LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Alju04g1016	ATGGACTTTCCTTTTAGACAGAGGGGTTTGAAGAAGCAGCTTCGCTCTTCTTCCCCTCAAAGAGTTCTTCTGAGCTTAATTTCATCATTTTTGGCTGAAATCATGAGTAGTTGTGATGAATGGAAGCCTTTTCTAGTTATGATAGCTATCGATTTAGCTTTCGCAGTGGTGAATATTCTTCTCAAGAAATCTCTTCAAGAGGGAATGAACCATTTGGTTTTCATCACCTACAGATTGACAACTTCAAGTATTTTTCTAGCACCAATCGGCTACTTTTGGGAAAGAGAAGGCAGACCAAGGCTCACATTTAGAATTCTATGTTACCTCTTTCTCAGTGCCATTGTTGGGGCATCAGTGACACAGTATTTTTTCCTTCTGGGAATTCAATACACTTCTGCTACCTTTGCTTGTGCCTTTATCAACATAGTGCCTGTGATCACATTCATCATGGCATTGCCATTTGGGTTAGAGAGTGTGAACATAAAATGCAACAGTGGAAGGGCAAAGATCCTAGGAACAGTGGTATGCATTGGAGGGGCATTGATGTTGACACTGTACAAAGGGAAGCCATTGTTCAGTTTTGATTCTTCTTCTTCTTCATCTTCTTCATCAGCACCAATATCAAAAAGTTCTTCTGCAATAAAGTTGGCAGCTTCACATGTGAATAGTGAGAAATGGACCTTGGGTGTAATAGCTTTGATCTTGGGGACACTGTTTTGGTCTTCATGGTTTCTTGTGCAATCAAAGATAGGCAAAAGGTTTCCTTGTCAGTATTCAAGCACAGCCATCATGACCTTCTTTGGTGCCATTCAATCTGCTGCTCTTAGCTTAGCCATTGGAAGGAACTTGTCCATGTGGGTTCTCAAGGGAAAGATACAAATCATCACTGTTCTGTTTTCTGGAATGATAGGATCAGGATTGTGCTTTGTGGGAATGTCATGGTGTGTGAAGAAAAGGGGTCCAGTATTCACTGCAGCTTTCAGCCCTTTTGTTCAGATTATGGCAGCCATGATCGATGTCCCTCTCTTGCATGAACAGCTTTATCTTGGAAGTGTATTGGGATCCATACTGGTGATGCTGGGGTTATATATTCTTCTGTGGGGAAAGAACAAGGAGATGAAGAACAAGATGACGAAGCTGGTCCAAGAAGCTGAAGAAACCAAAGAACATGACCCACCAATTCAGCGACAAATCACAGTTTAA	1203	0.4148	MDFPFRQRGLKKQLRSSSPQRVLLSLISSFLAEIMSSCDEWKPFLVMIAIDLAFAVVNILLKKSLQEGMNHLVFITYRLTTSSIFLAPIGYFWEREGRPRLTFRILCYLFLSAIVGASVTQYFFLLGIQYTSATFACAFINIVPVITFIMALPFGLESVNIKCNSGRAKILGTVVCIGGALMLTLYKGKPLFSFDSSSSSSSSSAPISKSSSAIKLAASHVNSEKWTLGVIALILGTLFWSSWFLVQSKIGKRFPCQYSSTAIMTFFGAIQSAALSLAIGRNLSMWVLKGKIQIITVLFSGMIGSGLCFVGMSWCVKKRGPVFTAAFSPFVQIMAAMIDVPLLHEQLYLGSVLGSILVMLGLYILLWGKNKEMKNKMTKLVQEAEETKEHDPPIQRQITV	400

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Alju04g1016	400	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	77	187	-	-
	Alju04g1016	400	Coils	Coil	370	390	-	-
	Alju04g1016	400	PANTHER	WAT1-RELATED PROTEIN	42	379	IPR030184	GO:0016020\|GO:0022857
	Alju04g1016	400	Pfam	EamA-like transporter family	45	184	IPR000620	GO:0016020
	Alju04g1016	400	Pfam	EamA-like transporter family	228	366	IPR000620	GO:0016020
	Alju04g1016	400	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	290	371	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Alju04g1016	Alju-ChrAlju04	15510347	15516019	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Alju04g1016	40	374	Nodulin-like Gene Family	AT1G11460	40.476	5.47e-89	271