Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g0877 ATGAGCCTTGAATGTCAAGATAACTCTGTATCTGAGCTTAAAATTAGGGGAGACAAAACTGCGAAATCTGATGAGTTCAATGGATTTGCAATTCCCAATCAAACGCTGTCGATGAACTTCTCTATTGATTCTTTTATCACTGCATTAACGAGGTTGAGTAGCTTAAGGGTTCTTAGCCTGGTGTCCTTGGGAATTTGGGGTCCTCTTCCGGATAAGATTCATCGATTATCTCAGCTCGAAGTTCTGGACTTAAGCTCAAATTTCTTATTCGGTTCAATTCCACAGAAAATCTCCACAATGGTAAAGCTCAATACACTGAAACTTGATGACAATTATTTCAACGACACAATGCCAGACTGGTTTGATTCATTGTCTAATTTAAATGTCTTGAGCTTGAAAACCAACACCTTGCGGGGTTCATTCCCCTCGTCATTGTGCAAAATCAAGACCCTCACTGATATTTCTCTGTCTGGCAATGAGCTATCTGGTAAATTACCTGATTTGAGTGCTCTCACTAGCCTGCGTGTACTGAATTTGGGAGAAAACCATTTAGGTTCTGAACTGCCATTGATGCCCACAGGGCTGGTCATAGTTCTGCTAAGCAATAACTCATTTTCTGGCGAGATACCAAAGCAATTGGGTGAATTGGGTCAGCTTCAACATCTAGATCTCTCTGCAAATCATCTGAGTGGAATGCCTCCACCTTCCTTGTTCTCATTGCCAAGCATCAGTTATTTGAATTTAGGTGGCAACGTGCTGAGAGGTTCACTTCCAGATCAACTAAATTGTGGCAGCAAACTTGGTTTTGTGGATATTTCTAGTAACAAATTAATTGGTGGACTTCCTTCTTGCTTGGCCAATACGTCTGATAGAAGAGTTGTCAAATATGATGGAAATTGTTTAACTCTCGATTCTCAAGATCAGCAGCCAGGGTCTTATTGTGAAAAATCCAGCATGGGCAGGAACAAAACTATAGCAGGGGCCATTGTTGTTGGACTTGTTCTCATCCTCGGGATTTCGGTGTTGGGAGTTTTCTTTTGTATAAAATGTCTGAGGAGAAAGAGAAATAAGAACCATTTGTTGCCAAGGACTGTGCAAGATAATTCCACTACACGGTTTTCATCTCAACTCCTCGCGAATGCCAGGTTCATTTCTCAGGCTGTGAAGGTAGGGGCACAAACTACTCCAATTTGTCGACCAATTTCAGTTGAAGAGTTGAAGGATGCCACAAGAAACTTTGACTTGTCAGCATTTATTGGTGAAGGCTTCTTAGGAAAGCTATACAAAGGTAAACTAGAGAATGGAACCTACGTGGCAATACGTTCTTTAGCTCTGTCAAAGAAATGCTCAATTCAAAATCTAAAAGCTCGGTTGGATTTACTCTCAAAGCTTCAGCATCCAAATTTGGTCAGCCTCTTGGGTTACTGTATTGATAGCAGGGAACAACATGATTCAACCAGCAACAAACTTCATCTTGTATATGAGTATGTGCCCAATGGGAGTTACCACGCCTATCTGTCAGAGTTTTCTCTAGAGAAGCCACTCAAGTGGTCTGATAGATTGGCAATTTTAATTGGGGTTGCCAAGGCTGTGCACTTTTTACATACTGGGGTTATTCCAGGTTGTTTTAACAACCAATTGAAGGCAGACAATATTTTGCTTGATGAGCATCGCTTTCCCAAATTAAGTGACTATGGAATGGCCATCCTCGGAGAAGAGATTGAAAGGTTTGAGGCAAAGAATCATGACTCCAAATCATGCCAAAGGGAATCATTTGAGGATGATGTTTATAACTTTGGATTCATATTGCTTGAATCACTTGTTGGACCCATAGCAAGCGGACAAGGGGAAACGTTTTTTCTGAATGAGAAGGCATCCTTTGGAAGTCAAGATGGTAGAAGAAAAATTGTGGACCCCATAGTGTTGGCATCTAGCTCTCAGGAGTCATTATCAATCGCAATAGCTATAACATCCAAATGCATATCACCAGAACTTTCCTCTCGCCCCTCATTTGAGGATGTTTTGTGGAACTTACAGTATGCAGCTCAAGTGCAGGCTACAGCAGATGCAGACCAGAAATCAGAGTCTACATCAGAATCTCAAGATTATAAGAGAGACAAAACCTTGGATTCAACTGGTCCATACCTTTCTCTAACAAAGCAGATTATTAAACCCCAGAATCAACATGAGGATCCATAA 2199 0.4111 