Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g0844 ATGGACAATGAGCCTCTGCTCGCGCATTACAGTCCCAGAAAGCGCCATCCACCTTCGAATCTCAGGCCTCTGGCAGAGAACAACGAAGTGGTCCTTTCTCTGAACCCATCGGAGATCAAAGACCGCCTTATCTTCGGCCCCTCCACTCCTAGAGATTCCGCCGCTTTAGTTGAAGCACTCACGTTTTCGCTTGATTCCCAAAGACAAGATTCTTCTACACACGACCTTTCTCGTACTCTCGTCGAATCACAATCTCAATTACCCCGACAATTATGCTCCACACCTTTTGTTCGTCGCTGTCAAACGGCACCGGCTATGTCTGTGATTCACGAATTCAAACACCAACCCTCTGAGCCTAATCCTCATCGTAGTTCAAATTCAATTGTTTCCCAAGCGGTTATTCTTCTTGTTGTCTATTTATCGTCGGGTGTTGCTATATACTTTTTCAATCGTCATGATTTTACTGGGATTGAGACTAACCCTGTCGTGGATGCCCTTTATTATTGTGTAGTGACAATGTGCACGATAGGATATGGTGACATTATTCCCAATAGTACAGCGACTAAGCTTTTTTCTATTCTGTTTGTGTTGGTGGGATTTGGGTTTATTGACATATTGCTGAGTGGGATGGTGAATCATGTTCTTGACTTGCAAGAGAGCCACTTGCTGAAGACAATGAAGGGTAGGGATGAGAATGACACGAGGTCTTATGTAATTGATAAGAAGAAAGGGAGAATGAGAATTAGGATGAAGGTGGCCTTTGCGTTGTTGGTTGTGGTGCTCTGTACTGGGGTTGGTGTTTGCGTGGTGCATTATGTGGAGAAGCTTGGTTGGATTGATTCTTTCTATCTTTCTGTGATGTCAGTTACGACTGTTGGATATGGTGATCGGGCATTTGAGTCGTTTGCTGGTCGTATCTTTGCTGCAATTTGGTTGCTTTTATCAACTCTTGCAGTTGCTAGGGCTTTTCTTTATTTAGCTGAGGCAAGAGTGGACAAGAGGAATAGAAGAATGGCAAAGTGGATTCTTGGTCATGATATGAGTGTTTCTGAGTTTCTTGCTGCAGACTTGGACCATAATTTCTGTGTGAGTAAATCAGAATTTGTTATCTACAAGCTCAAGGAGATGGGAAAACTATCAGAGAAAGATATCATGCTGATCGGCGAGAAGTTTGACCGGCTAGATACCCAAAAACGTGGGACAATAAGGCTAGTTAATCTCAAGGAGGCTAATCATGGATAA 1242 0.4364 MDNEPLLAHYSPRKRHPPSNLRPLAENNEVVLSLNPSEIKDRLIFGPSTPRDSAALVEALTFSLDSQRQDSSTHDLSRTLVESQSQLPRQLCSTPFVRRCQTAPAMSVIHEFKHQPSEPNPHRSSNSIVSQAVILLVVYLSSGVAIYFFNRHDFTGIETNPVVDALYYCVVTMCTIGYGDIIPNSTATKLFSILFVLVGFGFIDILLSGMVNHVLDLQESHLLKTMKGRDENDTRSYVIDKKKGRMRIRMKVAFALLVVVLCTGVGVCVVHYVEKLGWIDSFYLSVMSVTTVGYGDRAFESFAGRIFAAIWLLLSTLAVARAFLYLAEARVDKRNRRMAKWILGHDMSVSEFLAADLDHNFCVSKSEFVIYKLKEMGKLSEKDIMLIGEKFDRLDTQKRGTIRLVNLKEANHG 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g0844 413 FunFam Two-pore potassium channel 3 235 349 - -
Alju04g0844 413 SUPERFAMILY Voltage-gated potassium channels 125 213 - -
Alju04g0844 413 Gene3D - 125 223 - -
Alju04g0844 413 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 160 385 IPR003280 GO:0005267|GO:0016020|GO:0071805
Alju04g0844 413 MobiDBLite consensus disorder prediction 1 22 - -
Alju04g0844 413 Gene3D - 224 349 - -
Alju04g0844 413 Pfam Ion channel 257 327 IPR013099 -
Alju04g0844 413 Pfam Ion channel 134 211 IPR013099 -
Alju04g0844 413 SUPERFAMILY Voltage-gated potassium channels 241 347 - -
Alju04g0844 413 PRINTS Two pore domain K+ channel signature 171 199 IPR003280 GO:0005267|GO:0016020|GO:0071805
Alju04g0844 413 PRINTS Two pore domain K+ channel signature 290 299 IPR003280 GO:0005267|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g0844 Alju-ChrAlju04 10285745 10287962 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g0844 3 413 Ion Channels AT4G18160 56.744 7.87e-164 466