Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g0975 ATGCTGGCAGCAAGGAACTTCTTTGCTTTCCTAATTATTGCGTTGAGTTCTTTCAGATGGCTCAGATACGCAGAATCAAAACTGCCCCAAGAAGAAGTTGATGCTCTTCAAGAAATTATTAGCACAATGGGCAGCACCCACTGGAAGTTTGACGGCGACTCTTGTCAAATTGAAATGGTGGGGTTGACACCAGTGCCACCCAGTGGATCACAGAGCAGCATTGGTTGTCAATGTTTTTCTGTCAACGGCACTAACTGTCATGTTGTGAGCATTTCGCTCAAGGGTTACAGCCTTCCTGGTGTGCTTCCACCTCAACTGGTCAAGCTTCCTTACCTTAAAGAAGTTGATTTTGCTCGCAATTGCCTAAATGGTACAATCCCTAAAGAATGGACTTCAATGAATTTATCTTCAATCTCTCTTCTTGTGAATCGTTTATCAGGGGAAGTTCCTAAGGAGCTGGGAAAGATGACCTCTCTAACACACCTGAGCCTTGAATCAAACCAATTCACTGGTCTTGTTCCCTCCGAGCTTGGAAATCTGATTAACCTGCAGACTTTGATTCTGTCATCCAATAAGTTTTCAGGACATTTACCAGTAACATATGCTCAATTCAAGAATTTAACAGATTTTAGGATAAATGATAACAATTTCAGTGGAACAATACCTAATTTCATCCAGAATTGGAAACTACTTCAAAGACTAGAAATGCATGGAAGTGGACTTCAAGGACCCATCCCGTCAAACATATCTCTTCTAAGTAATTTACAGCAACTGAGGATTAGTGACATAATTGGTCCAAGTCGGGATTTTCCTTCCCTAAGCAATATGACAGCACTGATAAGATTGGTTTTAAGAAATTGCAATATCACTGGAGAGCTGCCTGCCTACATCTGGACAATGCAGGACTTGGAAATGCTGGATGTCAGCTTTAATAAGTTAGTTGGGGAAATTCCAACAACTGTCGGTGCAAAGCATCTGAAATTTGTCTTTTTGACTGGCAACATGTTAAGTGGAAGTATACCAGACTCAATCTTGAAGGCTGGAAGCAACGTTGATCTTTCATACAACAATTTTACATTAAGTCCTGAGCAATCTGTTTGTCAAGATAATCTGAATTTACACATAAATTTGTTTCAGAGTTCCTCAGGGCCCAATGATGTAAGGAGAGCTCTGCCATGCACAAAGAATTTCAGTTGTCCAAGATATTCAACTTGCTTGCACGTTAATAGTGGTGGAAAGGATGTAACTCTGGTAGAAAATAGAGAACAATTTCTCTACATAGGAGATGGAGATGAATTAAGTGGTGCAGCAAAATTTTATTATGATTCCAACAATAACTGGGGGTTCAGCAGCACTGGGGACTTCATGGATGACAATGATTTCCTGAATACACGTTACACTGTGTTTCTGGCATCCTCAAATGTGCCAAATATATATGCAACAGCTCGCATCTCCCCAATTTCGCTAACTTATTTTCACTATTGCTTGGAAAATGGGAACTATACTGTAAATCTACACTTTGCAGAGATACAATTTACAAAAGATAAGACGTATATTAGTCTTGGGAAGCGCATATTTGATATCTATGTTCAGGGAAGATTATTTTTGAAGGATTTCAATATTGAAGATGAAGCGCATATTGCTCAAAAGCCAATTAAAATACCAATATATAATGTTGATGTAAGAGATAATGTTTTGGATGTTCGATTCTATTATGCTGGCAAAGGAACTACAAGAATTCCTAACAGTGGAGTTTATGGTCCCCTCGTGTCAGCTTTATCTATTGTTTCTGAGTCTAAACGTTGCTCAGATGGCCCAAAAGGGGGAAGTGCTAATATAATAATTGGAGTTGCAGTTGGAGTTGGGGCTCTCTGCTTAATACTATTTATAGCGGGAGTCTTTTGGTGTAGAAGCCTCTTCAGAGGAAAATCTGAGAGGGAAAAAAGTGCAGAAGGACTAGATACTCATATGGGAACATATAGTCTACAACAGATAAGAGATGCAACTGACGACTTCAATCCTGATAACAAGTTAGGGGAAGGTGGTTTTGGTCCTGTCCATAAGGGGCAGTTATCTGATGGTACTTGGGTAGCAGTCAAACAACTTTCTTCCAAGTCCCGGCAAGGAAACCGTGAATTTTTAAATGAGATTGGCATGATATCTTGTTTGCAACACCCTAATCTTGTAAAGCTTCACGGATGTTGTATTGAAGGAGATCAACTGTTGTTGGTTTACGAGTACTTGGAAAATAATAACCTTGCCCGTGCTTTATTTAGCCAAAGAAATCAGCTTAAACTTGATTGGCCTACAAGGCTTAAAATCTGTATTGGCATAGCGAAGGGTCTTGCATTTCTTCATGAAGAATCAGCACTCAAGATTGTTCACCGAGACATCAAGGCCACTAATGTGTTATTGGATGGGAATTTAAATCCTAAGATATCTGACTTTGGATTGGCTAGGCTTAATGAAGAGGAGAAGAGCCATATTAGTACCCGAGTGGCTGGGACCATAGGATATATGGCACCAGAATATGCATTATGGGGTTACCTTACGTATAAGGCAGATGTTTATAGTTTCGGAGTTGTGGTCTTGGAAATTATTAGTGGGAAAAGCAACAATTATTGTATGCCAAGTGATGATTGTGTTTGTCTTCTGGAATGGGCATGGCATTTGCATAAAACTGAGAACATGATGCAAGTAGTTGATGAAAGGTTGGGATCTGATGTGAACCCAAAAGAAGTTGAAGTCATGTTGAAAGTGGCTATTCTGTGCACTAATGCTTCGCCGTCGCTTAGGCCGATGATGTCTGAAGTCGTGAACATGCTCGAAGGAAGAATGAGCATTCCTGAGGTTAACCCGGAGCAAAGTGCTGGTGAAGATTTGAGGTTTAAAGCCTTAAGGGACATTCAAAAGCACAGAGAAAGTCAGAGTGTGAGCACAAGCCAAACAGACAATTCAAATGATGCCACTGTAAATACCTCTCTCTCAACATCAGACTATGGTTTACATGGGATACGCTCAGAACCATAA 3030 0.4013 