Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g0861 ATGGACGGAACCCTTTCTTTAGTGCTCATAGAAGCTGTATTGATTTTGCTGGCTATAGCAATTTCTAAAGCTATCAGATTAATCTCTCCACTTGATGATAGTTGTAAAGATGTTGTTGATTCTATTCCCACGGTTTCTTCTCCTTCTCATATAGTTGCTCCTCCTGCAACCAAGTATGACGTCTTTCTTAGCTTTAGAGGGGAAGACACTCGTGACACTTTCTCAAGTTATCTCTATGAAGCACTTTGCAACGCAAACATTCATACTTTTATGGATCACAAGCTCCACAAAGGAACGCATATCGCACCAGTTCTTCTGAAAACAATAGAGGAATCGGAGATATCTTTGATTATTTTCTCCAAAGATTATGCTTCTTCAACATGGTGTATGGATGAGCTCGTTCATATTATGAAATGTAGGGATAAATACGGAAGAATTGTCATCCCTATTTTCTACCACATAGGTCCCTCAAATATTTGCAAACAGAATGGGAACTTTGGAGATGGATTTGCTAAGCTTAAGTTTAGATTTAAGCACAACCAAGAAAAAGTGCAGGAGTGGAAAAATGCATTGATCCAATCAACAAAACTATCTGGGTGGGATTCAAAGAATATCAGGCCTGAATCTAAACTTATTAAAAAGATTGTCAAAGATATCTTGACAAAATTGAATAGCAAGTCATCATTTCATGTTGAAGGATTAGTTGGGATTGATCATCAGATTCAAAAAATTAAAGAGCTACTAAGTGAAACTCGCATTGTGGGAATATGGGGCATGGGCGGTATAGGTAAGACCACTCTTGCTAGAGCTGTATTTCACAAGTTGAAAGAACAATTTGAAGTTTTCTCCTTTGTTGGAAATGTGAGAGAACAACTTGCAAAAATTGGATTAGATGAATTACAAAAAAAGTGCCTTGAAGAATTATTAAAAGATGAGGATGTTAACACTTACAATTTAAAATCCACTTTTGTGAAAAGTAGGCTTCGTCATAAAAAAATTCTTTTGATACTTGATGATGTCGATAATTCTATAGCAATTGAAGATTTAATCAAAGTATGTGATTGGTTTGGGGAAGGAAGTAGAATTATTATCACATCAAGAGACATGCAAGTGCTTAAGAATACTTTTGCATCTACAACATATCATGTTCTGCAATTGGACTCCCATCAAGCGCTTCATCTCTTTAGTTTGAAAGCTTTTAAGCAAAATAAGCCATCAAAAAGTTATCTGGAGTTATCAAAGTGGGTAGTGGATTATTGTGAAGGAAATCCATTGGCTCTAGTAGTGTTGGGCTGCTTTCTTCATGGTAGAGGAAAAGAAGAGTGGGAAAGTGCTCTGAAAAAACTTCATCAAACTCTTCACAAGGACATTTGTAATGTGTTGAAATTGAGTTTTGATGGACTTGATGACATGCAGAAGAATATATTTCTCGATCTAGCATTTTTCTTGAACGAAGCATGGGGGATTTCTCTAGAAGATTGTACAAGACGCATATATGATTCTTCTGCATATATTGAGATAAGTGTACTTAAAGAGAGATCCCTCATTTCAGTGCATGAAAATGGTGATATTGAGATGCATGCACTTCTAATGGACATGGGGCTTGAAATTTCTAGGCAACAATTAATATCTAATCCTGAAAAACCCATTCGACTATGGAGGCATGAGGATATTTATCATATTTTCCACAATGACAAGGGTGCCGAAGAAGTCCAATGCTTATCATTAGACATGAGCAAAATAAAAAGTATTACATTGACAACTAGTAATTTTCAAAAGATGTATAATTTAAAATTCCTTAAATTGTACAAGTCAGAAAGGAAGAAGCCTTCAAAAGTGAATATTTATGGAGATTTGGATTCTCTTCCTGAAGAATTGAAGTTCCTCTTTTGGGTTGATTGTCCTCTTCAATCTGTGCCATTAAACTTTTGTGCGGAGAATCTTATTCATCTTATAATGCCAAACAGTCGTCTCCAACAACTTTGGAATGGAAATCAACACTTTCCAAATTTAAAGAAGATTGATGTAACTAACTCAAAATATCTCATGGCACTTCCTGATCTATCAGAGGCCCCAAACCTTGAAAGCTTAGAGGTAGATGGTTGTGTAAATTTGGATCAAATCCATTCTTCAAATGTCCTTCGCAAGCTTACCCACTTGACTCTTGAATCCTGCAAAAGGTCAGGGCACATAAACTTTGGCGGTGGCTCTGTTAATGGGACAAGAAAATCTGGGTTAGTGACTGTCCACAATTTTTTTGATCTTAACGACTTTTCATTCACCAAAGTGACTATGAAGCTCTTGGTATCTGATGATGGCTGTGTTATCACTGGTTTTAAATTTAAACTTTTGTTAATGCCATTTGAAGAGATGTTAGAGTGCAAGGACTATATTGAGAGCGTGAAGTTAATATTATGGACACAAAGTTTGGCGTTTTTACTTCCTTTTGTTAAGGCTGTTCATTGGTCAGAGAGTCCAATTGAGTTTGGGAATTTCAAGCAATATTTTGACTGTGATCATTACTATGACTCCTACTTCTTTGGTGAGAGGATCCAAATTAAAATGAAAGAAGTGGGAGTGGAAAAGAAAGCACATAGCGTCGGCGTCTGGCCACTAATAGTAAGAGGTGATGTGGTTGATGAATATTACGAAGAAGAAGATGTGGAATGTTGCAGCAACAATGATAAGAATTATACACTAACAAGAGTGCCAAACCACGTCGCTCGCTGGTCATTGTTGACACAAGTGTCACTAAAGAAGAGTGATATTATTGGAAGTGCAGGTTTGACCATTCCTCAAGTTTGGATTTTGAGGTCACTTGCAGGATCTGAGTGTTGTGAAGGGCTTCAAACTTTGAAGGATACAAGGCTGTGTTTGGATGTTCAAACAAGCGATTGGTGTGACCGTGACTTTTGTGTATCGTATGTTCATTCCCCTGAATGGCTTAGAGACATGGCCATGGGTGCATTGTCTTTAGCCCTCTCTGTTTTTGGGACTGATATTGTCTTTTGA 