Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g0843 ATGTCTGATGAGCATAATAAGGAACTATACGACCAAGGCAGATCCACCATGTACTCATCATCGTTGTCTTATGATTCACAAGCTTTTGATCCTTCTTCTTACATGAGCTTAACAGAGTATCTGCAAATAGGAGCCATGGACTACAATTCACTTGCAACTTCTTTTGGTCTCTCTGAGGTTTTGATTTCTTCTACTGACCAACAAGGCAACACTCAGAAGCCATCATCAAAAGATATTGCAGATTGTGGTGTCACCGGCGCCGGAGGTGAAACTCCACTACTCACCCAGAACTCATCTCTCTCTTCCTCTTCTTCTGAACCTGGAGCTGAAGAAGAAGATTCTGGCAAGAACACTGTAGTAGACGACGATCATAACCGAGCAAAAGGAGAAGAGGAAGCAGAAAAATCTAAGAAAGGGAAGAAAGGAAAGAAGAAAGGAGAGAAGAAAGAGAAGGAGCCAAGGTTTGCTTTCATGACAAAGAGTGAGGTTGATCAGCTTGAAGATGGTTACCGTTGGAGAAAATATGGCCAGAAAGCTGTCAAAAATAGCCCTTACCCAAGGAGTTATTATAGGTGCACAACACAGAAGTGCACAGTGAAGAAACGAGTGGAGAGGTCGTTTGAGGATCCAACAACTGTGATAACAACGTACGAAGGTCAGCATAACCATCCTGTCCCCAATTCTCTCAGAGGGAATTATAATTCTGCCGCCATGTTCACTCCTTCTTCTTCCTCCTCAACTTCCTCGTCCTCTTCTTTTCTCTCTTCTCTCATGATGATCCCAACCCAGCCATTGCCTCATCATCAAGATTTGCTCCTCCTTCATGGAGCCTCCAATAATATGAATAATAATTCTCTCTATTATTCTCACAACTACGCTAATCCTAATTCTGTCCATCAGTATCGTCATCATAATTATCTTCATCAGCTTCCACTTCCCGATCAGCATCATGACAATGGCCTCCTTCAAGACTTAATCCCTTCTTCTATGTTCTTCAAACAAGAACCTCGAGAATGA 1017 0.4267 MSDEHNKELYDQGRSTMYSSSLSYDSQAFDPSSYMSLTEYLQIGAMDYNSLATSFGLSEVLISSTDQQGNTQKPSSKDIADCGVTGAGGETPLLTQNSSLSSSSSEPGAEEEDSGKNTVVDDDHNRAKGEEEAEKSKKGKKGKKKGEKKEKEPRFAFMTKSEVDQLEDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCTVKKRVERSFEDPTTVITTYEGQHNHPVPNSLRGNYNSAAMFTPSSSSSTSSSSSFLSSLMMIPTQPLPHHQDLLLLHGASNNMNNNSLYYSHNYANPNSVHQYRHHNYLHQLPLPDQHHDNGLLQDLIPSSMFFKQEPRE 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g0843 338 Pfam WRKY DNA -binding domain 167 224 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju04g0843 338 MobiDBLite consensus disorder prediction 90 108 - -
Alju04g0843 338 MobiDBLite consensus disorder prediction 64 155 - -
Alju04g0843 338 SMART WRKY_cls 166 225 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju04g0843 338 SUPERFAMILY WRKY DNA-binding domain 158 226 IPR036576 GO:0003700|GO:0006355|GO:0043565
Alju04g0843 338 ProSiteProfiles WRKY domain profile. 161 226 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju04g0843 338 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 69 249 IPR044810 GO:0003700
Alju04g0843 338 MobiDBLite consensus disorder prediction 109 138 - -
Alju04g0843 338 FunFam WRKY transcription factor 57 152 226 - -
Alju04g0843 338 MobiDBLite consensus disorder prediction 64 78 - -
Alju04g0843 338 Gene3D WRKY domain 150 227 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g0843 Alju-ChrAlju04 10243198 10245072 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g0843 28 336 WRKY Transcription Factor Family AT4G18170 45.794 8.11e-61 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Alju04g0843 WRKY 1e-25 CL0274