MSLECQDNSVSELKIRGDKTAKSDEFNGFAIPNQTLSMNFSIDSFITALTRLSSLRVLSLVSLGIWGPLPDKIHRLSQLEVLDLSSNFLFGSIPQKISTMVKLNTLKLDDNYFNDTMPDWFDSLSNLNVLSLKTNTLRGSFPSSLCKIKTLTDISLSGNELSGKLPDLSALTSLRVLNLGENHLGSELPLMPTGLVIVLLSNNSFSGEIPKQLGELGQLQHLDLSANHLSGMPPPSLFSLPSISYLNLGGNVLRGSLPDQLNCGSKLGFVDISSNKLIGGLPSCLANTSDRRVVKYDGNCLTLDSQDQQPGSYCEKSSMGRNKTIAGAIVVGLVLILGISVLGVFFCIKCLRRKRNKNHLLPRTVQDNSTTRFSSQLLANARFISQAVKVGAQTTPICRPISVEELKDATRNFDLSAFIGEGFLGKLYKGKLENGTYVAIRSLALSKKCSIQNLKARLDLLSKLQHPNLVSLLGYCIDSREQHDSTSNKLHLVYEYVPNGSYHAYLSEFSLEKPLKWSDRLAILIGVAKAVHFLHTGVIPGCFNNQLKADNILLDEHRFPKLSDYGMAILGEEIERFEAKNHDSKSCQRESFEDDVYNFGFILLESLVGPIASGQGETFFLNEKASFGSQDGRRKIVDPIVLASSSQESLSIAIAITSKCISPELSSRPSFEDVLWNLQYAAQVQATADADQKSESTSESQDYKRDKTLDSTGPYLSLTKQIIKPQNQHEDP 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g0877 732 Gene3D Ribonuclease Inhibitor 1 98 IPR032675 -
Alju04g0877 732 SMART LRR_typ_2 216 240 IPR003591 -
Alju04g0877 732 SMART LRR_typ_2 76 100 IPR003591 -
Alju04g0877 732 SMART LRR_typ_2 171 194 IPR003591 -
Alju04g0877 732 Gene3D Transferase(Phosphotransferase) domain 1 497 707 - -
Alju04g0877 732 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 497 697 - -
Alju04g0877 732 Pfam Leucine rich repeat 102 161 IPR001611 GO:0005515
Alju04g0877 732 Pfam Leucine rich repeat 195 253 IPR001611 GO:0005515
Alju04g0877 732 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 195 319 - -
Alju04g0877 732 CDD TM_EGFR-like 324 359 - -
Alju04g0877 732 Pfam Leucine Rich Repeat 78 95 IPR001611 GO:0005515
Alju04g0877 732 Gene3D Phosphorylase Kinase; domain 1 373 496 - -
Alju04g0877 732 ProSiteProfiles Protein kinase domain profile. 413 681 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju04g0877 732 MobiDBLite consensus disorder prediction 695 709 - -
Alju04g0877 732 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 376 496 - -
Alju04g0877 732 Pfam Protein tyrosine and serine/threonine kinase 416 674 IPR001245 GO:0004672|GO:0006468
Alju04g0877 732 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 41 289 - -
Alju04g0877 732 Gene3D Ribonuclease Inhibitor 193 331 IPR032675 -
Alju04g0877 732 Gene3D Ribonuclease Inhibitor 99 192 IPR032675 -
Alju04g0877 732 SUPERFAMILY L domain-like 36 302 - -
Alju04g0877 732 SUPERFAMILY Protein kinase-like (PK-like) 395 678 IPR011009 -
Alju04g0877 732 MobiDBLite consensus disorder prediction 687 732 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g0877 Alju-ChrAlju04 11830735 11834303 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g0877 1 626 Miscellaneous Gene Families AT5G14210 56.318 0.0 684
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Alju04g0877 PK_Tyr_Ser-Thr 1.2e-20 CL0016