3012 0.3689 MDGTLSLVLIEAVLILLAIAISKAIRLISPLDDSCKDVVDSIPTVSSPSHIVAPPATKYDVFLSFRGEDTRDTFSSYLYEALCNANIHTFMDHKLHKGTHIAPVLLKTIEESEISLIIFSKDYASSTWCMDELVHIMKCRDKYGRIVIPIFYHIGPSNICKQNGNFGDGFAKLKFRFKHNQEKVQEWKNALIQSTKLSGWDSKNIRPESKLIKKIVKDILTKLNSKSSFHVEGLVGIDHQIQKIKELLSETRIVGIWGMGGIGKTTLARAVFHKLKEQFEVFSFVGNVREQLAKIGLDELQKKCLEELLKDEDVNTYNLKSTFVKSRLRHKKILLILDDVDNSIAIEDLIKVCDWFGEGSRIIITSRDMQVLKNTFASTTYHVLQLDSHQALHLFSLKAFKQNKPSKSYLELSKWVVDYCEGNPLALVVLGCFLHGRGKEEWESALKKLHQTLHKDICNVLKLSFDGLDDMQKNIFLDLAFFLNEAWGISLEDCTRRIYDSSAYIEISVLKERSLISVHENGDIEMHALLMDMGLEISRQQLISNPEKPIRLWRHEDIYHIFHNDKGAEEVQCLSLDMSKIKSITLTTSNFQKMYNLKFLKLYKSERKKPSKVNIYGDLDSLPEELKFLFWVDCPLQSVPLNFCAENLIHLIMPNSRLQQLWNGNQHFPNLKKIDVTNSKYLMALPDLSEAPNLESLEVDGCVNLDQIHSSNVLRKLTHLTLESCKRSGHINFGGGSVNGTRKSGLVTVHNFFDLNDFSFTKVTMKLLVSDDGCVITGFKFKLLLMPFEEMLECKDYIESVKLILWTQSLAFLLPFVKAVHWSESPIEFGNFKQYFDCDHYYDSYFFGERIQIKMKEVGVEKKAHSVGVWPLIVRGDVVDEYYEEEDVECCSNNDKNYTLTRVPNHVARWSLLTQVSLKKSDIIGSAGLTIPQVWILRSLAGSECCEGLQTLKDTRLCLDVQTSDWCDRDFCVSYVHSPEWLRDMAMGALSLALSVFGTDIVF 1003
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g0861 1003 SMART till_3 58 197 IPR000157 GO:0007165
Alju04g0861 1003 SUPERFAMILY L domain-like 571 732 - -
Alju04g0861 1003 Gene3D - 387 469 IPR042197 -
Alju04g0861 1003 Gene3D - 56 230 IPR035897 -
Alju04g0861 1003 FunFam Disease resistance protein (TIR-NBS-LRR class) 55 225 - -
Alju04g0861 1003 PRINTS Disease resistance protein signature 253 268 - -
Alju04g0861 1003 PRINTS Disease resistance protein signature 666 682 - -
Alju04g0861 1003 PRINTS Disease resistance protein signature 327 341 - -
Alju04g0861 1003 PRINTS Disease resistance protein signature 420 434 - -
Alju04g0861 1003 Pfam TIR domain 58 228 IPR000157 GO:0007165
Alju04g0861 1003 SUPERFAMILY Toll/Interleukin receptor TIR domain 56 200 IPR035897 -
Alju04g0861 1003 ProSiteProfiles TIR domain profile. 57 223 IPR000157 GO:0007165
Alju04g0861 1003 Pfam NB-ARC domain 239 455 IPR002182 GO:0043531
Alju04g0861 1003 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 227 479 IPR027417 -
Alju04g0861 1003 Gene3D Ribonuclease Inhibitor 557 740 IPR032675 -
Alju04g0861 1003 SUPERFAMILY "Winged helix" DNA-binding domain 456 561 IPR036390 -
Alju04g0861 1003 SMART AAA_5 250 375 IPR003593 GO:0016887
Alju04g0861 1003 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 59 755 IPR044974 GO:0006952
Alju04g0861 1003 Gene3D - 234 386 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g0861 Alju-ChrAlju04 11023290 11026814 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g0861 59 727 WRKY Transcription Factor Family AT4G12020 29.898 1.09e-78 280