGCCTCCAAAATGGCGCCGTTTCATCACCCTTCATTTCACTATCCGAAACGAAACCCGATTAAGAAACGACCCAAATCAAAATCTAAAAAACTGATACTCTCTGTGTGCTCTACTTCAGGAATTGTCGTTGTTCTATTGTGTATATCTATATTCTGCATCTACAGAAAGAAGAGACGTGTGGCTAAGAGAAATAAATGGGCGATCTCGAAGCCAGTCCCACCACTGCCTTTTAAGGTTGACAAATCTGGACCGTTCGCTTTCGAGACTGAATCAGGTACGTCGTGGGTGGTTGATCTGAAGGAGCCATCGTCGGCGCCTGTAGTGATGTTCGAGAAGCCACTGATGAACCTGAACTTCAAGGACCTGATCGCTGCCACGTCACACTTCGGCAAGGACTCTCTGCTCGCCGAGGGGAGGTGTGGTCCCGTCTACAGAGCCGTCTTACCCGCCGGCGGAGACATCCACGTGGCAATCAAGGTTCTGGAGAACGCCAAAGACGTCGATCATGACGACGCCGTCGAGTTGTTCGTTAAACTCTCAAAGCTGAAGCACCCAAACGTACTGCCTCTCTCCGGTTACTGTATTGCAGGAAAAGAGAAGCTGGTGTTGCACGAGTTCATGTCGAACGGCGATTTAGGAAGGTGGCTTCATGAGTTGCCAACGGGGACTACTAACATGGAGGATTGGAGTTGCGACACATGGGAGATTCAAAACGGCGTCGGGTCTCAGGCGCACTCTCCAGAAACCATGGATTGGGGAACACGACACCGTATCACCGTCGGGATAGCACGTGGCCTGGCATATCTCTACCATGCCGGATCAAAGCCCGTTGTGCACGGCCACCTAGTCACTTCCAATATCTTACTTGCGGACGACTTTGAGCCCCGAATCGCGGATTTAGGGTTCCAGAAAATCGGGAAGCAAGATAAGCCGATTTGCACGACGGAGACAGAAGTTTACTGCTTCGGTATCGTACTGATGGAGCTCTTAACGGGGAGGGCCGGCACAGCGTAG 1800 0.4756 MRPVFRFLILLPLLALVESSSSSSSCKLSPQDLDLVSKAFKSVSGFNLSWLSHCSVFEDQFRAIRLTSKNLRGAISWKFLRNVSNLQVLDLSGNSLQGQVPGWFWAKSSLLEVNLSNNRFGGTINGSFVSSLQMLNLSHNRLTNHVQIYGFSKLKVLDLSHNNLKYLPSGFQKLTNLNHLDLSNCKIKGNVKPVSVLNSLSYLDLSNNVLNGTFPSDFPHLHTLHFLNISHNNFRAVLSFNAYKKKFGKSAFLHVGANFNYNASKMAPFHHPSFHYPKRNPIKKRPKSKSKKLILSVCSTSGIVVVLLCISIFCIYRKKRRVAKRNKWAISKPVPPLPFKVDKSGPFAFETESGTSWVVDLKEPSSAPVVMFEKPLMNLNFKDLIAATSHFGKDSLLAEGRCGPVYRAVLPAGGDIHVAIKVLENAKDVDHDDAVELFVKLSKLKHPNVLPLSGYCIAGKEKLVLHEFMSNGDLGRWLHELPTGTTNMEDWSCDTWEIQNGVGSQAHSPETMDWGTRHRITVGIARGLAYLYHAGSKPVVHGHLVTSNILLADDFEPRIADLGFQKIGKQDKPICTTETEVYCFGIVLMELLTGRAGTA 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g1031 599 Gene3D Ribonuclease Inhibitor 11 254 IPR032675 -
Alju04g1031 599 Pfam Protein tyrosine and serine/threonine kinase 395 568 IPR001245 GO:0004672|GO:0006468
Alju04g1031 599 ProSiteProfiles Protein kinase domain profile. 391 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g1031 599 FunFam Putative LRR receptor-like serine/threonine-protein kinase 352 468 - -
Alju04g1031 599 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 31 596 - -
Alju04g1031 599 SMART tyrkin_6 391 598 IPR020635 GO:0004713|GO:0006468
Alju04g1031 599 Gene3D Transferase(Phosphotransferase) domain 1 502 597 - -
Alju04g1031 599 PRINTS Leucine-rich repeat signature 86 99 - -
Alju04g1031 599 PRINTS Leucine-rich repeat signature 129 142 - -
Alju04g1031 599 Pfam Leucine rich repeat 70 120 IPR001611 GO:0005515
Alju04g1031 599 Pfam Leucine rich repeat 131 187 IPR001611 GO:0005515
Alju04g1031 599 ProSiteProfiles Leucine-rich repeat profile. 153 175 IPR001611 GO:0005515
Alju04g1031 599 SUPERFAMILY L domain-like 43 238 - -
Alju04g1031 599 Gene3D Phosphorylase Kinase; domain 1 351 468 - -
Alju04g1031 599 SMART LRR_typ_2 83 106 IPR003591 -
Alju04g1031 599 SMART LRR_typ_2 197 220 IPR003591 -
Alju04g1031 599 SMART LRR_typ_2 151 173 IPR003591 -
Alju04g1031 599 SUPERFAMILY Protein kinase-like (PK-like) 381 595 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g1031 Alju-ChrAlju04 15692175 15694490 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g1031 37 599 Receptor kinase-like Gene Family AT5G07280 28.526 5.31e-61 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-2 Alju04g1031 PK_Tyr_Ser-Thr 3.9e-20 CL0016