MLAARNFFAFLIIALSSFRWLRYAESKLPQEEVDALQEIISTMGSTHWKFDGDSCQIEMVGLTPVPPSGSQSSIGCQCFSVNGTNCHVVSISLKGYSLPGVLPPQLVKLPYLKEVDFARNCLNGTIPKEWTSMNLSSISLLVNRLSGEVPKELGKMTSLTHLSLESNQFTGLVPSELGNLINLQTLILSSNKFSGHLPVTYAQFKNLTDFRINDNNFSGTIPNFIQNWKLLQRLEMHGSGLQGPIPSNISLLSNLQQLRISDIIGPSRDFPSLSNMTALIRLVLRNCNITGELPAYIWTMQDLEMLDVSFNKLVGEIPTTVGAKHLKFVFLTGNMLSGSIPDSILKAGSNVDLSYNNFTLSPEQSVCQDNLNLHINLFQSSSGPNDVRRALPCTKNFSCPRYSTCLHVNSGGKDVTLVENREQFLYIGDGDELSGAAKFYYDSNNNWGFSSTGDFMDDNDFLNTRYTVFLASSNVPNIYATARISPISLTYFHYCLENGNYTVNLHFAEIQFTKDKTYISLGKRIFDIYVQGRLFLKDFNIEDEAHIAQKPIKIPIYNVDVRDNVLDVRFYYAGKGTTRIPNSGVYGPLVSALSIVSESKRCSDGPKGGSANIIIGVAVGVGALCLILFIAGVFWCRSLFRGKSEREKSAEGLDTHMGTYSLQQIRDATDDFNPDNKLGEGGFGPVHKGQLSDGTWVAVKQLSSKSRQGNREFLNEIGMISCLQHPNLVKLHGCCIEGDQLLLVYEYLENNNLARALFSQRNQLKLDWPTRLKICIGIAKGLAFLHEESALKIVHRDIKATNVLLDGNLNPKISDFGLARLNEEEKSHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVVLEIISGKSNNYCMPSDDCVCLLEWAWHLHKTENMMQVVDERLGSDVNPKEVEVMLKVAILCTNASPSLRPMMSEVVNMLEGRMSIPEVNPEQSAGEDLRFKALRDIQKHRESQSVSTSQTDNSNDATVNTSLSTSDYGLHGIRSEP 1009
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g0975 1009 FunFam Putative LRR receptor-like serine/threonine-protein kinase 748 954 - -
Alju04g0975 1009 Gene3D Ribonuclease Inhibitor 265 381 IPR032675 -
Alju04g0975 1009 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 198 264 - -
Alju04g0975 1009 Gene3D Transferase(Phosphotransferase) domain 1 748 959 - -
Alju04g0975 1009 SUPERFAMILY Protein kinase-like (PK-like) 657 943 IPR011009 -
Alju04g0975 1009 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 403 598 - -
Alju04g0975 1009 Gene3D - 402 600 - -
Alju04g0975 1009 MobiDBLite consensus disorder prediction 975 1001 - -
Alju04g0975 1009 MobiDBLite consensus disorder prediction 969 1009 - -
Alju04g0975 1009 ProSiteProfiles Protein kinase domain profile. 672 946 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g0975 1009 SMART serkin_6 672 942 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g0975 1009 SUPERFAMILY L domain-like 80 318 - -
Alju04g0975 1009 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 34 197 - -
Alju04g0975 1009 Pfam Protein tyrosine and serine/threonine kinase 675 942 IPR001245 GO:0004672|GO:0006468
Alju04g0975 1009 Pfam Malectin domain 405 593 IPR021720 -
Alju04g0975 1009 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 641 747 - -
Alju04g0975 1009 Gene3D Ribonuclease Inhibitor 202 264 IPR032675 -
Alju04g0975 1009 ProSitePatterns Serine/Threonine protein kinases active-site signature. 793 805 IPR008271 GO:0004672|GO:0006468
Alju04g0975 1009 Gene3D Phosphorylase Kinase; domain 1 637 747 - -
Alju04g0975 1009 Gene3D Ribonuclease Inhibitor 45 201 IPR032675 -
Alju04g0975 1009 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 266 386 - -
Alju04g0975 1009 CDD STKc_IRAK 678 944 - -
Alju04g0975 1009 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 15 978 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g0975 Alju-ChrAlju04 14970018 14980835 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g0975 6 837 Receptor kinase-like Gene Family AT1G29750 60.287 0.0 1023
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Alju04g0975 PK_Tyr_Ser-Thr 5.9e-50 CL0016