Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g0876 ATGAAAAGGCCCAGAAATTCTCCTGGCCATAACAGGTGCGTTGTGTCTCATCTTCCCCCGGCATCACTAGAGAGCTCAATTAAGCTTCATCTTCGGATTTATCGCCTTCCTTTTGTGTGGACTGAGATGGCTGGAGGCGTTATTCAGCAATTATTGAGAAGAAAACTTCAGTCCCAACACACTACCCCATCCCTTTTGTCATCCATCATCACGAGAAAAGATGATGCTGGCTCTACTGGCAGCAGGTCCTTGAGAGCACTAGCATTAATTGGAGCCGGTGTCTCAGGGTTTTTGAGTTTTGCTACAACAGCTTCAGCTGATGAGGCTGAGCATGGCCTGGAATGTCCAAGCTATCCATGGCCTCACAAGGGCATCCTCAGTTCATATGATCATGCTTCGATTCGCCGTGGTCATCAAGTTTATACACAAGTCTGTGCGTCATGCCATTCTATGTCTTTGGTATCGTACCGTGATTTGGTTGGTGTTGCTTATACAGAAGATGAGGTAAAGGGTATGGCAGCTGAGATTGAGGTGGTTGATGGCCCTAATGATGAGGGTGAGATGTATACACGCCCTGGTAAACTCAGTGATCGCTTTCCTCAGCCATATGCAAATGAAGCAGCAGCTAGGTTTGCTAATGGAGGAGCTTATCCTCCAGATCTAAGTCTTATTACCAAAGCCCGCCACAATGGTCAAAACTATGTATTTGCCCTTCTTACTGGTTATCGTGATCCCCCTGCTGGTGTTGCGATTAGAGAGGGATTGCACTATAATCCATATTTTCCTGGTGGAGCAATTGCCATGCCTAAGATGTTGAACGATGGTGCTGTTGAATATGAAGATGGCACCCCTGCTACAGAATCTCAGATGGGAAAAGACGTCGTGACATTCTTGTCTTGGGCCGCTGAACCTGAGATGGAAGAGAGAAAACTGATGGGTTTCAAGTGGATTTTTGTACTATCGCTGGCTCTTCTTCAAGCCGCTTATTTCCGTCGATTGAGATGGTCCGTTCTCAAGTCTCGCAAGCTGGTTCTTGATGTTGTCAACTAG 1050 0.4657 MKRPRNSPGHNRCVVSHLPPASLESSIKLHLRIYRLPFVWTEMAGGVIQQLLRRKLQSQHTTPSLLSSIITRKDDAGSTGSRSLRALALIGAGVSGFLSFATTASADEAEHGLECPSYPWPHKGILSSYDHASIRRGHQVYTQVCASCHSMSLVSYRDLVGVAYTEDEVKGMAAEIEVVDGPNDEGEMYTRPGKLSDRFPQPYANEAAARFANGGAYPPDLSLITKARHNGQNYVFALLTGYRDPPAGVAIREGLHYNPYFPGGAIAMPKMLNDGAVEYEDGTPATESQMGKDVVTFLSWAAEPEMEERKLMGFKWIFVLSLALLQAAYFRRLRWSVLKSRKLVLDVVN 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g0876 349 PRINTS Cytochrome C1 signature 216 240 IPR002326 GO:0009055|GO:0020037
Alju04g0876 349 PRINTS Cytochrome C1 signature 285 304 IPR002326 GO:0009055|GO:0020037
Alju04g0876 349 PRINTS Cytochrome C1 signature 254 265 IPR002326 GO:0009055|GO:0020037
Alju04g0876 349 PRINTS Cytochrome C1 signature 138 157 IPR002326 GO:0009055|GO:0020037
Alju04g0876 349 PRINTS Cytochrome C1 signature 118 137 IPR002326 GO:0009055|GO:0020037
Alju04g0876 349 PRINTS Cytochrome C1 signature 183 203 IPR002326 GO:0009055|GO:0020037
Alju04g0876 349 PRINTS Cytochrome C1 signature 304 319 IPR002326 GO:0009055|GO:0020037
Alju04g0876 349 PRINTS Cytochrome C1 signature 265 284 IPR002326 GO:0009055|GO:0020037
Alju04g0876 349 SUPERFAMILY Cytochrome c 113 303 IPR036909 GO:0009055|GO:0020037
Alju04g0876 349 PANTHER CYTOCHROME C1 75 347 IPR002326 GO:0009055|GO:0020037
Alju04g0876 349 FunFam Cytochrome c1, heme protein, mitochondrial 305 349 - -
Alju04g0876 349 SUPERFAMILY Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor 304 348 IPR021157 -
Alju04g0876 349 Gene3D - 109 304 IPR036909 GO:0009055|GO:0020037
Alju04g0876 349 Pfam Cytochrome C1 family 120 336 IPR002326 GO:0009055|GO:0020037
Alju04g0876 349 Gene3D - 305 348 - -
Alju04g0876 349 FunFam Cytochrome c1, heme protein 109 304 - -
Alju04g0876 349 ProSiteProfiles Cytochrome c family profile. 132 239 IPR009056 GO:0009055|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g0876 Alju-ChrAlju04 11821402 11827530 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g0876 43 349 Chloroplast and Mitochondria Gene Families AT3G27240 83.819 1.51e-180 500